RNA–Protein interactions for RNA: ENST00000425970.5

GARNL3-203, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-203ENST00000425970 SCRIBQ14160 1630 aa8.52□□□□□ -1.05
GARNL3-203ENST00000425970 IRX2Q9BZI1 471 aaPredicted RBP8.52□□□□□ -1.05
GARNL3-203ENST00000425970 ZCCHC6Q5VYS8 1495 aaKnown RBP8.51□□□□□ -1.05
GARNL3-203ENST00000425970 TJAP1Q5JTD0 557 aa8.51□□□□□ -1.05
GARNL3-203ENST00000425970 ADGRG1Q9Y653 693 aa8.51□□□□□ -1.05
GARNL3-203ENST00000425970 APLP1P51693 650 aa8.5□□□□□ -1.05
GARNL3-203ENST00000425970 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
GARNL3-203ENST00000425970 CECR2Q9BXF3 1484 aa8.49□□□□□ -1.05
GARNL3-203ENST00000425970 OATP04181 439 aa8.48□□□□□ -1.05
GARNL3-203ENST00000425970 HIC1Q14526 733 aa8.48□□□□□ -1.05
GARNL3-203ENST00000425970 RCCD1A6NED2 376 aa8.47□□□□□ -1.05
GARNL3-203ENST00000425970 COPS2P61201 443 aa8.47□□□□□ -1.05
GARNL3-203ENST00000425970 FAM161AQ3B820 660 aa8.47□□□□□ -1.05
GARNL3-203ENST00000425970 RBM26Q5T8P6 1007 aaKnown RBP8.47□□□□□ -1.05
GARNL3-203ENST00000425970 TMEM134Q9H6X4 195 aa8.47□□□□□ -1.05
GARNL3-203ENST00000425970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.46□□□□□ -1.06
GARNL3-203ENST00000425970 TULP1O00294 542 aaPredicted RBP8.46□□□□□ -1.06
GARNL3-203ENST00000425970 GGCXP38435 758 aa8.46□□□□□ -1.06
GARNL3-203ENST00000425970 KMT5BQ4FZB7 885 aa8.46□□□□□ -1.06
GARNL3-203ENST00000425970 RSPH4AQ5TD94 716 aa8.46□□□□□ -1.06
GARNL3-203ENST00000425970 PCDHB3Q9Y5E6 796 aa8.46□□□□□ -1.06
GARNL3-203ENST00000425970 ZNF516Q92618 1163 aa8.44□□□□□ -1.06
GARNL3-203ENST00000425970 GNPATO15228 680 aa8.43□□□□□ -1.06
GARNL3-203ENST00000425970 PPP1R18Q6NYC8 613 aa8.42□□□□□ -1.06
GARNL3-203ENST00000425970 VSIG10Q8N0Z9 540 aa8.42□□□□□ -1.06
GARNL3-203ENST00000425970 CFHP08603 1231 aa8.41□□□□□ -1.06
GARNL3-203ENST00000425970 PXYLP1Q8TE99 480 aa8.41□□□□□ -1.06
GARNL3-203ENST00000425970 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
GARNL3-203ENST00000425970 KDM2AQ9Y2K7 1162 aa8.41□□□□□ -1.06
GARNL3-203ENST00000425970 ZPR1O75312 459 aa8.4□□□□□ -1.06
GARNL3-203ENST00000425970 METTL3Q86U44 580 aaKnown RBP8.4□□□□□ -1.06
GARNL3-203ENST00000425970 GPIHBP1Q8IV16 184 aa8.4□□□□□ -1.06
GARNL3-203ENST00000425970 BLOC1S3Q6QNY0 202 aa8.39□□□□□ -1.07
GARNL3-203ENST00000425970 PRKD2Q9BZL6 878 aa8.39□□□□□ -1.07
GARNL3-203ENST00000425970 ACTN4O43707 911 aaKnown RBP8.38□□□□□ -1.07
GARNL3-203ENST00000425970 NKX2-3Q8TAU0 364 aa8.38□□□□□ -1.07
GARNL3-203ENST00000425970 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
GARNL3-203ENST00000425970 TMUB1Q9BVT8 246 aa8.37□□□□□ -1.07
GARNL3-203ENST00000425970 NR1I2O75469 434 aa8.36□□□□□ -1.07
GARNL3-203ENST00000425970 Q6ZNB5 142 aa8.36□□□□□ -1.07
GARNL3-203ENST00000425970 RDH13Q8NBN7 331 aa8.36□□□□□ -1.07
GARNL3-203ENST00000425970 V9GY48 417 aaPredicted RBP8.36□□□□□ -1.07
GARNL3-203ENST00000425970 FECHP22830 423 aa8.35□□□□□ -1.07
GARNL3-203ENST00000425970 GPR37O15354 613 aa8.34□□□□□ -1.07
GARNL3-203ENST00000425970 SLC10A3P09131 477 aa8.34□□□□□ -1.07
GARNL3-203ENST00000425970 DAXXQ9UER7 740 aaPredicted RBP8.34□□□□□ -1.07
GARNL3-203ENST00000425970 DDX11L8A8MPP1 907 aa8.33□□□□□ -1.08
GARNL3-203ENST00000425970 SULF1Q8IWU6 871 aa8.33□□□□□ -1.08
GARNL3-203ENST00000425970 TLL1O43897 1013 aa8.32□□□□□ -1.08
GARNL3-203ENST00000425970 GFRA3O60609 400 aa8.32□□□□□ -1.08
GARNL3-203ENST00000425970 RNF223E7ERA6 249 aa8.29□□□□□ -1.08
GARNL3-203ENST00000425970 ADH1BP00325 375 aa8.29□□□□□ -1.08
GARNL3-203ENST00000425970 NLRP7Q8WX94 980 aa8.29□□□□□ -1.08
GARNL3-203ENST00000425970 S1PR4O95977 384 aa8.28□□□□□ -1.08
GARNL3-203ENST00000425970 PUS10Q3MIT2 529 aaKnown RBP8.28□□□□□ -1.08
GARNL3-203ENST00000425970 SCUBE3Q8IX30 993 aa8.28□□□□□ -1.08
GARNL3-203ENST00000425970 NRG2O14511 850 aaPredicted RBP8.27□□□□□ -1.09
GARNL3-203ENST00000425970 SLC19A1P41440 591 aa8.27□□□□□ -1.09
GARNL3-203ENST00000425970 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
GARNL3-203ENST00000425970 ANKLE1Q8NAG6 615 aa8.27□□□□□ -1.09
GARNL3-203ENST00000425970 SLC6A16Q9GZN6 736 aa8.27□□□□□ -1.09
GARNL3-203ENST00000425970 PDZRN3Q9UPQ7 1066 aa8.27□□□□□ -1.09
GARNL3-203ENST00000425970 CUX2O14529 1486 aa8.26□□□□□ -1.09
GARNL3-203ENST00000425970 ATP6V1AP38606 617 aa8.26□□□□□ -1.09
GARNL3-203ENST00000425970 SPSB2Q99619 263 aa8.26□□□□□ -1.09
GARNL3-203ENST00000425970 GRIPAP1Q4V328 841 aa8.25□□□□□ -1.09
GARNL3-203ENST00000425970 GCGRP47871 477 aa8.24□□□□□ -1.09
GARNL3-203ENST00000425970 FUT2Q10981 343 aa8.24□□□□□ -1.09
GARNL3-203ENST00000425970 PHOX2BQ99453 314 aa8.24□□□□□ -1.09
GARNL3-203ENST00000425970 PPEF1O14829 653 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-203ENST00000425970 MINK1Q8N4C8 1332 aaPredicted RBP8.23□□□□□ -1.09
GARNL3-203ENST00000425970 IRF6O14896 467 aa8.22□□□□□ -1.09
GARNL3-203ENST00000425970 FMNL1O95466 1100 aaPredicted RBP8.22□□□□□ -1.09
GARNL3-203ENST00000425970 MORN1Q5T089 497 aa8.22□□□□□ -1.09
GARNL3-203ENST00000425970 KRI1Q8N9T8 703 aaKnown RBP8.22□□□□□ -1.09
GARNL3-203ENST00000425970 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
GARNL3-203ENST00000425970 MDM2Q00987 491 aaPredicted RBP8.2□□□□□ -1.1
GARNL3-203ENST00000425970 SPRYD7Q5W111 196 aa8.2□□□□□ -1.1
GARNL3-203ENST00000425970 SLC27A5Q9Y2P5 690 aa8.19□□□□□ -1.1
GARNL3-203ENST00000425970 ERCC6Q03468 1493 aa8.19□□□□□ -1.1
GARNL3-203ENST00000425970 Q3C1V9 767 aa8.18□□□□□ -1.1
GARNL3-203ENST00000425970 ZNF697Q5TEC3 545 aa8.18□□□□□ -1.1
GARNL3-203ENST00000425970 ZNF598Q86UK7 904 aaKnown RBP8.18□□□□□ -1.1
GARNL3-203ENST00000425970 CCDC102AQ96A19 550 aa8.18□□□□□ -1.1
GARNL3-203ENST00000425970 HMGXB3Q12766 1538 aa8.18□□□□□ -1.1
GARNL3-203ENST00000425970 CLCN1P35523 988 aa8.17□□□□□ -1.1
GARNL3-203ENST00000425970 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.17□□□□□ -1.1
GARNL3-203ENST00000425970 SALL2Q9Y467 1007 aaPredicted RBP8.17□□□□□ -1.1
GARNL3-203ENST00000425970 KDM4AO75164 1064 aa8.16□□□□□ -1.1
GARNL3-203ENST00000425970 CD46P15529 392 aa8.16□□□□□ -1.1
GARNL3-203ENST00000425970 PKDCCQ504Y2 493 aa8.16□□□□□ -1.1
GARNL3-203ENST00000425970 LMOD2Q6P5Q4 547 aa8.16□□□□□ -1.1
GARNL3-203ENST00000425970 LIAT1Q6ZQX7 453 aa8.16□□□□□ -1.1
GARNL3-203ENST00000425970 SMARCA2P51531 1590 aa8.15□□□□□ -1.1
GARNL3-203ENST00000425970 USP46P62068 366 aa8.15□□□□□ -1.1
GARNL3-203ENST00000425970 THAP11Q96EK4 314 aa8.15□□□□□ -1.1
GARNL3-203ENST00000425970 GPCPD1Q9NPB8 672 aa8.15□□□□□ -1.1
GARNL3-203ENST00000425970 FCF1Q9Y324 198 aaKnown RBP8.15□□□□□ -1.1
GARNL3-203ENST00000425970 SMARCA4P51532 1647 aa8.14□□□□□ -1.11
GARNL3-203ENST00000425970 CD2BP2O95400 341 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms