RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 WNT2BQ93097 391 aa8.75□□□□□ -1.01
HDAC9-209ENST00000425071 PHOX2BQ99453 314 aa8.75□□□□□ -1.01
HDAC9-209ENST00000425071 GPCPD1Q9NPB8 672 aa8.75□□□□□ -1.01
HDAC9-209ENST00000425071 PDE4DQ08499 809 aa8.74□□□□□ -1.01
HDAC9-209ENST00000425071 SULF1Q8IWU6 871 aa8.74□□□□□ -1.01
HDAC9-209ENST00000425071 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
HDAC9-209ENST00000425071 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-209ENST00000425071 SOWAHBA6NEL2 793 aa8.73□□□□□ -1.01
HDAC9-209ENST00000425071 SAMD7Q7Z3H4 446 aa8.73□□□□□ -1.01
HDAC9-209ENST00000425071 TMUB1Q9BVT8 246 aa8.73□□□□□ -1.01
HDAC9-209ENST00000425071 MDM2Q00987 491 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-209ENST00000425071 TTLL12Q14166 644 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-209ENST00000425071 SWT1Q5T5J6 900 aaKnown RBP8.72□□□□□ -1.01
HDAC9-209ENST00000425071 RNF166Q96A37 237 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-209ENST00000425071 THSD4Q6ZMP0 1018 aa8.69□□□□□ -1.02
HDAC9-209ENST00000425071 NYAP1Q6ZVC0 841 aa8.69□□□□□ -1.02
HDAC9-209ENST00000425071 PARP9Q8IXQ6 854 aa8.69□□□□□ -1.02
HDAC9-209ENST00000425071 TSR3Q9UJK0 312 aaKnown RBP8.69□□□□□ -1.02
HDAC9-209ENST00000425071 KCTD12Q96CX2 325 aaKnown RBP8.68□□□□□ -1.02
HDAC9-209ENST00000425071 PRR14Q9BWN1 585 aa8.68□□□□□ -1.02
HDAC9-209ENST00000425071 FAM217BQ9NTX9 383 aaPredicted RBP8.68□□□□□ -1.02
HDAC9-209ENST00000425071 PPP4CP60510 307 aa8.67□□□□□ -1.02
HDAC9-209ENST00000425071 GIGYF2Q6Y7W6 1299 aaKnown RBP8.67□□□□□ -1.02
HDAC9-209ENST00000425071 SSTR3P32745 418 aaPredicted RBP8.66□□□□□ -1.02
HDAC9-209ENST00000425071 DDX11L8A8MPP1 907 aa8.65□□□□□ -1.02
HDAC9-209ENST00000425071 BCAMP50895 628 aa8.65□□□□□ -1.02
HDAC9-209ENST00000425071 NLRP7Q8WX94 980 aa8.65□□□□□ -1.02
HDAC9-209ENST00000425071 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
HDAC9-209ENST00000425071 HPS5Q9UPZ3 1129 aa8.65□□□□□ -1.02
HDAC9-209ENST00000425071 RNF40O75150 1001 aa8.64□□□□□ -1.03
HDAC9-209ENST00000425071 CD46P15529 392 aa8.64□□□□□ -1.03
HDAC9-209ENST00000425071 DIXDC1Q155Q3 683 aa8.64□□□□□ -1.03
HDAC9-209ENST00000425071 NEUROD2Q15784 382 aa8.64□□□□□ -1.03
HDAC9-209ENST00000425071 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
HDAC9-209ENST00000425071 HCSTQ9UBK5 93 aa8.64□□□□□ -1.03
HDAC9-209ENST00000425071 BRPF1P55201 1214 aaPredicted RBP8.63□□□□□ -1.03
HDAC9-209ENST00000425071 KMT5BQ4FZB7 885 aa8.63□□□□□ -1.03
HDAC9-209ENST00000425071 RDH13Q8NBN7 331 aa8.63□□□□□ -1.03
HDAC9-209ENST00000425071 SLC10A3P09131 477 aa8.62□□□□□ -1.03
HDAC9-209ENST00000425071 DDRGK1Q96HY6 314 aa8.62□□□□□ -1.03
HDAC9-209ENST00000425071 GCGRP47871 477 aa8.6□□□□□ -1.03
HDAC9-209ENST00000425071 USP46P62068 366 aa8.6□□□□□ -1.03
HDAC9-209ENST00000425071 GPBP1L1Q9HC44 474 aaPredicted RBP8.6□□□□□ -1.03
HDAC9-209ENST00000425071 WBP1LQ9NX94 342 aa8.6□□□□□ -1.03
HDAC9-209ENST00000425071 CFHP08603 1231 aa8.59□□□□□ -1.03
HDAC9-209ENST00000425071 MS4A1P11836 297 aa8.59□□□□□ -1.03
HDAC9-209ENST00000425071 PTPN5P54829 565 aa8.59□□□□□ -1.03
HDAC9-209ENST00000425071 GRIPAP1Q4V328 841 aa8.59□□□□□ -1.03
HDAC9-209ENST00000425071 BEGAINQ9BUH8 593 aa8.59□□□□□ -1.03
HDAC9-209ENST00000425071 ACTN4O43707 911 aaKnown RBP8.58□□□□□ -1.04
HDAC9-209ENST00000425071 NUTM1Q86Y26 1132 aa8.57□□□□□ -1.04
HDAC9-209ENST00000425071 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
HDAC9-209ENST00000425071 KDM4AO75164 1064 aa8.56□□□□□ -1.04
HDAC9-209ENST00000425071 ATP6V1AP38606 617 aa8.55□□□□□ -1.04
HDAC9-209ENST00000425071 APLP1P51693 650 aa8.55□□□□□ -1.04
HDAC9-209ENST00000425071 GJA5P36382 358 aa8.54□□□□□ -1.04
HDAC9-209ENST00000425071 FAM117AQ9C073 453 aa8.53□□□□□ -1.04
HDAC9-209ENST00000425071 GOPCQ9HD26 462 aa8.53□□□□□ -1.04
HDAC9-209ENST00000425071 PCDHB3Q9Y5E6 796 aa8.53□□□□□ -1.04
HDAC9-209ENST00000425071 SPIRE2Q8WWL2 714 aa8.52□□□□□ -1.05
HDAC9-209ENST00000425071 NR1I2O75469 434 aa8.51□□□□□ -1.05
HDAC9-209ENST00000425071 FUT2Q10981 343 aa8.51□□□□□ -1.05
HDAC9-209ENST00000425071 TBC1D2Q9BYX2 928 aa8.51□□□□□ -1.05
HDAC9-209ENST00000425071 HOXA2O43364 376 aa8.5□□□□□ -1.05
HDAC9-209ENST00000425071 TUSC1Q2TAM9 212 aa8.49□□□□□ -1.05
HDAC9-209ENST00000425071 SH3D19Q5HYK7 790 aa8.49□□□□□ -1.05
HDAC9-209ENST00000425071 MORN1Q5T089 497 aa8.49□□□□□ -1.05
HDAC9-209ENST00000425071 SALL2Q9Y467 1007 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-209ENST00000425071 PLEKHG3A1L390 1219 aa8.48□□□□□ -1.05
HDAC9-209ENST00000425071 ITGBL1O95965 494 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-209ENST00000425071 SKIV2LQ15477 1246 aaKnown RBP8.48□□□□□ -1.05
HDAC9-209ENST00000425071 Q3C1V9 767 aa8.48□□□□□ -1.05
HDAC9-209ENST00000425071 IL27Q8NEV9 243 aa8.48□□□□□ -1.05
HDAC9-209ENST00000425071 IL21Q9HBE4 155 aa8.48□□□□□ -1.05
HDAC9-209ENST00000425071 SPTLC1O15269 473 aa8.47□□□□□ -1.05
HDAC9-209ENST00000425071 MYSM1Q5VVJ2 828 aa8.47□□□□□ -1.05
HDAC9-209ENST00000425071 TMEM132AQ24JP5 1023 aa8.46□□□□□ -1.06
HDAC9-209ENST00000425071 TJAP1Q5JTD0 557 aa8.46□□□□□ -1.06
HDAC9-209ENST00000425071 RIC3Q7Z5B4 369 aa8.46□□□□□ -1.06
HDAC9-209ENST00000425071 SCUBE3Q8IX30 993 aa8.46□□□□□ -1.06
HDAC9-209ENST00000425071 MTRQ99707 1265 aa8.46□□□□□ -1.06
HDAC9-209ENST00000425071 MOXD2PA6NHM9 499 aa8.45□□□□□ -1.06
HDAC9-209ENST00000425071 ZPR1O75312 459 aa8.45□□□□□ -1.06
HDAC9-209ENST00000425071 FDX1P10109 184 aa8.45□□□□□ -1.06
HDAC9-209ENST00000425071 KCNC4Q03721 635 aa8.45□□□□□ -1.06
HDAC9-209ENST00000425071 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
HDAC9-209ENST00000425071 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-209ENST00000425071 BLOC1S3Q6QNY0 202 aa8.45□□□□□ -1.06
HDAC9-209ENST00000425071 SPDYE5A6NIY4 337 aa8.44□□□□□ -1.06
HDAC9-209ENST00000425071 CLK2P49760 499 aaKnown RBP8.44□□□□□ -1.06
HDAC9-209ENST00000425071 PUS10Q3MIT2 529 aaKnown RBP8.44□□□□□ -1.06
HDAC9-209ENST00000425071 PRPF38BQ5VTL8 546 aaKnown RBP8.44□□□□□ -1.06
HDAC9-209ENST00000425071 SLC27A5Q9Y2P5 690 aa8.44□□□□□ -1.06
HDAC9-209ENST00000425071 FMNL1O95466 1100 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-209ENST00000425071 COPS2P61201 443 aa8.43□□□□□ -1.06
HDAC9-209ENST00000425071 PCMTD1Q96MG8 357 aaPredicted RBP8.43□□□□□ -1.06
HDAC9-209ENST00000425071 NDUFV2P19404 249 aa8.41□□□□□ -1.06
HDAC9-209ENST00000425071 BRICD5Q6PL45 260 aa8.41□□□□□ -1.06
HDAC9-209ENST00000425071 THAP11Q96EK4 314 aa8.41□□□□□ -1.06
HDAC9-209ENST00000425071 ZBTB3Q9H5J0 574 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms