RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SYNMO15061 1565 aa13.96□□□□□ -0.18
RFX3-AS1-202ENST00000427722 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
RFX3-AS1-202ENST00000427722 SCAF11Q99590 1463 aaKnown RBP13.94□□□□□ -0.18
RFX3-AS1-202ENST00000427722 NAIPQ13075 1403 aa13.94□□□□□ -0.18
RFX3-AS1-202ENST00000427722 IDI1Q13907 227 aa13.94□□□□□ -0.18
RFX3-AS1-202ENST00000427722 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
RFX3-AS1-202ENST00000427722 TET3O43151 1660 aa13.94□□□□□ -0.18
RFX3-AS1-202ENST00000427722 PIK3C2BO00750 1634 aa13.93□□□□□ -0.18
RFX3-AS1-202ENST00000427722 MED14O60244 1454 aa13.93□□□□□ -0.18
RFX3-AS1-202ENST00000427722 ARHGAP23Q9P227 1491 aa13.93□□□□□ -0.18
RFX3-AS1-202ENST00000427722 ADGRB3O60242 1522 aa13.92□□□□□ -0.18
RFX3-AS1-202ENST00000427722 IQGAP3Q86VI3 1631 aa13.92□□□□□ -0.18
RFX3-AS1-202ENST00000427722 TMEM2Q9UHN6 1383 aa13.92□□□□□ -0.18
RFX3-AS1-202ENST00000427722 POLR1AO95602 1720 aaPredicted RBP13.92□□□□□ -0.18
RFX3-AS1-202ENST00000427722 UBR1Q8IWV7 1749 aa13.92□□□□□ -0.18
RFX3-AS1-202ENST00000427722 HFM1A2PYH4 1435 aa13.91□□□□□ -0.18
RFX3-AS1-202ENST00000427722 SLIT1O75093 1534 aa13.91□□□□□ -0.18
RFX3-AS1-202ENST00000427722 TXNDC2Q86VQ3 553 aa13.91□□□□□ -0.18
RFX3-AS1-202ENST00000427722 SLC52A1Q9NWF4 448 aa13.91□□□□□ -0.18
RFX3-AS1-202ENST00000427722 LTKP29376 864 aa13.9□□□□□ -0.18
RFX3-AS1-202ENST00000427722 EID1Q9Y6B2 187 aa13.9□□□□□ -0.18
RFX3-AS1-202ENST00000427722 IQGAP1P46940 1657 aa13.88□□□□□ -0.19
RFX3-AS1-202ENST00000427722 GCC2Q8IWJ2 1684 aa13.88□□□□□ -0.19
RFX3-AS1-202ENST00000427722 CHGAP10645 457 aaKnown RBP13.87□□□□□ -0.19
RFX3-AS1-202ENST00000427722 CFAP65Q6ZU64 1925 aaKnown RBP13.87□□□□□ -0.19
RFX3-AS1-202ENST00000427722 E9PCH4 1651 aa13.87□□□□□ -0.19
RFX3-AS1-202ENST00000427722 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
RFX3-AS1-202ENST00000427722 CPS1P31327 1500 aa13.85□□□□□ -0.19
RFX3-AS1-202ENST00000427722 TRIM52Q96A61 297 aa13.85□□□□□ -0.19
RFX3-AS1-202ENST00000427722 SPDYE2BA6NHP3 402 aa13.84□□□□□ -0.19
RFX3-AS1-202ENST00000427722 SPDYE6P0CI01 402 aa13.84□□□□□ -0.19
RFX3-AS1-202ENST00000427722 SPDYE2Q495Y8 402 aa13.84□□□□□ -0.19
RFX3-AS1-202ENST00000427722 KDM5AP29375 1690 aaKnown RBP13.84□□□□□ -0.19
RFX3-AS1-202ENST00000427722 RIMS2Q9UQ26 1411 aa13.83□□□□□ -0.2
RFX3-AS1-202ENST00000427722 PPP1R15AO75807 674 aaPredicted RBP13.83□□□□□ -0.2
RFX3-AS1-202ENST00000427722 POTEHQ6S545 545 aa13.83□□□□□ -0.2
RFX3-AS1-202ENST00000427722 ZFYVE9O95405 1425 aa13.82□□□□□ -0.2
RFX3-AS1-202ENST00000427722 UBAP1LF5GYI3 381 aa13.82□□□□□ -0.2
RFX3-AS1-202ENST00000427722 BCANQ96GW7 911 aa13.82□□□□□ -0.2
RFX3-AS1-202ENST00000427722 REM2Q8IYK8 340 aaPredicted RBP13.81□□□□□ -0.2
RFX3-AS1-202ENST00000427722 TMEM131LA2VDJ0 1609 aa13.81□□□□□ -0.2
RFX3-AS1-202ENST00000427722 NUTM2DQ5VT03 806 aaPredicted RBP13.8□□□□□ -0.2
RFX3-AS1-202ENST00000427722 SLC26A8Q96RN1 970 aa13.8□□□□□ -0.2
RFX3-AS1-202ENST00000427722 PLEKHG1Q9ULL1 1385 aa13.79□□□□□ -0.2
RFX3-AS1-202ENST00000427722 TRPM2O94759 1503 aa13.79□□□□□ -0.2
RFX3-AS1-202ENST00000427722 HDGFP51858 240 aaKnown RBP13.78□□□□□ -0.2
RFX3-AS1-202ENST00000427722 LRRC7Q96NW7 1537 aa13.78□□□□□ -0.2
RFX3-AS1-202ENST00000427722 CHRDL2Q6WN34 429 aa13.77□□□□□ -0.21
RFX3-AS1-202ENST00000427722 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.77□□□□□ -0.21
RFX3-AS1-202ENST00000427722 SPHKAPQ2M3C7 1700 aa13.76□□□□□ -0.21
RFX3-AS1-202ENST00000427722 ZNF326Q5BKZ1 582 aaKnown RBP13.75□□□□□ -0.21
RFX3-AS1-202ENST00000427722 SETD5Q9C0A6 1442 aa13.74□□□□□ -0.21
RFX3-AS1-202ENST00000427722 PIP4K2BP78356 416 aa13.74□□□□□ -0.21
RFX3-AS1-202ENST00000427722 CLTCL1P53675 1640 aa13.74□□□□□ -0.21
RFX3-AS1-202ENST00000427722 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
RFX3-AS1-202ENST00000427722 TOM1O60784 492 aa13.73□□□□□ -0.21
RFX3-AS1-202ENST00000427722 KCNA6P17658 529 aa13.73□□□□□ -0.21
RFX3-AS1-202ENST00000427722 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
RFX3-AS1-202ENST00000427722 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
RFX3-AS1-202ENST00000427722 TMEM94Q12767 1356 aa13.72□□□□□ -0.21
RFX3-AS1-202ENST00000427722 NKTRP30414 1462 aaKnown RBP13.72□□□□□ -0.21
RFX3-AS1-202ENST00000427722 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.21
RFX3-AS1-202ENST00000427722 MPHOSPH9Q99550 1183 aa13.71□□□□□ -0.21
RFX3-AS1-202ENST00000427722 MYO5BQ9ULV0 1848 aa13.71□□□□□ -0.22
RFX3-AS1-202ENST00000427722 NWD1Q149M9 1564 aa13.71□□□□□ -0.22
RFX3-AS1-202ENST00000427722 RBM33Q96EV2 1170 aaKnown RBP13.7□□□□□ -0.22
RFX3-AS1-202ENST00000427722 PROSER2Q86WR7 435 aaPredicted RBP13.69□□□□□ -0.22
RFX3-AS1-202ENST00000427722 TBX22Q9Y458 520 aa13.69□□□□□ -0.22
RFX3-AS1-202ENST00000427722 CCDC144AA2RUR9 1427 aa13.69□□□□□ -0.22
RFX3-AS1-202ENST00000427722 DIP2AQ14689 1571 aa13.68□□□□□ -0.22
RFX3-AS1-202ENST00000427722 NEXMIFQ5QGS0 1516 aa13.68□□□□□ -0.22
RFX3-AS1-202ENST00000427722 ALKQ9UM73 1620 aa13.68□□□□□ -0.22
RFX3-AS1-202ENST00000427722 SSUH2Q9Y2M2 353 aa13.67□□□□□ -0.22
RFX3-AS1-202ENST00000427722 SETBP1Q9Y6X0 1596 aa13.66□□□□□ -0.22
RFX3-AS1-202ENST00000427722 ACIN1Q9UKV3 1341 aaKnown RBP13.66□□□□□ -0.22
RFX3-AS1-202ENST00000427722 HSPA1LP34931 641 aa13.66□□□□□ -0.22
RFX3-AS1-202ENST00000427722 PIK3R4Q99570 1358 aa13.65□□□□□ -0.22
RFX3-AS1-202ENST00000427722 MSH6P52701 1360 aa13.64□□□□□ -0.23
RFX3-AS1-202ENST00000427722 PTPRUQ92729 1446 aa13.64□□□□□ -0.23
RFX3-AS1-202ENST00000427722 METP08581 1390 aa13.63□□□□□ -0.23
RFX3-AS1-202ENST00000427722 PITPNM1O00562 1244 aa13.63□□□□□ -0.23
RFX3-AS1-202ENST00000427722 C14orf37Q86TY3 774 aa13.63□□□□□ -0.23
RFX3-AS1-202ENST00000427722 NRXN3Q9Y4C0 1643 aa13.63□□□□□ -0.23
RFX3-AS1-202ENST00000427722 RPGRIP1LQ68CZ1 1315 aa13.63□□□□□ -0.23
RFX3-AS1-202ENST00000427722 VGFO15240 615 aaPredicted RBP13.62□□□□□ -0.23
RFX3-AS1-202ENST00000427722 RGL3Q3MIN7 710 aa13.62□□□□□ -0.23
RFX3-AS1-202ENST00000427722 AMOTL2Q9Y2J4 779 aa13.62□□□□□ -0.23
RFX3-AS1-202ENST00000427722 SPATA31E1Q6ZUB1 1445 aa13.62□□□□□ -0.23
RFX3-AS1-202ENST00000427722 KIF1BO60333 1816 aa13.6□□□□□ -0.23
RFX3-AS1-202ENST00000427722 DISP3Q9P2K9 1392 aa13.58□□□□□ -0.23
RFX3-AS1-202ENST00000427722 XIRP1Q702N8 1843 aaKnown RBP13.58□□□□□ -0.24
RFX3-AS1-202ENST00000427722 ADGRF5Q8IZF2 1346 aa13.58□□□□□ -0.24
RFX3-AS1-202ENST00000427722 NCOA3Q9Y6Q9 1424 aa13.57□□□□□ -0.24
RFX3-AS1-202ENST00000427722 XRN1Q8IZH2 1706 aaKnown RBP13.57□□□□□ -0.24
RFX3-AS1-202ENST00000427722 CHD2O14647 1828 aaKnown RBP13.57□□□□□ -0.24
RFX3-AS1-202ENST00000427722 ANKRD30BQ9BXX2 1392 aa13.57□□□□□ -0.24
RFX3-AS1-202ENST00000427722 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
RFX3-AS1-202ENST00000427722 ATF3P18847 181 aa13.55□□□□□ -0.24
RFX3-AS1-202ENST00000427722 HRCP23327 699 aa13.55□□□□□ -0.24
RFX3-AS1-202ENST00000427722 CADPS2Q86UW7 1296 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms