RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 ZNF500O60304 480 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-206ENST00000429440 PDE3BQ13370 1112 aa11.23□□□□□ -0.61
CDC42BPA-206ENST00000429440 CHMP7Q8WUX9 453 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-206ENST00000429440 GZF1Q9H116 711 aaPredicted RBP11.23□□□□□ -0.61
CDC42BPA-206ENST00000429440 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
CDC42BPA-206ENST00000429440 SLKQ9H2G2 1235 aaPredicted RBP11.22□□□□□ -0.61
CDC42BPA-206ENST00000429440 VIRMAQ69YN4 1812 aaKnown RBP11.21□□□□□ -0.61
CDC42BPA-206ENST00000429440 USP19O94966 1318 aa11.21□□□□□ -0.61
CDC42BPA-206ENST00000429440 ABCA8O94911 1581 aa11.21□□□□□ -0.62
CDC42BPA-206ENST00000429440 MMP14P50281 582 aa11.2□□□□□ -0.62
CDC42BPA-206ENST00000429440 GPATCH8Q9UKJ3 1502 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-206ENST00000429440 ITSN2Q9NZM3 1697 aa11.2□□□□□ -0.62
CDC42BPA-206ENST00000429440 DDX11L8A8MPP1 907 aa11.2□□□□□ -0.62
CDC42BPA-206ENST00000429440 PNISRQ8TF01 805 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-206ENST00000429440 DNAJC2Q99543 621 aaKnown RBP11.2□□□□□ -0.62
CDC42BPA-206ENST00000429440 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-206ENST00000429440 JPH4Q96JJ6 628 aa11.19□□□□□ -0.62
CDC42BPA-206ENST00000429440 POLR1AO95602 1720 aaPredicted RBP11.19□□□□□ -0.62
CDC42BPA-206ENST00000429440 CROCC2H7BZ55 1655 aa11.19□□□□□ -0.62
CDC42BPA-206ENST00000429440 CAMSAP2Q08AD1 1489 aa11.19□□□□□ -0.62
CDC42BPA-206ENST00000429440 SKAP1Q86WV1 359 aa11.19□□□□□ -0.62
CDC42BPA-206ENST00000429440 MPHOSPH9Q99550 1183 aa11.19□□□□□ -0.62
CDC42BPA-206ENST00000429440 SASS6Q6UVJ0 657 aa11.18□□□□□ -0.62
CDC42BPA-206ENST00000429440 HOMEZQ8IX15 550 aa11.18□□□□□ -0.62
CDC42BPA-206ENST00000429440 LRPPRCP42704 1394 aaKnown RBP11.18□□□□□ -0.62
CDC42BPA-206ENST00000429440 CDC42BPAQ5VT25 1732 aa11.17□□□□□ -0.62
CDC42BPA-206ENST00000429440 CARMIL2Q6F5E8 1435 aa11.17□□□□□ -0.62
CDC42BPA-206ENST00000429440 ADGBQ8N7X0 1667 aa11.17□□□□□ -0.62
CDC42BPA-206ENST00000429440 FBLN2P98095 1184 aa11.17□□□□□ -0.62
CDC42BPA-206ENST00000429440 NOL7Q9UMY1 257 aaKnown RBP11.17□□□□□ -0.62
CDC42BPA-206ENST00000429440 ANKRD30BQ9BXX2 1392 aa11.17□□□□□ -0.62
CDC42BPA-206ENST00000429440 MCM5P33992 734 aa11.16□□□□□ -0.62
CDC42BPA-206ENST00000429440 ABCC10Q5T3U5 1492 aa11.16□□□□□ -0.62
CDC42BPA-206ENST00000429440 CRBNQ96SW2 442 aa11.16□□□□□ -0.62
CDC42BPA-206ENST00000429440 CHMP5Q9NZZ3 219 aa11.16□□□□□ -0.62
CDC42BPA-206ENST00000429440 CLGNO14967 610 aa11.15□□□□□ -0.62
CDC42BPA-206ENST00000429440 ATP10BO94823 1461 aa11.15□□□□□ -0.62
CDC42BPA-206ENST00000429440 ADGRL2O95490 1459 aa11.15□□□□□ -0.62
CDC42BPA-206ENST00000429440 PZPP20742 1482 aa11.15□□□□□ -0.62
CDC42BPA-206ENST00000429440 TEX14Q8IWB6 1497 aa11.15□□□□□ -0.62
CDC42BPA-206ENST00000429440 IRX5P78411 483 aaPredicted RBP11.15□□□□□ -0.62
CDC42BPA-206ENST00000429440 CGNQ9P2M7 1197 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-206ENST00000429440 RPRD2Q5VT52 1461 aaKnown RBP11.15□□□□□ -0.62
CDC42BPA-206ENST00000429440 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
CDC42BPA-206ENST00000429440 PTMSP20962 102 aa11.14□□□□□ -0.63
CDC42BPA-206ENST00000429440 SKOR2Q2VWA4 1001 aaPredicted RBP11.14□□□□□ -0.63
CDC42BPA-206ENST00000429440 DHX29Q7Z478 1369 aaKnown RBP11.14□□□□□ -0.63
CDC42BPA-206ENST00000429440 ARID3AQ99856 593 aa11.13□□□□□ -0.63
CDC42BPA-206ENST00000429440 GAS2L3Q86XJ1 694 aa11.13□□□□□ -0.63
CDC42BPA-206ENST00000429440 TMC1Q8TDI8 760 aa11.13□□□□□ -0.63
CDC42BPA-206ENST00000429440 CBX1P83916 185 aa11.12□□□□□ -0.63
CDC42BPA-206ENST00000429440 L3MBTL2Q969R5 705 aa11.12□□□□□ -0.63
CDC42BPA-206ENST00000429440 YY1AP1Q9H869 796 aa11.12□□□□□ -0.63
CDC42BPA-206ENST00000429440 CFDP1Q9UEE9 299 aaPredicted RBP11.12□□□□□ -0.63
CDC42BPA-206ENST00000429440 NLRP1Q9C000 1473 aa11.12□□□□□ -0.63
CDC42BPA-206ENST00000429440 CCDC144AA2RUR9 1427 aa11.12□□□□□ -0.63
CDC42BPA-206ENST00000429440 CHD1O14646 1710 aa11.11□□□□□ -0.63
CDC42BPA-206ENST00000429440 ZBTB22O15209 634 aa11.11□□□□□ -0.63
CDC42BPA-206ENST00000429440 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
CDC42BPA-206ENST00000429440 TBC1D2Q9BYX2 928 aa11.11□□□□□ -0.63
CDC42BPA-206ENST00000429440 IBTKQ9P2D0 1353 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-206ENST00000429440 NASPP49321 788 aaPredicted RBP11.11□□□□□ -0.63
CDC42BPA-206ENST00000429440 MYRIPQ8NFW9 859 aa11.11□□□□□ -0.63
CDC42BPA-206ENST00000429440 KIF7Q2M1P5 1343 aa11.11□□□□□ -0.63
CDC42BPA-206ENST00000429440 AXDND1Q5T1B0 1012 aaPredicted RBP11.1□□□□□ -0.63
CDC42BPA-206ENST00000429440 GTF2F1P35269 517 aaKnown RBP eCLIP11.1□□□□□ -0.63
CDC42BPA-206ENST00000429440 TSPYL1Q9H0U9 437 aa11.09□□□□□ -0.63
CDC42BPA-206ENST00000429440 HSP90B1P14625 803 aaKnown RBP11.09□□□□□ -0.63
CDC42BPA-206ENST00000429440 NBPF8Q3BBV2 869 aa11.09□□□□□ -0.63
CDC42BPA-206ENST00000429440 CNKSR2Q8WXI2 1034 aa11.09□□□□□ -0.63
CDC42BPA-206ENST00000429440 ZKSCAN5Q9Y2L8 839 aa11.09□□□□□ -0.63
CDC42BPA-206ENST00000429440 SHROOM2Q13796 1616 aa11.09□□□□□ -0.63
CDC42BPA-206ENST00000429440 CCDC66A2RUB6 948 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 RBM25P49756 843 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 PSEN1P49768 467 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 PRIMPOLQ96LW4 560 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 HDAC5Q9UQL6 1122 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 NINLQ9Y2I6 1382 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 SHANK2Q9UPX8 1470 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 XPCQ01831 940 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 ATP2B3Q16720 1220 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 PDLIM2Q96JY6 352 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 BRD4O60885 1362 aaPredicted RBP11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 MBD5Q9P267 1494 aa11.08□□□□□ -0.64
CDC42BPA-206ENST00000429440 ROCK2O75116 1388 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 HMGN5P82970 282 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 SPATA31E1Q6ZUB1 1445 aa11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 ZNF622Q969S3 477 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 UPF2Q9HAU5 1272 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 CDC42BPBQ9Y5S2 1711 aa11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 KCNJ4P48050 445 aa11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 TBC1D32Q96NH3 1257 aa11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 SLC4A1APQ9BWU0 796 aaKnown RBP11.07□□□□□ -0.64
CDC42BPA-206ENST00000429440 PLIN1O60240 522 aa11.06□□□□□ -0.64
CDC42BPA-206ENST00000429440 GABPB1Q06547 395 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-206ENST00000429440 ZNF710Q8N1W2 664 aa11.06□□□□□ -0.64
CDC42BPA-206ENST00000429440 ZNF777Q9ULD5 760 aaPredicted RBP11.06□□□□□ -0.64
CDC42BPA-206ENST00000429440 ZMYM3Q14202 1370 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms