RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 SYNMO15061 1565 aa14.63□□□□□ -0.07
MDC1-205ENST00000425072 C3P01024 1663 aa14.61□□□□□ -0.07
MDC1-205ENST00000425072 UGGT1Q9NYU2 1555 aa14.61□□□□□ -0.07
MDC1-205ENST00000425072 NLRP1Q9C000 1473 aa14.61□□□□□ -0.07
MDC1-205ENST00000425072 MADDQ8WXG6 1647 aa14.59□□□□□ -0.07
MDC1-205ENST00000425072 RIMS1Q86UR5 1692 aaKnown RBP14.59□□□□□ -0.07
MDC1-205ENST00000425072 ZNF316A6NFI3 1004 aaPredicted RBP14.59□□□□□ -0.07
MDC1-205ENST00000425072 KCNA4P22459 653 aa14.59□□□□□ -0.07
MDC1-205ENST00000425072 EIF4G2P78344 907 aaKnown RBP eCLIP14.58□□□□□ -0.08
MDC1-205ENST00000425072 ZFYVE9O95405 1425 aa14.58□□□□□ -0.08
MDC1-205ENST00000425072 ADGRB3O60242 1522 aa14.57□□□□□ -0.08
MDC1-205ENST00000425072 TMEM131LA2VDJ0 1609 aa14.57□□□□□ -0.08
MDC1-205ENST00000425072 EID1Q9Y6B2 187 aa14.57□□□□□ -0.08
MDC1-205ENST00000425072 PRAG1Q86YV5 1406 aa14.57□□□□□ -0.08
MDC1-205ENST00000425072 PTPRMP28827 1452 aa14.57□□□□□ -0.08
MDC1-205ENST00000425072 CARD11Q9BXL7 1154 aa14.56□□□□□ -0.08
MDC1-205ENST00000425072 KDM5AP29375 1690 aaKnown RBP14.55□□□□□ -0.08
MDC1-205ENST00000425072 C14orf93Q9H972 538 aaKnown RBP14.55□□□□□ -0.08
MDC1-205ENST00000425072 ADGRF5Q8IZF2 1346 aa14.55□□□□□ -0.08
MDC1-205ENST00000425072 A2ML1A8K2U0 1454 aa14.55□□□□□ -0.08
MDC1-205ENST00000425072 MYOM2P54296 1465 aa14.55□□□□□ -0.08
MDC1-205ENST00000425072 ROCK2O75116 1388 aaKnown RBP14.53□□□□□ -0.08
MDC1-205ENST00000425072 SLC24A1O60721 1099 aa14.53□□□□□ -0.08
MDC1-205ENST00000425072 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
MDC1-205ENST00000425072 TXNDC2Q86VQ3 553 aa14.53□□□□□ -0.08
MDC1-205ENST00000425072 PPLO60437 1756 aa14.52□□□□□ -0.08
MDC1-205ENST00000425072 RIMS2Q9UQ26 1411 aa14.52□□□□□ -0.08
MDC1-205ENST00000425072 TMEM2Q9UHN6 1383 aa14.52□□□□□ -0.08
MDC1-205ENST00000425072 NBPF1Q3BBV0 1214 aa14.52□□□□□ -0.09
MDC1-205ENST00000425072 CFAP70Q5T0N1 1121 aa14.52□□□□□ -0.09
MDC1-205ENST00000425072 MYO5BQ9ULV0 1848 aa14.52□□□□□ -0.09
MDC1-205ENST00000425072 NUTM2DQ5VT03 806 aaPredicted RBP14.51□□□□□ -0.09
MDC1-205ENST00000425072 BCANQ96GW7 911 aa14.51□□□□□ -0.09
MDC1-205ENST00000425072 RALGAPBQ86X10 1494 aa14.5□□□□□ -0.09
MDC1-205ENST00000425072 IFT172Q9UG01 1749 aa14.5□□□□□ -0.09
MDC1-205ENST00000425072 ANKLE2Q86XL3 938 aa14.5□□□□□ -0.09
MDC1-205ENST00000425072 NRXN1Q9ULB1 1477 aa14.5□□□□□ -0.09
MDC1-205ENST00000425072 HSPA5P11021 654 aaKnown RBP14.49□□□□□ -0.09
MDC1-205ENST00000425072 NEXMIFQ5QGS0 1516 aa14.49□□□□□ -0.09
MDC1-205ENST00000425072 UBR1Q8IWV7 1749 aa14.49□□□□□ -0.09
MDC1-205ENST00000425072 KIAA1210Q9ULL0 1709 aa14.49□□□□□ -0.09
MDC1-205ENST00000425072 GPRASP1Q5JY77 1395 aa14.48□□□□□ -0.09
MDC1-205ENST00000425072 TRPM1Q7Z4N2 1603 aa14.47□□□□□ -0.09
MDC1-205ENST00000425072 LTKP29376 864 aa14.46□□□□□ -0.09
MDC1-205ENST00000425072 PIK3C2GO75747 1445 aa14.46□□□□□ -0.09
MDC1-205ENST00000425072 MSH5O43196 834 aa14.45□□□□□ -0.1
MDC1-205ENST00000425072 HSPA2P54652 639 aa14.45□□□□□ -0.1
MDC1-205ENST00000425072 HIRIP3Q9BW71 556 aaPredicted RBP14.44□□□□□ -0.1
MDC1-205ENST00000425072 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
MDC1-205ENST00000425072 SLIT1O75093 1534 aa14.44□□□□□ -0.1
MDC1-205ENST00000425072 USP47Q96K76 1375 aa14.44□□□□□ -0.1
MDC1-205ENST00000425072 MYO3AQ8NEV4 1616 aa14.44□□□□□ -0.1
MDC1-205ENST00000425072 ARHGAP23Q9P227 1491 aa14.44□□□□□ -0.1
MDC1-205ENST00000425072 CEP170BQ9Y4F5 1589 aaPredicted RBP14.43□□□□□ -0.1
MDC1-205ENST00000425072 ST20-MTHFSA0A0A6YYL1 179 aa14.43□□□□□ -0.1
MDC1-205ENST00000425072 TMEM132EQ6IEE7 984 aa14.43□□□□□ -0.1
MDC1-205ENST00000425072 EIF3AQ14152 1382 aaKnown RBP14.43□□□□□ -0.1
MDC1-205ENST00000425072 LAMC1P11047 1609 aa14.42□□□□□ -0.1
MDC1-205ENST00000425072 PLEKHG1Q9ULL1 1385 aa14.42□□□□□ -0.1
MDC1-205ENST00000425072 SETBP1Q9Y6X0 1596 aa14.42□□□□□ -0.1
MDC1-205ENST00000425072 SCAF11Q99590 1463 aaKnown RBP14.41□□□□□ -0.1
MDC1-205ENST00000425072 SIRT1Q96EB6 747 aa14.4□□□□□ -0.1
MDC1-205ENST00000425072 TRAK1Q9UPV9 953 aa14.4□□□□□ -0.1
MDC1-205ENST00000425072 ZNF142P52746 1687 aaPredicted RBP14.39□□□□□ -0.11
MDC1-205ENST00000425072 TMF1P82094 1093 aa14.39□□□□□ -0.11
MDC1-205ENST00000425072 CDCA8Q53HL2 280 aa14.39□□□□□ -0.11
MDC1-205ENST00000425072 ALKQ9UM73 1620 aa14.39□□□□□ -0.11
MDC1-205ENST00000425072 STK26Q9P289 416 aa14.37□□□□□ -0.11
MDC1-205ENST00000425072 SLC26A8Q96RN1 970 aa14.36□□□□□ -0.11
MDC1-205ENST00000425072 POGKQ9P215 609 aa14.36□□□□□ -0.11
MDC1-205ENST00000425072 CENPJQ9HC77 1338 aaPredicted RBP14.36□□□□□ -0.11
MDC1-205ENST00000425072 ABCC11Q96J66 1382 aa14.35□□□□□ -0.11
MDC1-205ENST00000425072 LRPPRCP42704 1394 aaKnown RBP14.34□□□□□ -0.11
MDC1-205ENST00000425072 YTHDC2Q9H6S0 1430 aaKnown RBP14.34□□□□□ -0.11
MDC1-205ENST00000425072 TESK2Q96S53 571 aa14.34□□□□□ -0.11
MDC1-205ENST00000425072 PIK3R4Q99570 1358 aa14.34□□□□□ -0.11
MDC1-205ENST00000425072 DIEXFQ68CQ4 756 aaKnown RBP14.33□□□□□ -0.12
MDC1-205ENST00000425072 ADGRB1O14514 1584 aa14.33□□□□□ -0.12
MDC1-205ENST00000425072 NCKAP5LQ9HCH0 1330 aa14.33□□□□□ -0.12
MDC1-205ENST00000425072 ADAMTS13Q76LX8 1427 aa14.32□□□□□ -0.12
MDC1-205ENST00000425072 PUS7Q96PZ0 661 aaKnown RBP14.32□□□□□ -0.12
MDC1-205ENST00000425072 AMOTL2Q9Y2J4 779 aa14.32□□□□□ -0.12
MDC1-205ENST00000425072 IQGAP1P46940 1657 aa14.32□□□□□ -0.12
MDC1-205ENST00000425072 METP08581 1390 aa14.32□□□□□ -0.12
MDC1-205ENST00000425072 MED14O60244 1454 aa14.31□□□□□ -0.12
MDC1-205ENST00000425072 C11orf95C9JLR9 678 aaPredicted RBP14.31□□□□□ -0.12
MDC1-205ENST00000425072 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
MDC1-205ENST00000425072 DMRT2Q9Y5R5 561 aa14.31□□□□□ -0.12
MDC1-205ENST00000425072 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
MDC1-205ENST00000425072 WASHC2AQ641Q2 1341 aa14.3□□□□□ -0.12
MDC1-205ENST00000425072 SBNO2Q9Y2G9 1366 aa14.3□□□□□ -0.12
MDC1-205ENST00000425072 NPHP4O75161 1426 aaPredicted RBP14.3□□□□□ -0.12
MDC1-205ENST00000425072 DIP2AQ14689 1571 aa14.3□□□□□ -0.12
MDC1-205ENST00000425072 POLR3GLQ9BT43 218 aa14.29□□□□□ -0.12
MDC1-205ENST00000425072 KIF7Q2M1P5 1343 aa14.29□□□□□ -0.12
MDC1-205ENST00000425072 EVC2Q86UK5 1308 aa14.29□□□□□ -0.12
MDC1-205ENST00000425072 CCDC7Q96M83 1385 aa14.29□□□□□ -0.12
MDC1-205ENST00000425072 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
MDC1-205ENST00000425072 DLC1Q96QB1 1528 aa14.27□□□□□ -0.12
MDC1-205ENST00000425072 FAM135BQ49AJ0 1406 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms