RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 IPO9Q96P70 1041 aaKnown RBP17.2■□□□□ 0.34
COL12A1-205ENST00000425443 WASHC2CQ9Y4E1 1318 aa17.2■□□□□ 0.34
COL12A1-205ENST00000425443 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
COL12A1-205ENST00000425443 ARAP3Q8WWN8 1544 aa17.2■□□□□ 0.34
COL12A1-205ENST00000425443 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
COL12A1-205ENST00000425443 STAC3Q96MF2 364 aa17.19■□□□□ 0.34
COL12A1-205ENST00000425443 OSCARQ8IYS5 282 aa17.17■□□□□ 0.34
COL12A1-205ENST00000425443 LAMC1P11047 1609 aa17.17■□□□□ 0.34
COL12A1-205ENST00000425443 TRPM2O94759 1503 aa17.15■□□□□ 0.34
COL12A1-205ENST00000425443 ANP32AP39687 249 aaKnown RBP17.15■□□□□ 0.34
COL12A1-205ENST00000425443 PDE4CQ08493 712 aa17.15■□□□□ 0.34
COL12A1-205ENST00000425443 GGT6Q6P531 493 aa17.15■□□□□ 0.34
COL12A1-205ENST00000425443 EIF3AQ14152 1382 aaKnown RBP17.14■□□□□ 0.33
COL12A1-205ENST00000425443 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
COL12A1-205ENST00000425443 CFAP70Q5T0N1 1121 aa17.13■□□□□ 0.33
COL12A1-205ENST00000425443 WDR43Q15061 677 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL12A1-205ENST00000425443 PTPRTO14522 1441 aa17.12■□□□□ 0.33
COL12A1-205ENST00000425443 ABCA9Q8IUA7 1624 aa17.12■□□□□ 0.33
COL12A1-205ENST00000425443 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
COL12A1-205ENST00000425443 SCAF11Q99590 1463 aaKnown RBP17.12■□□□□ 0.33
COL12A1-205ENST00000425443 CLTCL1P53675 1640 aa17.11■□□□□ 0.33
COL12A1-205ENST00000425443 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
COL12A1-205ENST00000425443 TET3O43151 1660 aa17.11■□□□□ 0.33
COL12A1-205ENST00000425443 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
COL12A1-205ENST00000425443 MADDQ8WXG6 1647 aa17.1■□□□□ 0.33
COL12A1-205ENST00000425443 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
COL12A1-205ENST00000425443 C20orf194Q5TEA3 1177 aa17.1■□□□□ 0.33
COL12A1-205ENST00000425443 INO80Q9ULG1 1556 aaPredicted RBP17.1■□□□□ 0.33
COL12A1-205ENST00000425443 PDE4AP27815 886 aa17.1■□□□□ 0.33
COL12A1-205ENST00000425443 CRBNQ96SW2 442 aa17.09■□□□□ 0.33
COL12A1-205ENST00000425443 CEP152O94986 1710 aa17.09■□□□□ 0.33
COL12A1-205ENST00000425443 ADGRF5Q8IZF2 1346 aa17.08■□□□□ 0.33
COL12A1-205ENST00000425443 SENP3Q9H4L4 574 aaPredicted RBP17.07■□□□□ 0.32
COL12A1-205ENST00000425443 ADAMTS8Q9UP79 889 aa17.07■□□□□ 0.32
COL12A1-205ENST00000425443 CD109Q6YHK3 1445 aa17.07■□□□□ 0.32
COL12A1-205ENST00000425443 DEPDC5O75140 1603 aa17.07■□□□□ 0.32
COL12A1-205ENST00000425443 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
COL12A1-205ENST00000425443 PPP2R1AP30153 589 aa17.07■□□□□ 0.32
COL12A1-205ENST00000425443 ZNF518AQ6AHZ1 1483 aa17.07■□□□□ 0.32
COL12A1-205ENST00000425443 BACH2Q9BYV9 841 aa17.06■□□□□ 0.32
COL12A1-205ENST00000425443 UGGT1Q9NYU2 1555 aa17.06■□□□□ 0.32
COL12A1-205ENST00000425443 PDIA4P13667 645 aaKnown RBP17.06■□□□□ 0.32
COL12A1-205ENST00000425443 TCERG1O14776 1098 aaKnown RBP17.05■□□□□ 0.32
COL12A1-205ENST00000425443 ZMYND15Q9H091 742 aa17.05■□□□□ 0.32
COL12A1-205ENST00000425443 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
COL12A1-205ENST00000425443 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
COL12A1-205ENST00000425443 ZMYM4Q5VZL5 1548 aa17.04■□□□□ 0.32
COL12A1-205ENST00000425443 AMER1Q5JTC6 1135 aaPredicted RBP17.03■□□□□ 0.32
COL12A1-205ENST00000425443 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.32
COL12A1-205ENST00000425443 IQGAP1P46940 1657 aa17.02■□□□□ 0.32
COL12A1-205ENST00000425443 VSIG10Q8N0Z9 540 aa17.02■□□□□ 0.32
COL12A1-205ENST00000425443 BCL11BQ9C0K0 894 aaPredicted RBP17.02■□□□□ 0.32
COL12A1-205ENST00000425443 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.31
COL12A1-205ENST00000425443 LAS1LQ9Y4W2 734 aaKnown RBP17.01■□□□□ 0.31
COL12A1-205ENST00000425443 VWDEQ8N2E2 1590 aa17.01■□□□□ 0.31
COL12A1-205ENST00000425443 RAPGEF3O95398 923 aa17.01■□□□□ 0.31
COL12A1-205ENST00000425443 KIF1BO60333 1816 aa17■□□□□ 0.31
COL12A1-205ENST00000425443 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
COL12A1-205ENST00000425443 EFCAB6Q5THR3 1501 aa16.99■□□□□ 0.31
COL12A1-205ENST00000425443 NOS1P29475 1434 aa16.99■□□□□ 0.31
COL12A1-205ENST00000425443 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
COL12A1-205ENST00000425443 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
COL12A1-205ENST00000425443 ASXL1Q8IXJ9 1541 aa16.98■□□□□ 0.31
COL12A1-205ENST00000425443 CENPJQ9HC77 1338 aaPredicted RBP16.98■□□□□ 0.31
COL12A1-205ENST00000425443 MROH1Q8NDA8 1641 aa16.97■□□□□ 0.31
COL12A1-205ENST00000425443 DUSP27Q5VZP5 1158 aa16.97■□□□□ 0.31
COL12A1-205ENST00000425443 SYNMO15061 1565 aa16.97■□□□□ 0.31
COL12A1-205ENST00000425443 TMEM132EQ6IEE7 984 aa16.96■□□□□ 0.31
COL12A1-205ENST00000425443 INSRP06213 1382 aa16.96■□□□□ 0.31
COL12A1-205ENST00000425443 POGZQ7Z3K3 1410 aa16.96■□□□□ 0.31
COL12A1-205ENST00000425443 MAP3K4Q9Y6R4 1608 aa16.96■□□□□ 0.31
COL12A1-205ENST00000425443 MS4A1P11836 297 aa16.96■□□□□ 0.31
COL12A1-205ENST00000425443 MYOM2P54296 1465 aa16.95■□□□□ 0.3
COL12A1-205ENST00000425443 PPRC1Q5VV67 1664 aaKnown RBP16.95■□□□□ 0.3
COL12A1-205ENST00000425443 KDM2BQ8NHM5 1336 aa16.95■□□□□ 0.3
COL12A1-205ENST00000425443 RTL5Q5HYW3 569 aaPredicted RBP16.95■□□□□ 0.3
COL12A1-205ENST00000425443 ZNF521Q96K83 1311 aa16.94■□□□□ 0.3
COL12A1-205ENST00000425443 SPINK5Q9NQ38 1064 aaPredicted RBP16.94■□□□□ 0.3
COL12A1-205ENST00000425443 KDM5AP29375 1690 aaKnown RBP16.94■□□□□ 0.3
COL12A1-205ENST00000425443 MYOM1P52179 1685 aa16.94■□□□□ 0.3
COL12A1-205ENST00000425443 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
COL12A1-205ENST00000425443 ABCA6Q8N139 1617 aa16.93■□□□□ 0.3
COL12A1-205ENST00000425443 NPATQ14207 1427 aa16.93■□□□□ 0.3
COL12A1-205ENST00000425443 NEUROD2Q15784 382 aa16.92■□□□□ 0.3
COL12A1-205ENST00000425443 CFAP74Q9C0B2 1584 aa16.92■□□□□ 0.3
COL12A1-205ENST00000425443 KIAA1210Q9ULL0 1709 aa16.92■□□□□ 0.3
COL12A1-205ENST00000425443 APAF1O14727 1248 aa16.91■□□□□ 0.3
COL12A1-205ENST00000425443 FGD1P98174 961 aa16.91■□□□□ 0.3
COL12A1-205ENST00000425443 CARD14Q9BXL6 1004 aa16.91■□□□□ 0.3
COL12A1-205ENST00000425443 ERVK-7P63135 1459 aa16.91■□□□□ 0.3
COL12A1-205ENST00000425443 MLH3Q9UHC1 1453 aa16.91■□□□□ 0.3
COL12A1-205ENST00000425443 SLC4A3P48751 1232 aa16.91■□□□□ 0.3
COL12A1-205ENST00000425443 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
COL12A1-205ENST00000425443 NEFMP07197 916 aa16.9■□□□□ 0.3
COL12A1-205ENST00000425443 C14orf93Q9H972 538 aaKnown RBP16.9■□□□□ 0.3
COL12A1-205ENST00000425443 LMTK2Q8IWU2 1503 aa16.9■□□□□ 0.3
COL12A1-205ENST00000425443 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
COL12A1-205ENST00000425443 NEURL4Q96JN8 1562 aa16.89■□□□□ 0.3
COL12A1-205ENST00000425443 HECW2Q9P2P5 1572 aa16.89■□□□□ 0.3
COL12A1-205ENST00000425443 NPC1L1Q9UHC9 1359 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms