RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 VWDEQ8N2E2 1590 aa15.46■□□□□ 0.06
UBR4-207ENST00000425413 ADAMTS8Q9UP79 889 aa15.45■□□□□ 0.06
UBR4-207ENST00000425413 LAMC1P11047 1609 aa15.45■□□□□ 0.06
UBR4-207ENST00000425413 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
UBR4-207ENST00000425413 ERICH6BQ5W0A0 696 aa15.45■□□□□ 0.06
UBR4-207ENST00000425413 RNF17Q9BXT8 1623 aaKnown RBP15.44■□□□□ 0.06
UBR4-207ENST00000425413 CEP152O94986 1710 aa15.44■□□□□ 0.06
UBR4-207ENST00000425413 AMER1Q5JTC6 1135 aaPredicted RBP15.44■□□□□ 0.06
UBR4-207ENST00000425413 NPATQ14207 1427 aa15.44■□□□□ 0.06
UBR4-207ENST00000425413 STAC3Q96MF2 364 aa15.44■□□□□ 0.06
UBR4-207ENST00000425413 EIF3AQ14152 1382 aaKnown RBP15.44■□□□□ 0.06
UBR4-207ENST00000425413 CCDC136Q96JN2 1154 aa15.43■□□□□ 0.06
UBR4-207ENST00000425413 ANP32EQ9BTT0 268 aa15.43■□□□□ 0.06
UBR4-207ENST00000425413 EFCAB6Q5THR3 1501 aa15.43■□□□□ 0.06
UBR4-207ENST00000425413 PPRC1Q5VV67 1664 aaKnown RBP15.43■□□□□ 0.06
UBR4-207ENST00000425413 SAFB2Q14151 953 aaKnown RBP eCLIP15.42■□□□□ 0.06
UBR4-207ENST00000425413 WDR43Q15061 677 aaKnown RBP eCLIP15.42■□□□□ 0.062e-6■■□□□ 13.8
UBR4-207ENST00000425413 TNNT2P45379 298 aaPredicted RBP15.42■□□□□ 0.06
UBR4-207ENST00000425413 RCAN3Q9UKA8 241 aa15.41■□□□□ 0.06
UBR4-207ENST00000425413 CCDC146Q8IYE0 955 aa15.4■□□□□ 0.06
UBR4-207ENST00000425413 PLIN1O60240 522 aa15.4■□□□□ 0.06
UBR4-207ENST00000425413 FRMPD1Q5SYB0 1578 aa15.39■□□□□ 0.05
UBR4-207ENST00000425413 IQGAP1P46940 1657 aa15.39■□□□□ 0.05
UBR4-207ENST00000425413 CARD14Q9BXL6 1004 aa15.39■□□□□ 0.05
UBR4-207ENST00000425413 CENPJQ9HC77 1338 aaPredicted RBP15.38■□□□□ 0.05
UBR4-207ENST00000425413 MLH3Q9UHC1 1453 aa15.38■□□□□ 0.05
UBR4-207ENST00000425413 FAM69CQ0P6D2 419 aa15.38■□□□□ 0.05
UBR4-207ENST00000425413 EXOC6Q8TAG9 804 aa15.38■□□□□ 0.05
UBR4-207ENST00000425413 RNF123Q5XPI4 1314 aa15.37■□□□□ 0.05
UBR4-207ENST00000425413 ABCA6Q8N139 1617 aa15.37■□□□□ 0.05
UBR4-207ENST00000425413 RRP1P56182 461 aaKnown RBP15.37■□□□□ 0.05
UBR4-207ENST00000425413 STK26Q9P289 416 aa15.37■□□□□ 0.05
UBR4-207ENST00000425413 YEATS2Q9ULM3 1422 aa15.37■□□□□ 0.05
UBR4-207ENST00000425413 MROH2AA6NES4 1674 aa15.37■□□□□ 0.05
UBR4-207ENST00000425413 SLC12A5Q9H2X9 1139 aa15.36■□□□□ 0.05
UBR4-207ENST00000425413 MAP3K4Q9Y6R4 1608 aa15.36■□□□□ 0.05
UBR4-207ENST00000425413 HECW2Q9P2P5 1572 aa15.36■□□□□ 0.05
UBR4-207ENST00000425413 IDI1Q13907 227 aa15.36■□□□□ 0.05
UBR4-207ENST00000425413 ERVK-7P63135 1459 aa15.35■□□□□ 0.05
UBR4-207ENST00000425413 KIF1BO60333 1816 aa15.35■□□□□ 0.05
UBR4-207ENST00000425413 C14orf93Q9H972 538 aaKnown RBP15.34■□□□□ 0.05
UBR4-207ENST00000425413 MYOM2P54296 1465 aa15.34■□□□□ 0.05
UBR4-207ENST00000425413 FBXO31Q5XUX0 539 aaPredicted RBP15.34■□□□□ 0.05
UBR4-207ENST00000425413 MLECQ14165 292 aa15.33■□□□□ 0.05
UBR4-207ENST00000425413 PDE3BQ13370 1112 aa15.33■□□□□ 0.04
UBR4-207ENST00000425413 ABCC3O15438 1527 aa15.33■□□□□ 0.04
UBR4-207ENST00000425413 ASXL1Q8IXJ9 1541 aa15.33■□□□□ 0.04
UBR4-207ENST00000425413 LMTK2Q8IWU2 1503 aa15.32■□□□□ 0.04
UBR4-207ENST00000425413 CFAP74Q9C0B2 1584 aa15.31■□□□□ 0.04
UBR4-207ENST00000425413 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
UBR4-207ENST00000425413 NEO1Q92859 1461 aa15.31■□□□□ 0.04
UBR4-207ENST00000425413 ADGRB3O60242 1522 aa15.31■□□□□ 0.04
UBR4-207ENST00000425413 PLEKHH1Q9ULM0 1364 aa15.3■□□□□ 0.04
UBR4-207ENST00000425413 APAF1O14727 1248 aa15.3■□□□□ 0.04
UBR4-207ENST00000425413 SYNMO15061 1565 aa15.3■□□□□ 0.04
UBR4-207ENST00000425413 VGFO15240 615 aaPredicted RBP15.3■□□□□ 0.04
UBR4-207ENST00000425413 CABP2Q9NPB3 220 aa15.29■□□□□ 0.04
UBR4-207ENST00000425413 PIK3C2GO75747 1445 aa15.29■□□□□ 0.04
UBR4-207ENST00000425413 MORC1Q86VD1 984 aa15.29■□□□□ 0.04
UBR4-207ENST00000425413 STAG3Q9UJ98 1225 aa15.28■□□□□ 0.04
UBR4-207ENST00000425413 MSH5O43196 834 aa15.27■□□□□ 0.04
UBR4-207ENST00000425413 NEUROD2Q15784 382 aa15.27■□□□□ 0.04
UBR4-207ENST00000425413 DIP2CQ9Y2E4 1556 aa15.27■□□□□ 0.04
UBR4-207ENST00000425413 KDM5AP29375 1690 aaKnown RBP15.27■□□□□ 0.04
UBR4-207ENST00000425413 NSD3Q9BZ95 1437 aa15.27■□□□□ 0.03
UBR4-207ENST00000425413 MYOM1P52179 1685 aa15.27■□□□□ 0.03
UBR4-207ENST00000425413 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.03
UBR4-207ENST00000425413 SLC24A1O60721 1099 aa15.26■□□□□ 0.03
UBR4-207ENST00000425413 C20orf194Q5TEA3 1177 aa15.26■□□□□ 0.03
UBR4-207ENST00000425413 RPGRIP1LQ68CZ1 1315 aa15.26■□□□□ 0.03
UBR4-207ENST00000425413 CRBNQ96SW2 442 aa15.25■□□□□ 0.03
UBR4-207ENST00000425413 KIAA1210Q9ULL0 1709 aa15.25■□□□□ 0.03
UBR4-207ENST00000425413 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
UBR4-207ENST00000425413 SKAP1Q86WV1 359 aa15.24■□□□□ 0.03
UBR4-207ENST00000425413 SPINK5Q9NQ38 1064 aaPredicted RBP15.24■□□□□ 0.03
UBR4-207ENST00000425413 MINK1Q8N4C8 1332 aaPredicted RBP15.24■□□□□ 0.03
UBR4-207ENST00000425413 SRPK2P78362 688 aaKnown RBP15.24■□□□□ 0.03
UBR4-207ENST00000425413 ERICH6Q7L0X2 663 aa15.24■□□□□ 0.03
UBR4-207ENST00000425413 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
UBR4-207ENST00000425413 SIGLEC1Q9BZZ2 1709 aa15.24■□□□□ 0.03
UBR4-207ENST00000425413 IFT172Q9UG01 1749 aa15.23■□□□□ 0.03
UBR4-207ENST00000425413 CAMSAP1Q5T5Y3 1602 aa15.23■□□□□ 0.03
UBR4-207ENST00000425413 DUSP27Q5VZP5 1158 aa15.23■□□□□ 0.03
UBR4-207ENST00000425413 NEURL4Q96JN8 1562 aa15.23■□□□□ 0.03
UBR4-207ENST00000425413 DMRT2Q9Y5R5 561 aa15.23■□□□□ 0.03
UBR4-207ENST00000425413 ZMYM4Q5VZL5 1548 aa15.22■□□□□ 0.03
UBR4-207ENST00000425413 SLC52A1Q9NWF4 448 aa15.22■□□□□ 0.03
UBR4-207ENST00000425413 EVC2Q86UK5 1308 aa15.21■□□□□ 0.03
UBR4-207ENST00000425413 ADGRB1O14514 1584 aa15.21■□□□□ 0.03
UBR4-207ENST00000425413 NPC1L1Q9UHC9 1359 aa15.21■□□□□ 0.03
UBR4-207ENST00000425413 POGKQ9P215 609 aa15.21■□□□□ 0.03
UBR4-207ENST00000425413 TSPOAP1O95153 1857 aa15.2■□□□□ 0.02
UBR4-207ENST00000425413 MTHFSP49914 203 aa15.2■□□□□ 0.02
UBR4-207ENST00000425413 PRAM1Q96QH2 718 aa15.2■□□□□ 0.02
UBR4-207ENST00000425413 SBNO2Q9Y2G9 1366 aa15.2■□□□□ 0.02
UBR4-207ENST00000425413 PPLO60437 1756 aa15.2■□□□□ 0.02
UBR4-207ENST00000425413 RICTORQ6R327 1708 aa15.19■□□□□ 0.02
UBR4-207ENST00000425413 SLFN5Q08AF3 891 aa15.18■□□□□ 0.02
UBR4-207ENST00000425413 CGNL1Q0VF96 1302 aa15.18■□□□□ 0.02
UBR4-207ENST00000425413 ZNF521Q96K83 1311 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms