RNA–Protein interactions for RNA: ENST00000428136.1

LRCH3-204, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 3,205 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-204ENST00000428136 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
LRCH3-204ENST00000428136 CDCA8Q53HL2 280 aa10.45□□□□□ -0.74
LRCH3-204ENST00000428136 ASXL1Q8IXJ9 1541 aa10.45□□□□□ -0.74
LRCH3-204ENST00000428136 MYOM2P54296 1465 aa10.44□□□□□ -0.74
LRCH3-204ENST00000428136 ZNF521Q96K83 1311 aa10.44□□□□□ -0.74
LRCH3-204ENST00000428136 ATP7AQ04656 1500 aa10.44□□□□□ -0.74
LRCH3-204ENST00000428136 MROH1Q8NDA8 1641 aa10.44□□□□□ -0.74
LRCH3-204ENST00000428136 SENP3-EIF4A1A0A087X0R7 540 aa10.43□□□□□ -0.74
LRCH3-204ENST00000428136 PPP2R1AP30153 589 aa10.43□□□□□ -0.74
LRCH3-204ENST00000428136 IFT172Q9UG01 1749 aa10.43□□□□□ -0.74
LRCH3-204ENST00000428136 ANP32AP39687 249 aaKnown RBP10.43□□□□□ -0.74
LRCH3-204ENST00000428136 NRXN1Q9ULB1 1477 aa10.42□□□□□ -0.74
LRCH3-204ENST00000428136 MAP3K4Q9Y6R4 1608 aa10.42□□□□□ -0.74
LRCH3-204ENST00000428136 PAK3O75914 559 aaPredicted RBP10.42□□□□□ -0.74
LRCH3-204ENST00000428136 MYO3AQ8NEV4 1616 aa10.42□□□□□ -0.74
LRCH3-204ENST00000428136 KDM5AP29375 1690 aaKnown RBP10.42□□□□□ -0.74
LRCH3-204ENST00000428136 ADAMTS8Q9UP79 889 aa10.41□□□□□ -0.74
LRCH3-204ENST00000428136 LMTK2Q8IWU2 1503 aa10.41□□□□□ -0.74
LRCH3-204ENST00000428136 EIF3AQ14152 1382 aaKnown RBP10.41□□□□□ -0.74
LRCH3-204ENST00000428136 BCL11AQ9H165 835 aa10.41□□□□□ -0.74
LRCH3-204ENST00000428136 KNSTRNQ9Y448 316 aa10.41□□□□□ -0.74
LRCH3-204ENST00000428136 AFAP1Q8N556 730 aa10.4□□□□□ -0.74
LRCH3-204ENST00000428136 BACH2Q9BYV9 841 aa10.4□□□□□ -0.74
LRCH3-204ENST00000428136 KANK1Q14678 1352 aa10.4□□□□□ -0.74
LRCH3-204ENST00000428136 PLEKHH1Q9ULM0 1364 aa10.4□□□□□ -0.74
LRCH3-204ENST00000428136 FANCAO15360 1455 aa10.4□□□□□ -0.74
LRCH3-204ENST00000428136 ABCA6Q8N139 1617 aa10.4□□□□□ -0.74
LRCH3-204ENST00000428136 TRMT2AQ8IZ69 625 aaKnown RBP10.4□□□□□ -0.74
LRCH3-204ENST00000428136 DUSP27Q5VZP5 1158 aa10.39□□□□□ -0.75
LRCH3-204ENST00000428136 EFCAB6Q5THR3 1501 aa10.39□□□□□ -0.75
LRCH3-204ENST00000428136 PDE4AP27815 886 aa10.39□□□□□ -0.75
LRCH3-204ENST00000428136 SALL2Q9Y467 1007 aaPredicted RBP10.39□□□□□ -0.75
LRCH3-204ENST00000428136 SBNO2Q9Y2G9 1366 aa10.39□□□□□ -0.75
LRCH3-204ENST00000428136 ERVK-7P63135 1459 aa10.38□□□□□ -0.75
LRCH3-204ENST00000428136 KIF1BO60333 1816 aa10.38□□□□□ -0.75
LRCH3-204ENST00000428136 SETBP1Q9Y6X0 1596 aa10.38□□□□□ -0.75
LRCH3-204ENST00000428136 KDM2BQ8NHM5 1336 aa10.38□□□□□ -0.75
LRCH3-204ENST00000428136 CRBNQ96SW2 442 aa10.37□□□□□ -0.75
LRCH3-204ENST00000428136 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
LRCH3-204ENST00000428136 KIDINS220Q9ULH0 1771 aa10.36□□□□□ -0.75
LRCH3-204ENST00000428136 PPRC1Q5VV67 1664 aaKnown RBP10.36□□□□□ -0.75
LRCH3-204ENST00000428136 ADGRL1O94910 1474 aa10.36□□□□□ -0.75
LRCH3-204ENST00000428136 WDR43Q15061 677 aaKnown RBP eCLIP10.36□□□□□ -0.75
LRCH3-204ENST00000428136 NGEFQ8N5V2 710 aa10.36□□□□□ -0.75
LRCH3-204ENST00000428136 MROH2AA6NES4 1674 aa10.36□□□□□ -0.75
LRCH3-204ENST00000428136 PLIN1O60240 522 aa10.35□□□□□ -0.75
LRCH3-204ENST00000428136 SLFN5Q08AF3 891 aa10.35□□□□□ -0.75
LRCH3-204ENST00000428136 ADGRB3O60242 1522 aa10.35□□□□□ -0.75
LRCH3-204ENST00000428136 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
LRCH3-204ENST00000428136 ZC3H13Q5T200 1668 aaKnown RBP10.34□□□□□ -0.75
LRCH3-204ENST00000428136 PRKCSHP14314 528 aaPredicted RBP10.34□□□□□ -0.75
LRCH3-204ENST00000428136 UGGT1Q9NYU2 1555 aa10.34□□□□□ -0.75
LRCH3-204ENST00000428136 DEKP35659 375 aaKnown RBP10.33□□□□□ -0.76
LRCH3-204ENST00000428136 C20orf194Q5TEA3 1177 aa10.33□□□□□ -0.76
LRCH3-204ENST00000428136 CENPQQ7L2Z9 268 aaPredicted RBP10.33□□□□□ -0.76
LRCH3-204ENST00000428136 USP32Q8NFA0 1604 aa10.32□□□□□ -0.76
LRCH3-204ENST00000428136 KIF3BO15066 747 aa10.32□□□□□ -0.76
LRCH3-204ENST00000428136 ADGRF5Q8IZF2 1346 aa10.32□□□□□ -0.76
LRCH3-204ENST00000428136 POLR3AO14802 1390 aaPredicted RBP10.32□□□□□ -0.76
LRCH3-204ENST00000428136 CARD14Q9BXL6 1004 aa10.32□□□□□ -0.76
LRCH3-204ENST00000428136 NKTRP30414 1462 aaKnown RBP10.32□□□□□ -0.76
LRCH3-204ENST00000428136 PPLO60437 1756 aa10.32□□□□□ -0.76
LRCH3-204ENST00000428136 CFAP70Q5T0N1 1121 aa10.31□□□□□ -0.76
LRCH3-204ENST00000428136 ZNF518AQ6AHZ1 1483 aa10.31□□□□□ -0.76
LRCH3-204ENST00000428136 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.31□□□□□ -0.76
LRCH3-204ENST00000428136 ASXL2Q76L83 1435 aa10.31□□□□□ -0.76
LRCH3-204ENST00000428136 ADGRB1O14514 1584 aa10.31□□□□□ -0.76
LRCH3-204ENST00000428136 SHPRHQ149N8 1683 aa10.3□□□□□ -0.76
LRCH3-204ENST00000428136 CFAP74Q9C0B2 1584 aa10.3□□□□□ -0.76
LRCH3-204ENST00000428136 FRMPD1Q5SYB0 1578 aa10.3□□□□□ -0.76
LRCH3-204ENST00000428136 MLH3Q9UHC1 1453 aa10.29□□□□□ -0.76
LRCH3-204ENST00000428136 E9PSI1 815 aa10.29□□□□□ -0.76
LRCH3-204ENST00000428136 USP35Q9P2H5 1018 aa10.29□□□□□ -0.76
LRCH3-204ENST00000428136 PUS7Q96PZ0 661 aaKnown RBP10.28□□□□□ -0.76
LRCH3-204ENST00000428136 NINLQ9Y2I6 1382 aa10.28□□□□□ -0.76
LRCH3-204ENST00000428136 SPINK5Q9NQ38 1064 aaPredicted RBP10.28□□□□□ -0.76
LRCH3-204ENST00000428136 QRICH2Q9H0J4 1663 aa10.28□□□□□ -0.76
LRCH3-204ENST00000428136 HECW2Q9P2P5 1572 aa10.28□□□□□ -0.76
LRCH3-204ENST00000428136 RPGRIP1LQ68CZ1 1315 aa10.28□□□□□ -0.76
LRCH3-204ENST00000428136 NBR1Q14596 966 aa10.28□□□□□ -0.76
LRCH3-204ENST00000428136 NCBP3Q53F19 620 aaKnown RBP10.28□□□□□ -0.76
LRCH3-204ENST00000428136 DDRGK1Q96HY6 314 aa10.28□□□□□ -0.76
LRCH3-204ENST00000428136 C14orf93Q9H972 538 aaKnown RBP10.28□□□□□ -0.76
LRCH3-204ENST00000428136 NOS1P29475 1434 aa10.27□□□□□ -0.76
LRCH3-204ENST00000428136 NPATQ14207 1427 aa10.27□□□□□ -0.77
LRCH3-204ENST00000428136 APAF1O14727 1248 aa10.27□□□□□ -0.77
LRCH3-204ENST00000428136 IQSEC2Q5JU85 1478 aa10.27□□□□□ -0.77
LRCH3-204ENST00000428136 POGZQ7Z3K3 1410 aa10.27□□□□□ -0.77
LRCH3-204ENST00000428136 PIK3C2BO00750 1634 aa10.26□□□□□ -0.77
LRCH3-204ENST00000428136 PHF23Q9BUL5 403 aaPredicted RBP10.26□□□□□ -0.77
LRCH3-204ENST00000428136 CENPJQ9HC77 1338 aaPredicted RBP10.26□□□□□ -0.77
LRCH3-204ENST00000428136 PDE3AQ14432 1141 aa10.25□□□□□ -0.77
LRCH3-204ENST00000428136 CCDC146Q8IYE0 955 aa10.25□□□□□ -0.77
LRCH3-204ENST00000428136 FAM161AQ3B820 660 aa10.25□□□□□ -0.77
LRCH3-204ENST00000428136 C8orf34Q49A92 452 aa10.25□□□□□ -0.77
LRCH3-204ENST00000428136 ABCC3O15438 1527 aa10.25□□□□□ -0.77
LRCH3-204ENST00000428136 PPM1GO15355 546 aaPredicted RBP10.24□□□□□ -0.77
LRCH3-204ENST00000428136 NPM2Q86SE8 214 aaKnown RBP10.24□□□□□ -0.77
LRCH3-204ENST00000428136 VIRMAQ69YN4 1812 aaKnown RBP10.24□□□□□ -0.77
LRCH3-204ENST00000428136 RTL5Q5HYW3 569 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms