RNA–Protein interactions for RNA: ENST00000429433.3

BEND3-202, Transcript of BEN domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEND3, Length 6,654 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEND3-202ENST00000429433 ZKSCAN1P17029 563 aaPredicted RBP12.83□□□□□ -0.36
BEND3-202ENST00000429433 MROH2BQ7Z745 1585 aa12.82□□□□□ -0.36
BEND3-202ENST00000429433 CCDC47Q96A33 483 aaKnown RBP12.82□□□□□ -0.36
BEND3-202ENST00000429433 ANKRD45Q5TZF3 282 aa12.82□□□□□ -0.36
BEND3-202ENST00000429433 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
BEND3-202ENST00000429433 EFCAB2Q5VUJ9 269 aa12.82□□□□□ -0.36
BEND3-202ENST00000429433 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
BEND3-202ENST00000429433 MPNDQ8N594 471 aa12.81□□□□□ -0.36
BEND3-202ENST00000429433 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
BEND3-202ENST00000429433 CDCA7LQ96GN5 454 aa12.81□□□□□ -0.36
BEND3-202ENST00000429433 CCDC66A2RUB6 948 aa12.81□□□□□ -0.36
BEND3-202ENST00000429433 AKAP17AQ02040 695 aaKnown RBP12.8□□□□□ -0.36
BEND3-202ENST00000429433 CWC15Q9P013 229 aaKnown RBP12.8□□□□□ -0.36
BEND3-202ENST00000429433 WIZO95785 1651 aa12.8□□□□□ -0.36
BEND3-202ENST00000429433 PODXL2Q9NZ53 605 aa12.8□□□□□ -0.36
BEND3-202ENST00000429433 AK7Q96M32 723 aa12.8□□□□□ -0.36
BEND3-202ENST00000429433 APAF1O14727 1248 aa12.8□□□□□ -0.36
BEND3-202ENST00000429433 TMX4Q9H1E5 349 aaPredicted RBP12.8□□□□□ -0.36
BEND3-202ENST00000429433 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
BEND3-202ENST00000429433 SYNE3Q6ZMZ3 975 aa12.8□□□□□ -0.36
BEND3-202ENST00000429433 HOMER1Q86YM7 354 aa12.8□□□□□ -0.36
BEND3-202ENST00000429433 API5Q9BZZ5 524 aaKnown RBP12.8□□□□□ -0.36
BEND3-202ENST00000429433 CCDC184Q52MB2 194 aa12.79□□□□□ -0.36
BEND3-202ENST00000429433 RILPL2Q969X0 211 aa12.79□□□□□ -0.36
BEND3-202ENST00000429433 RAPGEF2Q9Y4G8 1499 aa12.79□□□□□ -0.36
BEND3-202ENST00000429433 HSP90B2PQ58FF3 399 aa12.79□□□□□ -0.36
BEND3-202ENST00000429433 ZNF592Q92610 1267 aa12.79□□□□□ -0.36
BEND3-202ENST00000429433 MARCH6O60337 910 aa12.79□□□□□ -0.36
BEND3-202ENST00000429433 HMGN5P82970 282 aaKnown RBP12.79□□□□□ -0.36
BEND3-202ENST00000429433 PES1O00541 588 aaKnown RBP12.79□□□□□ -0.36
BEND3-202ENST00000429433 RNF20Q5VTR2 975 aa12.79□□□□□ -0.36
BEND3-202ENST00000429433 TDRD9Q8NDG6 1382 aaKnown RBP12.79□□□□□ -0.36
BEND3-202ENST00000429433 MNS1Q8NEH6 495 aa12.78□□□□□ -0.36
BEND3-202ENST00000429433 UACAQ9BZF9 1416 aa12.78□□□□□ -0.36
BEND3-202ENST00000429433 FOSBP53539 338 aa12.78□□□□□ -0.36
BEND3-202ENST00000429433 TRIM29Q14134 588 aa12.77□□□□□ -0.36
BEND3-202ENST00000429433 ERCC4Q92889 916 aaPredicted RBP12.77□□□□□ -0.36
BEND3-202ENST00000429433 LETM1O95202 739 aaPredicted RBP12.77□□□□□ -0.37
BEND3-202ENST00000429433 DHX8Q14562 1220 aaKnown RBP12.77□□□□□ -0.37
BEND3-202ENST00000429433 SASS6Q6UVJ0 657 aa12.77□□□□□ -0.37
BEND3-202ENST00000429433 CSB-PGBD3P0DP91 1061 aa12.77□□□□□ -0.37
BEND3-202ENST00000429433 INTS3Q68E01 1043 aaKnown RBP12.77□□□□□ -0.37
BEND3-202ENST00000429433 RUFY1Q96T51 708 aa12.77□□□□□ -0.37
BEND3-202ENST00000429433 TOMM22Q9NS69 142 aa12.77□□□□□ -0.37
BEND3-202ENST00000429433 NFKBIBQ15653 356 aa12.76□□□□□ -0.37
BEND3-202ENST00000429433 PANK1Q8TE04 598 aa12.76□□□□□ -0.37
BEND3-202ENST00000429433 MBD3O95983 291 aa12.76□□□□□ -0.37
BEND3-202ENST00000429433 BICD2Q8TD16 824 aa12.76□□□□□ -0.37
BEND3-202ENST00000429433 CCDC18Q5T9S5 1454 aa12.75□□□□□ -0.37
BEND3-202ENST00000429433 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
BEND3-202ENST00000429433 DZIP1LQ8IYY4 767 aaKnown RBP12.75□□□□□ -0.37
BEND3-202ENST00000429433 CCDC73Q6ZRK6 1079 aa12.75□□□□□ -0.37
BEND3-202ENST00000429433 NAT10Q9H0A0 1025 aaKnown RBP12.74□□□□□ -0.37
BEND3-202ENST00000429433 CCP110O43303 1012 aa12.74□□□□□ -0.37
BEND3-202ENST00000429433 NASPP49321 788 aaPredicted RBP12.74□□□□□ -0.37
BEND3-202ENST00000429433 DCTN1Q14203 1278 aa12.74□□□□□ -0.37
BEND3-202ENST00000429433 HSP90AB4PQ58FF6 505 aa12.74□□□□□ -0.37
BEND3-202ENST00000429433 KDM4AO75164 1064 aa12.74□□□□□ -0.37
BEND3-202ENST00000429433 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
BEND3-202ENST00000429433 MCTP1Q6DN14 999 aa12.73□□□□□ -0.37
BEND3-202ENST00000429433 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
BEND3-202ENST00000429433 PKNOX2Q96KN3 472 aa12.73□□□□□ -0.37
BEND3-202ENST00000429433 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
BEND3-202ENST00000429433 CPLX1O14810 134 aa12.73□□□□□ -0.37
BEND3-202ENST00000429433 FRAT2O75474 233 aaPredicted RBP12.72□□□□□ -0.37
BEND3-202ENST00000429433 AMPHP49418 695 aa12.72□□□□□ -0.37
BEND3-202ENST00000429433 CCDC144AA2RUR9 1427 aa12.72□□□□□ -0.37
BEND3-202ENST00000429433 KIF3BO15066 747 aa12.72□□□□□ -0.37
BEND3-202ENST00000429433 STAC3Q96MF2 364 aa12.71□□□□□ -0.37
BEND3-202ENST00000429433 MSH5O43196 834 aa12.71□□□□□ -0.37
BEND3-202ENST00000429433 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.37
BEND3-202ENST00000429433 RBM10P98175 930 aaKnown RBP12.71□□□□□ -0.38
BEND3-202ENST00000429433 MCM2P49736 904 aa12.71□□□□□ -0.38
BEND3-202ENST00000429433 LNPKQ9C0E8 428 aa12.71□□□□□ -0.38
BEND3-202ENST00000429433 NEXNQ0ZGT2 675 aa12.7□□□□□ -0.38
BEND3-202ENST00000429433 CCDC191Q8NCU4 936 aa12.7□□□□□ -0.38
BEND3-202ENST00000429433 PRM3Q9NNZ6 103 aa12.7□□□□□ -0.38
BEND3-202ENST00000429433 AKNAQ7Z591 1439 aa12.7□□□□□ -0.38
BEND3-202ENST00000429433 USP47Q96K76 1375 aa12.7□□□□□ -0.38
BEND3-202ENST00000429433 ANO2Q9NQ90 1003 aa12.7□□□□□ -0.38
BEND3-202ENST00000429433 ZNF644Q9H582 1327 aaPredicted RBP12.7□□□□□ -0.38
BEND3-202ENST00000429433 PCMTD1Q96MG8 357 aaPredicted RBP12.7□□□□□ -0.38
BEND3-202ENST00000429433 R3HCC1Q9Y3T6 440 aaKnown RBP12.7□□□□□ -0.38
BEND3-202ENST00000429433 RNF214Q8ND24 703 aa12.69□□□□□ -0.38
BEND3-202ENST00000429433 CDC45O75419 566 aa12.69□□□□□ -0.38
BEND3-202ENST00000429433 TRDNQ13061 729 aa12.69□□□□□ -0.38
BEND3-202ENST00000429433 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
BEND3-202ENST00000429433 ERC2O15083 957 aa12.69□□□□□ -0.38
BEND3-202ENST00000429433 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
BEND3-202ENST00000429433 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
BEND3-202ENST00000429433 ERCC6Q03468 1493 aa12.68□□□□□ -0.38
BEND3-202ENST00000429433 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
BEND3-202ENST00000429433 AMOTL1Q8IY63 956 aa12.68□□□□□ -0.38
BEND3-202ENST00000429433 SAFBQ15424 915 aaKnown RBP eCLIP12.68□□□□□ -0.38
BEND3-202ENST00000429433 NGDNQ8NEJ9 315 aaKnown RBP12.68□□□□□ -0.38
BEND3-202ENST00000429433 TRAK2O60296 914 aa12.67□□□□□ -0.38
BEND3-202ENST00000429433 VPS37CA5D8V6 355 aaPredicted RBP12.67□□□□□ -0.38
BEND3-202ENST00000429433 CAVIN1Q6NZI2 390 aaKnown RBP12.67□□□□□ -0.38
BEND3-202ENST00000429433 WWC1Q8IX03 1113 aa12.67□□□□□ -0.38
BEND3-202ENST00000429433 MYO6Q9UM54 1294 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms