RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 DUOX2Q9NRD8 1548 aa19.63■□□□□ 0.73
SGCE-203ENST00000425444 KIF15Q9NS87 1388 aa19.63■□□□□ 0.73
SGCE-203ENST00000425444 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
SGCE-203ENST00000425444 FAM50AQ14320 339 aaKnown RBP19.61■□□□□ 0.73
SGCE-203ENST00000425444 IDI1Q13907 227 aa19.6■□□□□ 0.73
SGCE-203ENST00000425444 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.6■□□□□ 0.73
SGCE-203ENST00000425444 CDK12Q9NYV4 1490 aaPredicted RBP19.6■□□□□ 0.73
SGCE-203ENST00000425444 NUTM2BA6NNL0 878 aaPredicted RBP19.59■□□□□ 0.73
SGCE-203ENST00000425444 NUTM2EB1AL46 878 aaPredicted RBP19.59■□□□□ 0.73
SGCE-203ENST00000425444 NUTM2AQ8IVF1 878 aaPredicted RBP19.59■□□□□ 0.73
SGCE-203ENST00000425444 RRP7BPQ9NSQ0 103 aa19.59■□□□□ 0.73
SGCE-203ENST00000425444 C14orf37Q86TY3 774 aa19.58■□□□□ 0.72
SGCE-203ENST00000425444 CHIC2Q9UKJ5 165 aa19.58■□□□□ 0.72
SGCE-203ENST00000425444 ERBINQ96RT1 1412 aa19.58■□□□□ 0.72
SGCE-203ENST00000425444 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
SGCE-203ENST00000425444 KDM5AP29375 1690 aaKnown RBP19.57■□□□□ 0.72
SGCE-203ENST00000425444 SHPRHQ149N8 1683 aa19.56■□□□□ 0.72
SGCE-203ENST00000425444 AFF2P51816 1311 aa19.55■□□□□ 0.72
SGCE-203ENST00000425444 PPARGC1BQ86YN6 1023 aaKnown RBP19.53■□□□□ 0.72
SGCE-203ENST00000425444 AHDC1Q5TGY3 1603 aaPredicted RBP19.53■□□□□ 0.72
SGCE-203ENST00000425444 NUTM2DQ5VT03 806 aaPredicted RBP19.52■□□□□ 0.72
SGCE-203ENST00000425444 CADPS2Q86UW7 1296 aa19.52■□□□□ 0.72
SGCE-203ENST00000425444 KANK1Q14678 1352 aa19.52■□□□□ 0.72
SGCE-203ENST00000425444 ATF3P18847 181 aa19.51■□□□□ 0.71
SGCE-203ENST00000425444 CHD2O14647 1828 aaKnown RBP19.51■□□□□ 0.71
SGCE-203ENST00000425444 EP400Q96L91 3159 aa19.5■□□□□ 0.71
SGCE-203ENST00000425444 ADGRL2O95490 1459 aa19.5■□□□□ 0.71
SGCE-203ENST00000425444 RGS12O14924 1447 aa19.5■□□□□ 0.71
SGCE-203ENST00000425444 PPP1R15AO75807 674 aaPredicted RBP19.49■□□□□ 0.71
SGCE-203ENST00000425444 QTRT2Q9H974 415 aaKnown RBP19.49■□□□□ 0.71
SGCE-203ENST00000425444 ADGRB3O60242 1522 aa19.49■□□□□ 0.71
SGCE-203ENST00000425444 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
SGCE-203ENST00000425444 RBM6P78332 1123 aaKnown RBP19.48■□□□□ 0.71
SGCE-203ENST00000425444 C19orf44Q9H6X5 657 aa19.48■□□□□ 0.71
SGCE-203ENST00000425444 ZRANB1Q9UGI0 708 aa19.47■□□□□ 0.71
SGCE-203ENST00000425444 PLEKHG1Q9ULL1 1385 aa19.46■□□□□ 0.71
SGCE-203ENST00000425444 FOXD1Q16676 465 aa19.46■□□□□ 0.71
SGCE-203ENST00000425444 BRINP3Q76B58 766 aa19.46■□□□□ 0.71
SGCE-203ENST00000425444 C8orf37Q96NL8 207 aa19.46■□□□□ 0.71
SGCE-203ENST00000425444 SLC52A1Q9NWF4 448 aa19.46■□□□□ 0.71
SGCE-203ENST00000425444 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.45■□□□□ 0.7
SGCE-203ENST00000425444 DIP2AQ14689 1571 aa19.44■□□□□ 0.7
SGCE-203ENST00000425444 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
SGCE-203ENST00000425444 TBX22Q9Y458 520 aa19.43■□□□□ 0.7
SGCE-203ENST00000425444 NOS1P29475 1434 aa19.42■□□□□ 0.7
SGCE-203ENST00000425444 ANKRD50Q9ULJ7 1429 aa19.42■□□□□ 0.7
SGCE-203ENST00000425444 ITGAEP38570 1179 aa19.42■□□□□ 0.7
SGCE-203ENST00000425444 ATAD2Q6PL18 1390 aa19.42■□□□□ 0.7
SGCE-203ENST00000425444 ZFYVE9O95405 1425 aa19.42■□□□□ 0.7
SGCE-203ENST00000425444 RIMS2Q9UQ26 1411 aa19.41■□□□□ 0.7
SGCE-203ENST00000425444 LMTK2Q8IWU2 1503 aa19.41■□□□□ 0.7
SGCE-203ENST00000425444 NGLY1Q96IV0 654 aa19.4■□□□□ 0.7
SGCE-203ENST00000425444 LRRC59Q96AG4 307 aaKnown RBP19.38■□□□□ 0.69
SGCE-203ENST00000425444 SETD5Q9C0A6 1442 aa19.38■□□□□ 0.69
SGCE-203ENST00000425444 MYO5BQ9ULV0 1848 aa19.37■□□□□ 0.69
SGCE-203ENST00000425444 SETBP1Q9Y6X0 1596 aa19.37■□□□□ 0.69
SGCE-203ENST00000425444 ROCK1Q13464 1354 aa19.37■□□□□ 0.69
SGCE-203ENST00000425444 ASXL1Q8IXJ9 1541 aa19.35■□□□□ 0.69
SGCE-203ENST00000425444 ADAMTS2O95450 1211 aa19.34■□□□□ 0.69
SGCE-203ENST00000425444 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.34■□□□□ 0.69
SGCE-203ENST00000425444 CHGAP10645 457 aaKnown RBP19.33■□□□□ 0.68
SGCE-203ENST00000425444 ADAMTS13Q76LX8 1427 aa19.33■□□□□ 0.68
SGCE-203ENST00000425444 PIK3R4Q99570 1358 aa19.32■□□□□ 0.68
SGCE-203ENST00000425444 AMOTL2Q9Y2J4 779 aa19.32■□□□□ 0.68
SGCE-203ENST00000425444 GCC2Q8IWJ2 1684 aa19.32■□□□□ 0.68
SGCE-203ENST00000425444 RRBP1Q9P2E9 1410 aaKnown RBP19.32■□□□□ 0.68
SGCE-203ENST00000425444 PNPLA6Q8IY17 1366 aa19.32■□□□□ 0.68
SGCE-203ENST00000425444 DDX17Q92841 729 aaKnown RBP19.31■□□□□ 0.68
SGCE-203ENST00000425444 UNC13BO14795 1591 aa19.31■□□□□ 0.68
SGCE-203ENST00000425444 NHSL1Q5SYE7 1610 aa19.3■□□□□ 0.68
SGCE-203ENST00000425444 DCCP43146 1447 aa19.3■□□□□ 0.68
SGCE-203ENST00000425444 USP21Q9UK80 565 aa19.29■□□□□ 0.68
SGCE-203ENST00000425444 TMEM131LA2VDJ0 1609 aa19.29■□□□□ 0.68
SGCE-203ENST00000425444 TRPC5Q9UL62 973 aaPredicted RBP19.28■□□□□ 0.68
SGCE-203ENST00000425444 MST1RQ04912 1400 aa19.27■□□□□ 0.68
SGCE-203ENST00000425444 CCDC125Q86Z20 511 aa19.27■□□□□ 0.68
SGCE-203ENST00000425444 RPRD2Q5VT52 1461 aaKnown RBP19.27■□□□□ 0.67
SGCE-203ENST00000425444 PTPRUQ92729 1446 aa19.25■□□□□ 0.67
SGCE-203ENST00000425444 TRPM2O94759 1503 aa19.25■□□□□ 0.67
SGCE-203ENST00000425444 IQGAP3Q86VI3 1631 aa19.23■□□□□ 0.67
SGCE-203ENST00000425444 NUP155O75694 1391 aa19.22■□□□□ 0.67
SGCE-203ENST00000425444 FNBP4Q8N3X1 1017 aaPredicted RBP19.2■□□□□ 0.66
SGCE-203ENST00000425444 ATRNO75882 1429 aa19.19■□□□□ 0.66
SGCE-203ENST00000425444 E9PCH4 1651 aa19.17■□□□□ 0.66
SGCE-203ENST00000425444 NAIPQ13075 1403 aa19.17■□□□□ 0.66
SGCE-203ENST00000425444 XRN1Q8IZH2 1706 aaKnown RBP19.16■□□□□ 0.66
SGCE-203ENST00000425444 PTCH1Q13635 1447 aa19.16■□□□□ 0.66
SGCE-203ENST00000425444 ADGRL3Q9HAR2 1447 aa19.15■□□□□ 0.66
SGCE-203ENST00000425444 HFM1A2PYH4 1435 aa19.12■□□□□ 0.65
SGCE-203ENST00000425444 SOS2Q07890 1332 aaPredicted RBP19.12■□□□□ 0.65
SGCE-203ENST00000425444 C1orf167Q5SNV9 1468 aa19.11■□□□□ 0.65
SGCE-203ENST00000425444 BLMP54132 1417 aaPredicted RBP19.11■□□□□ 0.65
SGCE-203ENST00000425444 DEFB132Q7Z7B7 95 aa19.11■□□□□ 0.65
SGCE-203ENST00000425444 METP08581 1390 aa19.1■□□□□ 0.65
SGCE-203ENST00000425444 GJD4Q96KN9 370 aaPredicted RBP19.1■□□□□ 0.65
SGCE-203ENST00000425444 ORAI2Q96SN7 254 aa19.09■□□□□ 0.65
SGCE-203ENST00000425444 LRP5O75197 1615 aa19.09■□□□□ 0.65
SGCE-203ENST00000425444 BCL9LQ86UU0 1499 aa19.09■□□□□ 0.65
SGCE-203ENST00000425444 NALCNQ8IZF0 1738 aa19.08■□□□□ 0.65
SGCE-203ENST00000425444 NRXN3Q9Y4C0 1643 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms