RNA–Protein interactions for RNA: ENST00000424968.5

LINC00240-202, long intergenic non-protein coding RNA 240, humanhuman

TSL 2

Gene LINC00240, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-202ENST00000424968 SOX11P35716 441 aa8.49□□□□□ -1.05
LINC00240-202ENST00000424968 ATN1P54259 1190 aaPredicted RBP8.49□□□□□ -1.05
LINC00240-202ENST00000424968 ASTLQ6HA08 431 aaPredicted RBP8.49□□□□□ -1.05
LINC00240-202ENST00000424968 METTL3Q86U44 580 aaKnown RBP8.49□□□□□ -1.05
LINC00240-202ENST00000424968 EN1Q05925 392 aaPredicted RBP8.48□□□□□ -1.05
LINC00240-202ENST00000424968 CFAP70Q5T0N1 1121 aa8.48□□□□□ -1.05
LINC00240-202ENST00000424968 TRIM35Q9UPQ4 493 aa8.48□□□□□ -1.05
LINC00240-202ENST00000424968 AP1G2O75843 785 aa8.47□□□□□ -1.05
LINC00240-202ENST00000424968 NUTM1Q86Y26 1132 aa8.47□□□□□ -1.05
LINC00240-202ENST00000424968 ZNF710Q8N1W2 664 aa8.47□□□□□ -1.05
LINC00240-202ENST00000424968 SPTLC1O15269 473 aa8.46□□□□□ -1.06
LINC00240-202ENST00000424968 PHF14O94880 888 aa8.46□□□□□ -1.06
LINC00240-202ENST00000424968 SRPK2P78362 688 aaKnown RBP8.46□□□□□ -1.06
LINC00240-202ENST00000424968 FAM177A1Q8N128 213 aaPredicted RBP8.46□□□□□ -1.06
LINC00240-202ENST00000424968 SLC39A7Q92504 469 aa8.46□□□□□ -1.06
LINC00240-202ENST00000424968 SIRT1Q96EB6 747 aa8.46□□□□□ -1.06
LINC00240-202ENST00000424968 KIF3CO14782 793 aa8.45□□□□□ -1.06
LINC00240-202ENST00000424968 LMOD1P29536 600 aaPredicted RBP8.45□□□□□ -1.06
LINC00240-202ENST00000424968 CCDC125Q86Z20 511 aa8.45□□□□□ -1.06
LINC00240-202ENST00000424968 PHOX2BQ99453 314 aa8.45□□□□□ -1.06
LINC00240-202ENST00000424968 NPDC1Q9NQX5 325 aaPredicted RBP8.45□□□□□ -1.06
LINC00240-202ENST00000424968 PALM3A6NDB9 673 aaPredicted RBP8.44□□□□□ -1.06
LINC00240-202ENST00000424968 NUTM2BA6NNL0 878 aaPredicted RBP8.44□□□□□ -1.06
LINC00240-202ENST00000424968 NUTM2EB1AL46 878 aaPredicted RBP8.44□□□□□ -1.06
LINC00240-202ENST00000424968 SEC24BO95487 1268 aa8.44□□□□□ -1.06
LINC00240-202ENST00000424968 C7P10643 843 aa8.44□□□□□ -1.06
LINC00240-202ENST00000424968 NUTM2DQ5VT03 806 aaPredicted RBP8.44□□□□□ -1.06
LINC00240-202ENST00000424968 NUTM2AQ8IVF1 878 aaPredicted RBP8.44□□□□□ -1.06
LINC00240-202ENST00000424968 SULF1Q8IWU6 871 aa8.44□□□□□ -1.06
LINC00240-202ENST00000424968 PNMA1Q8ND90 353 aa8.44□□□□□ -1.06
LINC00240-202ENST00000424968 IGSF5Q9NSI5 407 aa8.44□□□□□ -1.06
LINC00240-202ENST00000424968 LIMD1Q9UGP4 676 aa8.44□□□□□ -1.06
LINC00240-202ENST00000424968 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
LINC00240-202ENST00000424968 PXYLP1Q8TE99 480 aa8.43□□□□□ -1.06
LINC00240-202ENST00000424968 DRC1Q96MC2 740 aa8.43□□□□□ -1.06
LINC00240-202ENST00000424968 METRNQ9UJH8 293 aa8.43□□□□□ -1.06
LINC00240-202ENST00000424968 USP17L8P0C7I0 530 aa8.42□□□□□ -1.06
LINC00240-202ENST00000424968 NCLP19338 710 aaKnown RBP8.42□□□□□ -1.06
LINC00240-202ENST00000424968 BOLA1Q9Y3E2 137 aa8.42□□□□□ -1.06
LINC00240-202ENST00000424968 PRIM1P49642 420 aaKnown RBP8.41□□□□□ -1.06
LINC00240-202ENST00000424968 PRPF38BQ5VTL8 546 aaKnown RBP8.41□□□□□ -1.06
LINC00240-202ENST00000424968 SPIRE2Q8WWL2 714 aa8.41□□□□□ -1.06
LINC00240-202ENST00000424968 MRRFQ96E11 262 aaKnown RBP8.41□□□□□ -1.06
LINC00240-202ENST00000424968 TMEM121BQ9BXQ6 578 aaPredicted RBP8.41□□□□□ -1.06
LINC00240-202ENST00000424968 ANO8Q9HCE9 1232 aaPredicted RBP8.41□□□□□ -1.06
LINC00240-202ENST00000424968 RBM27Q9P2N5 1060 aaKnown RBP8.41□□□□□ -1.06
LINC00240-202ENST00000424968 UNCXA6NJT0 531 aa8.4□□□□□ -1.06
LINC00240-202ENST00000424968 PLCG2P16885 1265 aa8.4□□□□□ -1.06
LINC00240-202ENST00000424968 ARID4AP29374 1257 aaPredicted RBP8.4□□□□□ -1.06
LINC00240-202ENST00000424968 RSBN1LQ6PCB5 846 aaPredicted RBP8.4□□□□□ -1.06
LINC00240-202ENST00000424968 SLAIN1Q8ND83 568 aa8.4□□□□□ -1.06
LINC00240-202ENST00000424968 C8orf37Q96NL8 207 aa8.4□□□□□ -1.06
LINC00240-202ENST00000424968 CDHR5Q9HBB8 845 aa8.4□□□□□ -1.06
LINC00240-202ENST00000424968 TMEM88BA6NKF7 163 aa8.39□□□□□ -1.07
LINC00240-202ENST00000424968 PPM1GO15355 546 aaPredicted RBP8.39□□□□□ -1.07
LINC00240-202ENST00000424968 LILRB3O75022 631 aa8.39□□□□□ -1.07
LINC00240-202ENST00000424968 TCF3P15923 654 aa8.39□□□□□ -1.07
LINC00240-202ENST00000424968 SEMA3FQ13275 785 aa8.39□□□□□ -1.07
LINC00240-202ENST00000424968 TSR1Q2NL82 804 aaKnown RBP8.39□□□□□ -1.07
LINC00240-202ENST00000424968 ZNF326Q5BKZ1 582 aaKnown RBP8.39□□□□□ -1.07
LINC00240-202ENST00000424968 IER5LQ5T953 404 aa8.39□□□□□ -1.07
LINC00240-202ENST00000424968 TYW1BQ6NUM6 668 aa8.39□□□□□ -1.07
LINC00240-202ENST00000424968 L3MBTL3Q96JM7 780 aaPredicted RBP8.39□□□□□ -1.07
LINC00240-202ENST00000424968 TFIP11Q9UBB9 837 aaKnown RBP8.39□□□□□ -1.07
LINC00240-202ENST00000424968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.38□□□□□ -1.07
LINC00240-202ENST00000424968 ELOAQ14241 798 aaKnown RBP8.38□□□□□ -1.07
LINC00240-202ENST00000424968 SREK1Q8WXA9 508 aaKnown RBP8.38□□□□□ -1.07
LINC00240-202ENST00000424968 ALG2Q9H553 416 aa8.38□□□□□ -1.07
LINC00240-202ENST00000424968 ADGRG1Q9Y653 693 aa8.38□□□□□ -1.07
LINC00240-202ENST00000424968 CSPP1Q1MSJ5 1256 aa8.37□□□□□ -1.07
LINC00240-202ENST00000424968 RBM33Q96EV2 1170 aaKnown RBP8.37□□□□□ -1.07
LINC00240-202ENST00000424968 BCL2L13Q9BXK5 485 aa8.37□□□□□ -1.07
LINC00240-202ENST00000424968 DPY19L2Q6NUT2 758 aa8.36□□□□□ -1.07
LINC00240-202ENST00000424968 ADAMTS19Q8TE59 1207 aa8.36□□□□□ -1.07
LINC00240-202ENST00000424968 PTCD2Q8WV60 388 aaKnown RBP8.36□□□□□ -1.07
LINC00240-202ENST00000424968 ZBTB3Q9H5J0 574 aa8.36□□□□□ -1.07
LINC00240-202ENST00000424968 SF3A1Q15459 793 aaKnown RBP8.35□□□□□ -1.07
LINC00240-202ENST00000424968 HELBQ8NG08 1087 aaPredicted RBP8.35□□□□□ -1.07
LINC00240-202ENST00000424968 MAFBQ9Y5Q3 323 aaPredicted RBP8.34□□□□□ -1.07
LINC00240-202ENST00000424968 CD46P15529 392 aa8.33□□□□□ -1.08
LINC00240-202ENST00000424968 ZNF16P17020 682 aaPredicted RBP8.33□□□□□ -1.08
LINC00240-202ENST00000424968 ZC3H6P61129 1189 aaKnown RBP8.33□□□□□ -1.08
LINC00240-202ENST00000424968 USP46P62068 366 aa8.33□□□□□ -1.08
LINC00240-202ENST00000424968 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
LINC00240-202ENST00000424968 VAC14Q08AM6 782 aa8.33□□□□□ -1.08
LINC00240-202ENST00000424968 LHX8Q68G74 356 aa8.33□□□□□ -1.08
LINC00240-202ENST00000424968 TXNDC2Q86VQ3 553 aa8.33□□□□□ -1.08
LINC00240-202ENST00000424968 GJD4Q96KN9 370 aaPredicted RBP8.33□□□□□ -1.08
LINC00240-202ENST00000424968 OCEL1Q9H607 264 aa8.33□□□□□ -1.08
LINC00240-202ENST00000424968 PADI6Q6TGC4 694 aa8.32□□□□□ -1.08
LINC00240-202ENST00000424968 UBXN4Q92575 508 aa8.32□□□□□ -1.08
LINC00240-202ENST00000424968 KIAA1522Q9P206 1035 aaPredicted RBP8.32□□□□□ -1.08
LINC00240-202ENST00000424968 COLQQ9Y215 455 aaPredicted RBP8.32□□□□□ -1.08
LINC00240-202ENST00000424968 CARNS1A5YM72 827 aa8.31□□□□□ -1.08
LINC00240-202ENST00000424968 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
LINC00240-202ENST00000424968 ATP9BO43861 1147 aa8.31□□□□□ -1.08
LINC00240-202ENST00000424968 VAMP1P23763 118 aa8.31□□□□□ -1.08
LINC00240-202ENST00000424968 MARSP56192 900 aaKnown RBP8.31□□□□□ -1.08
LINC00240-202ENST00000424968 QPCTQ16769 361 aa8.31□□□□□ -1.08
LINC00240-202ENST00000424968 FBXO31Q5XUX0 539 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms