RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 PRAM1Q96QH2 718 aa17.45■□□□□ 0.38
RPL28-202ENST00000426763 CAMSAP2Q08AD1 1489 aa17.45■□□□□ 0.38
RPL28-202ENST00000426763 ANKLE2Q86XL3 938 aa17.44■□□□□ 0.38
RPL28-202ENST00000426763 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
RPL28-202ENST00000426763 APAF1O14727 1248 aa17.44■□□□□ 0.38
RPL28-202ENST00000426763 NLRP6P59044 892 aa17.43■□□□□ 0.38
RPL28-202ENST00000426763 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
RPL28-202ENST00000426763 ERBINQ96RT1 1412 aa17.42■□□□□ 0.38
RPL28-202ENST00000426763 TPRNQ4KMQ1 711 aa17.42■□□□□ 0.38
RPL28-202ENST00000426763 RAPGEF4Q8WZA2 1011 aa17.42■□□□□ 0.38
RPL28-202ENST00000426763 ESCO1Q5FWF5 840 aa17.41■□□□□ 0.38
RPL28-202ENST00000426763 ANKRD30BQ9BXX2 1392 aa17.41■□□□□ 0.38
RPL28-202ENST00000426763 RIPK4P57078 832 aa17.41■□□□□ 0.38
RPL28-202ENST00000426763 CNTLNQ9NXG0 1405 aa17.41■□□□□ 0.38
RPL28-202ENST00000426763 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
RPL28-202ENST00000426763 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
RPL28-202ENST00000426763 NBPF1Q3BBV0 1214 aa17.4■□□□□ 0.38
RPL28-202ENST00000426763 NUTM2GQ5VZR2 741 aa17.39■□□□□ 0.37
RPL28-202ENST00000426763 ZBED9Q6R2W3 1325 aa17.39■□□□□ 0.37
RPL28-202ENST00000426763 ZKSCAN2Q63HK3 967 aa17.38■□□□□ 0.37
RPL28-202ENST00000426763 ABTB2Q8N961 1025 aa17.38■□□□□ 0.37
RPL28-202ENST00000426763 PTPN23Q9H3S7 1636 aa17.38■□□□□ 0.37
RPL28-202ENST00000426763 NLRP2Q9NX02 1062 aa17.37■□□□□ 0.37
RPL28-202ENST00000426763 ISY1Q9ULR0 285 aaKnown RBP17.37■□□□□ 0.37
RPL28-202ENST00000426763 TCERG1O14776 1098 aaKnown RBP17.37■□□□□ 0.37
RPL28-202ENST00000426763 NAIPQ13075 1403 aa17.37■□□□□ 0.37
RPL28-202ENST00000426763 NEXNQ0ZGT2 675 aa17.37■□□□□ 0.37
RPL28-202ENST00000426763 G3V3G9 751 aa17.36■□□□□ 0.37
RPL28-202ENST00000426763 DCAF8Q5TAQ9 597 aa17.36■□□□□ 0.37
RPL28-202ENST00000426763 BCL2L13Q9BXK5 485 aa17.36■□□□□ 0.37
RPL28-202ENST00000426763 TRIM6-TRIM34B2RNG4 842 aa17.36■□□□□ 0.37
RPL28-202ENST00000426763 EIF2S2P20042 333 aaKnown RBP17.36■□□□□ 0.37
RPL28-202ENST00000426763 SYTL4Q96C24 671 aaPredicted RBP17.36■□□□□ 0.37
RPL28-202ENST00000426763 ABCC5O15440 1437 aa17.35■□□□□ 0.37
RPL28-202ENST00000426763 CDK19Q9BWU1 502 aa17.35■□□□□ 0.37
RPL28-202ENST00000426763 DENND4BO75064 1496 aaPredicted RBP17.35■□□□□ 0.37
RPL28-202ENST00000426763 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
RPL28-202ENST00000426763 HMOX1P09601 288 aa17.34■□□□□ 0.37
RPL28-202ENST00000426763 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
RPL28-202ENST00000426763 FANCAO15360 1455 aa17.34■□□□□ 0.37
RPL28-202ENST00000426763 GOLGA6L4A6NEF3 574 aa17.34■□□□□ 0.37
RPL28-202ENST00000426763 WASHC2AQ641Q2 1341 aa17.33■□□□□ 0.37
RPL28-202ENST00000426763 GNAI1P63096 354 aa17.33■□□□□ 0.37
RPL28-202ENST00000426763 TRIM44Q96DX7 344 aaPredicted RBP17.33■□□□□ 0.37
RPL28-202ENST00000426763 NOP58Q9Y2X3 529 aaKnown RBP17.33■□□□□ 0.36
RPL28-202ENST00000426763 NBPF8Q3BBV2 869 aa17.32■□□□□ 0.36
RPL28-202ENST00000426763 RTEL1-TNFRSF6BF6WH68 1400 aa17.32■□□□□ 0.36
RPL28-202ENST00000426763 DDX58O95786 925 aaKnown RBP17.32■□□□□ 0.36
RPL28-202ENST00000426763 MTHFSP49914 203 aa17.32■□□□□ 0.36
RPL28-202ENST00000426763 AKNAQ7Z591 1439 aa17.31■□□□□ 0.36
RPL28-202ENST00000426763 FRAT2O75474 233 aaPredicted RBP17.31■□□□□ 0.36
RPL28-202ENST00000426763 API5Q9BZZ5 524 aaKnown RBP17.31■□□□□ 0.36
RPL28-202ENST00000426763 TSPYL4Q9UJ04 414 aa17.31■□□□□ 0.36
RPL28-202ENST00000426763 MSH5O43196 834 aa17.3■□□□□ 0.36
RPL28-202ENST00000426763 BRD4O60885 1362 aaPredicted RBP17.3■□□□□ 0.36
RPL28-202ENST00000426763 CABP1Q9NZU7 370 aa17.29■□□□□ 0.36
RPL28-202ENST00000426763 PTMAP06454 111 aaKnown RBP17.29■□□□□ 0.36
RPL28-202ENST00000426763 C9orf78Q9NZ63 289 aaPredicted RBP17.29■□□□□ 0.36
RPL28-202ENST00000426763 GNL2Q13823 731 aaKnown RBP17.29■□□□□ 0.36
RPL28-202ENST00000426763 SLC12A5Q9H2X9 1139 aa17.29■□□□□ 0.36
RPL28-202ENST00000426763 TULP1O00294 542 aaPredicted RBP17.28■□□□□ 0.36
RPL28-202ENST00000426763 RRP1P56182 461 aaKnown RBP17.28■□□□□ 0.36
RPL28-202ENST00000426763 PPP6R1Q9UPN7 881 aa17.28■□□□□ 0.36
RPL28-202ENST00000426763 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
RPL28-202ENST00000426763 ATAD2Q6PL18 1390 aa17.27■□□□□ 0.36
RPL28-202ENST00000426763 NECTIN2Q92692 538 aa17.27■□□□□ 0.36
RPL28-202ENST00000426763 RAPGEF6Q8TEU7 1601 aa17.27■□□□□ 0.35
RPL28-202ENST00000426763 GAS2L2Q8NHY3 880 aa17.26■□□□□ 0.35
RPL28-202ENST00000426763 PPP2R1AP30153 589 aa17.26■□□□□ 0.35
RPL28-202ENST00000426763 MFAP1P55081 439 aaKnown RBP17.26■□□□□ 0.35
RPL28-202ENST00000426763 DDX19BQ9UMR2 479 aa17.26■□□□□ 0.35
RPL28-202ENST00000426763 FKBP5Q13451 457 aaPredicted RBP17.25■□□□□ 0.35
RPL28-202ENST00000426763 PLIN1O60240 522 aa17.25■□□□□ 0.35
RPL28-202ENST00000426763 SPRYD3Q8NCJ5 442 aa17.25■□□□□ 0.35
RPL28-202ENST00000426763 NCOA1Q15788 1441 aa17.25■□□□□ 0.35
RPL28-202ENST00000426763 PLEKHO1Q53GL0 409 aaPredicted RBP17.24■□□□□ 0.35
RPL28-202ENST00000426763 COG6Q9Y2V7 657 aa17.24■□□□□ 0.35
RPL28-202ENST00000426763 CENPQQ7L2Z9 268 aaPredicted RBP17.24■□□□□ 0.35
RPL28-202ENST00000426763 THOC2Q8NI27 1593 aaKnown RBP17.24■□□□□ 0.35
RPL28-202ENST00000426763 DZIP1LQ8IYY4 767 aaKnown RBP17.24■□□□□ 0.35
RPL28-202ENST00000426763 KIF16BQ96L93 1317 aa17.24■□□□□ 0.35
RPL28-202ENST00000426763 ASXL2Q76L83 1435 aa17.23■□□□□ 0.35
RPL28-202ENST00000426763 ADAMTS12P58397 1594 aa17.22■□□□□ 0.35
RPL28-202ENST00000426763 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
RPL28-202ENST00000426763 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
RPL28-202ENST00000426763 ATP10BO94823 1461 aa17.22■□□□□ 0.35
RPL28-202ENST00000426763 DHX29Q7Z478 1369 aaKnown RBP17.22■□□□□ 0.35
RPL28-202ENST00000426763 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
RPL28-202ENST00000426763 CRBNQ96SW2 442 aa17.21■□□□□ 0.35
RPL28-202ENST00000426763 PRKAR2BP31323 418 aa17.2■□□□□ 0.34
RPL28-202ENST00000426763 PLCB2Q00722 1185 aa17.2■□□□□ 0.34
RPL28-202ENST00000426763 GPATCH8Q9UKJ3 1502 aaKnown RBP17.2■□□□□ 0.34
RPL28-202ENST00000426763 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
RPL28-202ENST00000426763 USP35Q9P2H5 1018 aa17.2■□□□□ 0.34
RPL28-202ENST00000426763 TCP11L2Q8N4U5 519 aa17.2■□□□□ 0.34
RPL28-202ENST00000426763 STRN4Q9NRL3 753 aa17.2■□□□□ 0.34
RPL28-202ENST00000426763 KIF21AQ7Z4S6 1674 aa17.2■□□□□ 0.34
RPL28-202ENST00000426763 PLCH2O75038 1416 aa17.19■□□□□ 0.34
RPL28-202ENST00000426763 GOLGA6L6A8MZA4 724 aa17.19■□□□□ 0.34
RPL28-202ENST00000426763 HSP90B1P14625 803 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms