RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 ARHGAP5Q13017 1502 aa15.88■□□□□ 0.13
CPNE4-201ENST00000429747 SYNJ2O15056 1496 aa15.88■□□□□ 0.13
CPNE4-201ENST00000429747 IFT140Q96RY7 1462 aa15.88■□□□□ 0.13
CPNE4-201ENST00000429747 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.88■□□□□ 0.13
CPNE4-201ENST00000429747 SLFN5Q08AF3 891 aa15.87■□□□□ 0.13
CPNE4-201ENST00000429747 C14orf37Q86TY3 774 aa15.87■□□□□ 0.13
CPNE4-201ENST00000429747 TCOF1Q13428 1488 aaKnown RBP15.87■□□□□ 0.13
CPNE4-201ENST00000429747 ZBTB7CA1YPR0 619 aa15.86■□□□□ 0.13
CPNE4-201ENST00000429747 ANKRD45Q5TZF3 282 aa15.86■□□□□ 0.13
CPNE4-201ENST00000429747 SLC12A5Q9H2X9 1139 aa15.86■□□□□ 0.13
CPNE4-201ENST00000429747 MLECQ14165 292 aa15.86■□□□□ 0.13
CPNE4-201ENST00000429747 PDE3AQ14432 1141 aa15.86■□□□□ 0.13
CPNE4-201ENST00000429747 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
CPNE4-201ENST00000429747 STAC3Q96MF2 364 aa15.85■□□□□ 0.13
CPNE4-201ENST00000429747 PDZRN3Q9UPQ7 1066 aa15.85■□□□□ 0.13
CPNE4-201ENST00000429747 DUSP27Q5VZP5 1158 aa15.84■□□□□ 0.13
CPNE4-201ENST00000429747 EVC2Q86UK5 1308 aa15.84■□□□□ 0.13
CPNE4-201ENST00000429747 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
CPNE4-201ENST00000429747 GPATCH8Q9UKJ3 1502 aaKnown RBP15.84■□□□□ 0.13
CPNE4-201ENST00000429747 C22orf23Q9BZE7 217 aa15.83■□□□□ 0.12
CPNE4-201ENST00000429747 LNPKQ9C0E8 428 aa15.83■□□□□ 0.12
CPNE4-201ENST00000429747 MINK1Q8N4C8 1332 aaPredicted RBP15.83■□□□□ 0.12
CPNE4-201ENST00000429747 DNTTIP2Q5QJE6 756 aaKnown RBP15.83■□□□□ 0.12
CPNE4-201ENST00000429747 DDX19BQ9UMR2 479 aa15.83■□□□□ 0.12
CPNE4-201ENST00000429747 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
CPNE4-201ENST00000429747 GGNBP2Q9H3C7 697 aa15.83■□□□□ 0.12
CPNE4-201ENST00000429747 MAGI1Q96QZ7 1491 aaPredicted RBP15.82■□□□□ 0.12
CPNE4-201ENST00000429747 RIPK4P57078 832 aa15.82■□□□□ 0.12
CPNE4-201ENST00000429747 PLCB2Q00722 1185 aa15.82■□□□□ 0.12
CPNE4-201ENST00000429747 CALD1Q05682 793 aaKnown RBP15.82■□□□□ 0.12
CPNE4-201ENST00000429747 CHMP5Q9NZZ3 219 aa15.82■□□□□ 0.12
CPNE4-201ENST00000429747 MSNP26038 577 aaKnown RBP15.81■□□□□ 0.12
CPNE4-201ENST00000429747 CTTNBP2Q8WZ74 1663 aa15.81■□□□□ 0.12
CPNE4-201ENST00000429747 TSR2Q969E8 191 aaKnown RBP15.8■□□□□ 0.12
CPNE4-201ENST00000429747 CABP2Q9NPB3 220 aa15.8■□□□□ 0.12
CPNE4-201ENST00000429747 DDX11L8A8MPP1 907 aa15.8■□□□□ 0.12
CPNE4-201ENST00000429747 NUP153P49790 1475 aaKnown RBP15.8■□□□□ 0.12
CPNE4-201ENST00000429747 VGFO15240 615 aaPredicted RBP15.79■□□□□ 0.12
CPNE4-201ENST00000429747 RSPH6AQ9H0K4 717 aa15.79■□□□□ 0.12
CPNE4-201ENST00000429747 RALGAPBQ86X10 1494 aa15.79■□□□□ 0.12
CPNE4-201ENST00000429747 TEX14Q8IWB6 1497 aa15.79■□□□□ 0.12
CPNE4-201ENST00000429747 WWC1Q8IX03 1113 aa15.79■□□□□ 0.12
CPNE4-201ENST00000429747 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
CPNE4-201ENST00000429747 CCDC141Q6ZP82 1450 aa15.78■□□□□ 0.12
CPNE4-201ENST00000429747 EXOSC9Q06265 439 aaKnown RBP15.78■□□□□ 0.12
CPNE4-201ENST00000429747 DIAPH1O60610 1272 aaKnown RBP15.77■□□□□ 0.12
CPNE4-201ENST00000429747 RNF123Q5XPI4 1314 aa15.77■□□□□ 0.11
CPNE4-201ENST00000429747 PARD3Q8TEW0 1356 aa15.76■□□□□ 0.11
CPNE4-201ENST00000429747 PZPP20742 1482 aa15.76■□□□□ 0.11
CPNE4-201ENST00000429747 MAGI3Q5TCQ9 1506 aa15.75■□□□□ 0.11
CPNE4-201ENST00000429747 SLC4A10Q6U841 1118 aa15.75■□□□□ 0.11
CPNE4-201ENST00000429747 HAP1P54257 671 aaPredicted RBP15.75■□□□□ 0.11
CPNE4-201ENST00000429747 FOXD4L5Q5VV16 416 aaPredicted RBP15.75■□□□□ 0.11
CPNE4-201ENST00000429747 FOXD4L4Q8WXT5 416 aaPredicted RBP15.75■□□□□ 0.11
CPNE4-201ENST00000429747 DDX49Q9Y6V7 483 aaKnown RBP15.75■□□□□ 0.11
CPNE4-201ENST00000429747 PER1O15534 1290 aaPredicted RBP15.75■□□□□ 0.11
CPNE4-201ENST00000429747 AAMPQ13685 434 aa15.75■□□□□ 0.11
CPNE4-201ENST00000429747 NOL8Q76FK4 1167 aaKnown RBP15.74■□□□□ 0.11
CPNE4-201ENST00000429747 PTMSP20962 102 aa15.74■□□□□ 0.11
CPNE4-201ENST00000429747 CFAP44Q96MT7 982 aa15.74■□□□□ 0.11
CPNE4-201ENST00000429747 SPATA31E1Q6ZUB1 1445 aa15.74■□□□□ 0.11
CPNE4-201ENST00000429747 RTF1Q92541 710 aaKnown RBP15.74■□□□□ 0.11
CPNE4-201ENST00000429747 TESK2Q96S53 571 aa15.73■□□□□ 0.11
CPNE4-201ENST00000429747 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
CPNE4-201ENST00000429747 IGHDP01880 384 aa15.73■□□□□ 0.11
CPNE4-201ENST00000429747 HMOX1P09601 288 aa15.73■□□□□ 0.11
CPNE4-201ENST00000429747 LRPPRCP42704 1394 aaKnown RBP15.72■□□□□ 0.11
CPNE4-201ENST00000429747 OS9Q13438 667 aaPredicted RBP15.72■□□□□ 0.11
CPNE4-201ENST00000429747 PLEKHH2Q8IVE3 1493 aa15.72■□□□□ 0.11
CPNE4-201ENST00000429747 TRAK2O60296 914 aa15.72■□□□□ 0.11
CPNE4-201ENST00000429747 MCCP23508 829 aa15.72■□□□□ 0.11
CPNE4-201ENST00000429747 KIF16BQ96L93 1317 aa15.71■□□□□ 0.11
CPNE4-201ENST00000429747 WDR62O43379 1518 aa15.71■□□□□ 0.11
CPNE4-201ENST00000429747 AMER1Q5JTC6 1135 aaPredicted RBP15.7■□□□□ 0.1
CPNE4-201ENST00000429747 RARSP54136 660 aaKnown RBP15.7■□□□□ 0.1
CPNE4-201ENST00000429747 MVPQ14764 893 aaKnown RBP15.7■□□□□ 0.1
CPNE4-201ENST00000429747 WDR63Q8IWG1 891 aa15.7■□□□□ 0.1
CPNE4-201ENST00000429747 PRAG1Q86YV5 1406 aa15.7■□□□□ 0.1
CPNE4-201ENST00000429747 KDM6BO15054 1643 aa15.69■□□□□ 0.1
CPNE4-201ENST00000429747 ARID3AQ99856 593 aa15.69■□□□□ 0.1
CPNE4-201ENST00000429747 NOB1Q9ULX3 412 aaKnown RBP15.69■□□□□ 0.1
CPNE4-201ENST00000429747 NKTRP30414 1462 aaKnown RBP15.69■□□□□ 0.1
CPNE4-201ENST00000429747 SCAPERQ9BY12 1400 aa15.69■□□□□ 0.1
CPNE4-201ENST00000429747 LMOD3Q0VAK6 560 aa15.69■□□□□ 0.1
CPNE4-201ENST00000429747 TRIM6-TRIM34B2RNG4 842 aa15.68■□□□□ 0.1
CPNE4-201ENST00000429747 C1orf115Q9H7X2 142 aa15.68■□□□□ 0.1
CPNE4-201ENST00000429747 PLEKHH1Q9ULM0 1364 aa15.68■□□□□ 0.1
CPNE4-201ENST00000429747 KCNJ4P48050 445 aa15.68■□□□□ 0.1
CPNE4-201ENST00000429747 C8orf34Q49A92 452 aa15.68■□□□□ 0.1
CPNE4-201ENST00000429747 KIF14Q15058 1648 aa15.68■□□□□ 0.1
CPNE4-201ENST00000429747 ST18O60284 1047 aa15.67■□□□□ 0.1
CPNE4-201ENST00000429747 RAPGEF6Q8TEU7 1601 aa15.67■□□□□ 0.1
CPNE4-201ENST00000429747 NSD3Q9BZ95 1437 aa15.67■□□□□ 0.1
CPNE4-201ENST00000429747 SKOR2Q2VWA4 1001 aaPredicted RBP15.67■□□□□ 0.1
CPNE4-201ENST00000429747 HMMRO75330 724 aa15.66■□□□□ 0.1
CPNE4-201ENST00000429747 FOXD4L6Q3SYB3 417 aaPredicted RBP15.66■□□□□ 0.1
CPNE4-201ENST00000429747 FOXD4L3Q6VB84 417 aaPredicted RBP15.66■□□□□ 0.1
CPNE4-201ENST00000429747 ADGRF5Q8IZF2 1346 aa15.66■□□□□ 0.1
CPNE4-201ENST00000429747 ATF7IPQ6VMQ6 1270 aa15.66■□□□□ 0.1
CPNE4-201ENST00000429747 NINLQ9Y2I6 1382 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms