RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 LRRC7Q96NW7 1537 aa12.19□□□□□ -0.46
GABPB1-205ENST00000429662 TOM1O60784 492 aa12.19□□□□□ -0.46
GABPB1-205ENST00000429662 ZC3H13Q5T200 1668 aaKnown RBP12.19□□□□□ -0.46
GABPB1-205ENST00000429662 POTEAQ6S8J7 498 aa12.18□□□□□ -0.46
GABPB1-205ENST00000429662 IQGAP1P46940 1657 aa12.18□□□□□ -0.46
GABPB1-205ENST00000429662 C19orf67A6NJJ6 358 aa12.18□□□□□ -0.46
GABPB1-205ENST00000429662 CHADLQ6NUI6 762 aa12.18□□□□□ -0.46
GABPB1-205ENST00000429662 ATP7AQ04656 1500 aa12.17□□□□□ -0.46
GABPB1-205ENST00000429662 SYCP2Q9BX26 1530 aa12.16□□□□□ -0.46
GABPB1-205ENST00000429662 GCC2Q8IWJ2 1684 aa12.14□□□□□ -0.47
GABPB1-205ENST00000429662 NEFLP07196 543 aa12.14□□□□□ -0.47
GABPB1-205ENST00000429662 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
GABPB1-205ENST00000429662 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
GABPB1-205ENST00000429662 A2MP01023 1474 aa12.13□□□□□ -0.47
GABPB1-205ENST00000429662 ROCK1Q13464 1354 aa12.12□□□□□ -0.47
GABPB1-205ENST00000429662 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
GABPB1-205ENST00000429662 NPHP4O75161 1426 aaPredicted RBP12.1□□□□□ -0.47
GABPB1-205ENST00000429662 PZPP20742 1482 aa12.1□□□□□ -0.47
GABPB1-205ENST00000429662 CDK11AQ9UQ88 783 aaPredicted RBP12.09□□□□□ -0.47
GABPB1-205ENST00000429662 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
GABPB1-205ENST00000429662 MYT1LQ9UL68 1186 aa12.06□□□□□ -0.48
GABPB1-205ENST00000429662 GPATCH8Q9UKJ3 1502 aaKnown RBP12.06□□□□□ -0.48
GABPB1-205ENST00000429662 UGGT1Q9NYU2 1555 aa12.06□□□□□ -0.48
GABPB1-205ENST00000429662 ROBO1Q9Y6N7 1651 aa12.06□□□□□ -0.48
GABPB1-205ENST00000429662 FAM135AQ9P2D6 1515 aa12.06□□□□□ -0.48
GABPB1-205ENST00000429662 TNRQ92752 1358 aa12.05□□□□□ -0.48
GABPB1-205ENST00000429662 FBXO31Q5XUX0 539 aaPredicted RBP12.05□□□□□ -0.48
GABPB1-205ENST00000429662 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
GABPB1-205ENST00000429662 MPHOSPH9Q99550 1183 aa12.05□□□□□ -0.48
GABPB1-205ENST00000429662 TSHZ2Q9NRE2 1034 aa12.05□□□□□ -0.48
GABPB1-205ENST00000429662 FKBP8Q14318 412 aa12.05□□□□□ -0.48
GABPB1-205ENST00000429662 RRP7BPQ9NSQ0 103 aa12.05□□□□□ -0.48
GABPB1-205ENST00000429662 KDM5DQ9BY66 1539 aa12.04□□□□□ -0.48
GABPB1-205ENST00000429662 NLRP1Q9C000 1473 aa12.04□□□□□ -0.48
GABPB1-205ENST00000429662 KIAA1107Q9UPP5 1409 aa12.04□□□□□ -0.48
GABPB1-205ENST00000429662 ERICH6BQ5W0A0 696 aa12.04□□□□□ -0.48
GABPB1-205ENST00000429662 UBR1Q8IWV7 1749 aa12.04□□□□□ -0.48
GABPB1-205ENST00000429662 DAPK1P53355 1430 aa12.03□□□□□ -0.48
GABPB1-205ENST00000429662 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
GABPB1-205ENST00000429662 SPAG9O60271 1321 aaKnown RBP12.02□□□□□ -0.49
GABPB1-205ENST00000429662 GABBR2O75899 941 aa12.02□□□□□ -0.49
GABPB1-205ENST00000429662 HSPA5P11021 654 aaKnown RBP12.02□□□□□ -0.49
GABPB1-205ENST00000429662 UPF1Q92900 1129 aaKnown RBP eCLIP12.02□□□□□ -0.49
GABPB1-205ENST00000429662 HIRIP3Q9BW71 556 aaPredicted RBP12.02□□□□□ -0.49
GABPB1-205ENST00000429662 CHIC2Q9UKJ5 165 aa12.01□□□□□ -0.49
GABPB1-205ENST00000429662 RPRD2Q5VT52 1461 aaKnown RBP12.01□□□□□ -0.49
GABPB1-205ENST00000429662 MBD5Q9P267 1494 aa12.01□□□□□ -0.49
GABPB1-205ENST00000429662 LRP6O75581 1613 aa12□□□□□ -0.49
GABPB1-205ENST00000429662 ANKRD30BQ9BXX2 1392 aa12□□□□□ -0.49
GABPB1-205ENST00000429662 GGT6Q6P531 493 aa12□□□□□ -0.49
GABPB1-205ENST00000429662 ABCC5O15440 1437 aa12□□□□□ -0.49
GABPB1-205ENST00000429662 COL16A1Q07092 1604 aaPredicted RBP11.99□□□□□ -0.49
GABPB1-205ENST00000429662 HNRNPMP52272 730 aaKnown RBP eCLIP11.99□□□□□ -0.49
GABPB1-205ENST00000429662 ANKLE2Q86XL3 938 aa11.99□□□□□ -0.49
GABPB1-205ENST00000429662 EP400Q96L91 3159 aa11.99□□□□□ -0.49
GABPB1-205ENST00000429662 WASHC2AQ641Q2 1341 aa11.98□□□□□ -0.49
GABPB1-205ENST00000429662 ARHGAP23Q9P227 1491 aa11.98□□□□□ -0.49
GABPB1-205ENST00000429662 L3MBTL2Q969R5 705 aa11.97□□□□□ -0.49
GABPB1-205ENST00000429662 SLIT1O75093 1534 aa11.96□□□□□ -0.49
GABPB1-205ENST00000429662 MROH1Q8NDA8 1641 aa11.96□□□□□ -0.49
GABPB1-205ENST00000429662 PLEKHH2Q8IVE3 1493 aa11.96□□□□□ -0.5
GABPB1-205ENST00000429662 PHLPP1O60346 1717 aa11.95□□□□□ -0.5
GABPB1-205ENST00000429662 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
GABPB1-205ENST00000429662 CCDC7Q96M83 1385 aa11.95□□□□□ -0.5
GABPB1-205ENST00000429662 DHX29Q7Z478 1369 aaKnown RBP11.94□□□□□ -0.5
GABPB1-205ENST00000429662 ADGRL2O95490 1459 aa11.94□□□□□ -0.5
GABPB1-205ENST00000429662 RTEL1-TNFRSF6BF6WH68 1400 aa11.94□□□□□ -0.5
GABPB1-205ENST00000429662 SCAF11Q99590 1463 aaKnown RBP11.93□□□□□ -0.5
GABPB1-205ENST00000429662 HNRNPUQ00839 825 aaKnown RBP eCLIP11.93□□□□□ -0.5
GABPB1-205ENST00000429662 THEMISQ8N1K5 641 aaPredicted RBP11.93□□□□□ -0.5
GABPB1-205ENST00000429662 NWD1Q149M9 1564 aa11.93□□□□□ -0.5
GABPB1-205ENST00000429662 ERVK-7P63135 1459 aa11.93□□□□□ -0.5
GABPB1-205ENST00000429662 CAMSAP2Q08AD1 1489 aa11.93□□□□□ -0.5
GABPB1-205ENST00000429662 ABCC3O15438 1527 aa11.92□□□□□ -0.5
GABPB1-205ENST00000429662 CFDP1Q9UEE9 299 aaPredicted RBP11.92□□□□□ -0.5
GABPB1-205ENST00000429662 SPATA31E1Q6ZUB1 1445 aa11.91□□□□□ -0.5
GABPB1-205ENST00000429662 ANKRD30AQ9BXX3 1397 aa11.91□□□□□ -0.5
GABPB1-205ENST00000429662 SHPRHQ149N8 1683 aa11.91□□□□□ -0.5
GABPB1-205ENST00000429662 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
GABPB1-205ENST00000429662 BCANQ96GW7 911 aa11.91□□□□□ -0.5
GABPB1-205ENST00000429662 ANP32EQ9BTT0 268 aa11.91□□□□□ -0.5
GABPB1-205ENST00000429662 PRKRIP1Q9H875 184 aaPredicted RBP11.91□□□□□ -0.5
GABPB1-205ENST00000429662 TET3O43151 1660 aa11.9□□□□□ -0.5
GABPB1-205ENST00000429662 CEP152O94986 1710 aa11.9□□□□□ -0.5
GABPB1-205ENST00000429662 LTKP29376 864 aa11.9□□□□□ -0.5
GABPB1-205ENST00000429662 ZNF777Q9ULD5 760 aaPredicted RBP11.9□□□□□ -0.5
GABPB1-205ENST00000429662 CDK12Q9NYV4 1490 aaPredicted RBP11.89□□□□□ -0.51
GABPB1-205ENST00000429662 ZNF644Q9H582 1327 aaPredicted RBP11.89□□□□□ -0.51
GABPB1-205ENST00000429662 TMEM94Q12767 1356 aa11.88□□□□□ -0.51
GABPB1-205ENST00000429662 DIP2AQ14689 1571 aa11.88□□□□□ -0.51
GABPB1-205ENST00000429662 ZBED9Q6R2W3 1325 aa11.88□□□□□ -0.51
GABPB1-205ENST00000429662 CFAP65Q6ZU64 1925 aaKnown RBP11.87□□□□□ -0.51
GABPB1-205ENST00000429662 PRDM15P57071 1507 aaPredicted RBP11.87□□□□□ -0.51
GABPB1-205ENST00000429662 NBPF8Q3BBV2 869 aa11.87□□□□□ -0.51
GABPB1-205ENST00000429662 ROCK2O75116 1388 aaKnown RBP11.87□□□□□ -0.51
GABPB1-205ENST00000429662 SETBP1Q9Y6X0 1596 aa11.86□□□□□ -0.51
GABPB1-205ENST00000429662 PIK3C2BO00750 1634 aa11.86□□□□□ -0.51
GABPB1-205ENST00000429662 KDM5AP29375 1690 aaKnown RBP11.86□□□□□ -0.51
GABPB1-205ENST00000429662 JCADQ9P266 1359 aa11.86□□□□□ -0.51
GABPB1-205ENST00000429662 AHDC1Q5TGY3 1603 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms