RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ZBTB7CA1YPR0 619 aa14.45□□□□□ -0.1
SEC61A1-202ENST00000424880 MCM4P33991 863 aa14.45□□□□□ -0.1
SEC61A1-202ENST00000424880 HNRNPMP52272 730 aaKnown RBP eCLIP14.45□□□□□ -0.1
SEC61A1-202ENST00000424880 CENPJQ9HC77 1338 aaPredicted RBP14.44□□□□□ -0.1
SEC61A1-202ENST00000424880 ABCC2Q92887 1545 aa14.44□□□□□ -0.1
SEC61A1-202ENST00000424880 PER1O15534 1290 aaPredicted RBP14.43□□□□□ -0.1
SEC61A1-202ENST00000424880 TRIM44Q96DX7 344 aaPredicted RBP14.43□□□□□ -0.1
SEC61A1-202ENST00000424880 ROCK2O75116 1388 aaKnown RBP14.43□□□□□ -0.1
SEC61A1-202ENST00000424880 FSD2A1L4K1 749 aa14.43□□□□□ -0.1
SEC61A1-202ENST00000424880 CANXP27824 592 aaKnown RBP14.43□□□□□ -0.1
SEC61A1-202ENST00000424880 GRPEL1Q9HAV7 217 aa14.42□□□□□ -0.1
SEC61A1-202ENST00000424880 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
SEC61A1-202ENST00000424880 DMRT2Q9Y5R5 561 aa14.42□□□□□ -0.1
SEC61A1-202ENST00000424880 GOLGA2Q08379 1002 aa14.41□□□□□ -0.1
SEC61A1-202ENST00000424880 KIAA1211Q6ZU35 1233 aa14.41□□□□□ -0.1
SEC61A1-202ENST00000424880 GAS2L3Q86XJ1 694 aa14.41□□□□□ -0.1
SEC61A1-202ENST00000424880 BCL2L13Q9BXK5 485 aa14.41□□□□□ -0.1
SEC61A1-202ENST00000424880 FAM13BQ9NYF5 915 aa14.41□□□□□ -0.1
SEC61A1-202ENST00000424880 TNNQ9UQP3 1299 aa14.41□□□□□ -0.1
SEC61A1-202ENST00000424880 ADGRL2O95490 1459 aa14.41□□□□□ -0.1
SEC61A1-202ENST00000424880 WDR43Q15061 677 aaKnown RBP eCLIP14.41□□□□□ -0.1
SEC61A1-202ENST00000424880 MBD5Q9P267 1494 aa14.4□□□□□ -0.1
SEC61A1-202ENST00000424880 CDC42BPBQ9Y5S2 1711 aa14.4□□□□□ -0.1
SEC61A1-202ENST00000424880 NEUROD2Q15784 382 aa14.4□□□□□ -0.1
SEC61A1-202ENST00000424880 CROCC2H7BZ55 1655 aa14.4□□□□□ -0.1
SEC61A1-202ENST00000424880 CLUAP1Q96AJ1 413 aa14.4□□□□□ -0.1
SEC61A1-202ENST00000424880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.39□□□□□ -0.112e-6■■■□□ 16.6
SEC61A1-202ENST00000424880 PARD3Q8TEW0 1356 aa14.39□□□□□ -0.11
SEC61A1-202ENST00000424880 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
SEC61A1-202ENST00000424880 MFAP1P55081 439 aaKnown RBP14.39□□□□□ -0.11
SEC61A1-202ENST00000424880 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.39□□□□□ -0.11
SEC61A1-202ENST00000424880 KDM5CP41229 1560 aa14.39□□□□□ -0.11
SEC61A1-202ENST00000424880 SAMD9LQ8IVG5 1584 aa14.38□□□□□ -0.11
SEC61A1-202ENST00000424880 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
SEC61A1-202ENST00000424880 APAF1O14727 1248 aa14.38□□□□□ -0.11
SEC61A1-202ENST00000424880 PRDM10Q9NQV6 1147 aa14.38□□□□□ -0.11
SEC61A1-202ENST00000424880 ANKRD30AQ9BXX3 1397 aa14.38□□□□□ -0.11
SEC61A1-202ENST00000424880 UPF2Q9HAU5 1272 aaKnown RBP14.37□□□□□ -0.11
SEC61A1-202ENST00000424880 PZPP20742 1482 aa14.37□□□□□ -0.11
SEC61A1-202ENST00000424880 MRE11P49959 708 aa14.37□□□□□ -0.11
SEC61A1-202ENST00000424880 ADGBQ8N7X0 1667 aa14.36□□□□□ -0.11
SEC61A1-202ENST00000424880 CALD1Q05682 793 aaKnown RBP14.36□□□□□ -0.11
SEC61A1-202ENST00000424880 MAP3K4Q9Y6R4 1608 aa14.36□□□□□ -0.11
SEC61A1-202ENST00000424880 PREX2Q70Z35 1606 aa14.36□□□□□ -0.11
SEC61A1-202ENST00000424880 ANKRD50Q9ULJ7 1429 aa14.36□□□□□ -0.11
SEC61A1-202ENST00000424880 TSPY4P0CV99 314 aa14.36□□□□□ -0.11
SEC61A1-202ENST00000424880 TSPY10P0CW01 314 aa14.36□□□□□ -0.11
SEC61A1-202ENST00000424880 ZCCHC11Q5TAX3 1644 aaKnown RBP14.35□□□□□ -0.11
SEC61A1-202ENST00000424880 PPRC1Q5VV67 1664 aaKnown RBP14.35□□□□□ -0.11
SEC61A1-202ENST00000424880 TBC1D32Q96NH3 1257 aa14.34□□□□□ -0.11
SEC61A1-202ENST00000424880 ZHX1Q9UKY1 873 aaPredicted RBP14.34□□□□□ -0.11
SEC61A1-202ENST00000424880 SHANK2Q9UPX8 1470 aa14.34□□□□□ -0.11
SEC61A1-202ENST00000424880 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
SEC61A1-202ENST00000424880 PRDM4Q9UKN5 801 aa14.34□□□□□ -0.11
SEC61A1-202ENST00000424880 SLFN5Q08AF3 891 aa14.33□□□□□ -0.12
SEC61A1-202ENST00000424880 PCDHB15Q9Y5E8 787 aa14.33□□□□□ -0.12
SEC61A1-202ENST00000424880 DISP3Q9P2K9 1392 aa14.33□□□□□ -0.12
SEC61A1-202ENST00000424880 AAMPQ13685 434 aa14.32□□□□□ -0.12
SEC61A1-202ENST00000424880 ARHGAP5Q13017 1502 aa14.32□□□□□ -0.12
SEC61A1-202ENST00000424880 ARHGEF5Q12774 1597 aa14.32□□□□□ -0.12
SEC61A1-202ENST00000424880 PDZRN3Q9UPQ7 1066 aa14.32□□□□□ -0.12
SEC61A1-202ENST00000424880 R3HCC1Q9Y3T6 440 aaKnown RBP14.32□□□□□ -0.12
SEC61A1-202ENST00000424880 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
SEC61A1-202ENST00000424880 NUP155O75694 1391 aa14.31□□□□□ -0.12
SEC61A1-202ENST00000424880 RRP7AQ9Y3A4 280 aaKnown RBP14.31□□□□□ -0.12
SEC61A1-202ENST00000424880 ARHGEF12Q9NZN5 1544 aa14.3□□□□□ -0.12
SEC61A1-202ENST00000424880 CCDC141Q6ZP82 1450 aa14.3□□□□□ -0.12
SEC61A1-202ENST00000424880 TPM2P07951 284 aa14.3□□□□□ -0.12
SEC61A1-202ENST00000424880 BLMP54132 1417 aaPredicted RBP14.3□□□□□ -0.12
SEC61A1-202ENST00000424880 KIAA1107Q9UPP5 1409 aa14.3□□□□□ -0.12
SEC61A1-202ENST00000424880 RLBP1P12271 317 aa14.3□□□□□ -0.12
SEC61A1-202ENST00000424880 PPP2R1AP30153 589 aa14.3□□□□□ -0.12
SEC61A1-202ENST00000424880 CHMP5Q9NZZ3 219 aa14.29□□□□□ -0.12
SEC61A1-202ENST00000424880 NLRP1Q9C000 1473 aa14.29□□□□□ -0.12
SEC61A1-202ENST00000424880 RIPK4P57078 832 aa14.29□□□□□ -0.12
SEC61A1-202ENST00000424880 C22orf23Q9BZE7 217 aa14.28□□□□□ -0.12
SEC61A1-202ENST00000424880 PLCH2O75038 1416 aa14.28□□□□□ -0.12
SEC61A1-202ENST00000424880 NPM1P06748 294 aaKnown RBP eCLIP14.28□□□□□ -0.12
SEC61A1-202ENST00000424880 VIRMAQ69YN4 1812 aaKnown RBP14.28□□□□□ -0.12
SEC61A1-202ENST00000424880 ZMYM4Q5VZL5 1548 aa14.28□□□□□ -0.12
SEC61A1-202ENST00000424880 RSPH4AQ5TD94 716 aa14.27□□□□□ -0.12
SEC61A1-202ENST00000424880 FGD1P98174 961 aa14.27□□□□□ -0.13
SEC61A1-202ENST00000424880 JARID2Q92833 1246 aaPredicted RBP14.27□□□□□ -0.13
SEC61A1-202ENST00000424880 MYO5CQ9NQX4 1742 aa14.27□□□□□ -0.13
SEC61A1-202ENST00000424880 XPCQ01831 940 aaPredicted RBP14.26□□□□□ -0.13
SEC61A1-202ENST00000424880 KNSTRNQ9Y448 316 aa14.26□□□□□ -0.13
SEC61A1-202ENST00000424880 MAPK8IP3Q9UPT6 1336 aa14.26□□□□□ -0.13
SEC61A1-202ENST00000424880 E9PCH4 1651 aa14.26□□□□□ -0.13
SEC61A1-202ENST00000424880 TNPO1Q92973 898 aaKnown RBP14.26□□□□□ -0.13
SEC61A1-202ENST00000424880 RALGAPBQ86X10 1494 aa14.26□□□□□ -0.13
SEC61A1-202ENST00000424880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.26□□□□□ -0.135e-7■□□□□ 10.1
SEC61A1-202ENST00000424880 TNNT2P45379 298 aaPredicted RBP14.25□□□□□ -0.13
SEC61A1-202ENST00000424880 ZNF521Q96K83 1311 aa14.25□□□□□ -0.13
SEC61A1-202ENST00000424880 PLEKHH2Q8IVE3 1493 aa14.25□□□□□ -0.13
SEC61A1-202ENST00000424880 INSRP06213 1382 aa14.25□□□□□ -0.13
SEC61A1-202ENST00000424880 NCLP19338 710 aaKnown RBP14.24□□□□□ -0.13
SEC61A1-202ENST00000424880 TESK2Q96S53 571 aa14.24□□□□□ -0.13
SEC61A1-202ENST00000424880 MSNP26038 577 aaKnown RBP14.23□□□□□ -0.13
SEC61A1-202ENST00000424880 EFCAB2Q5VUJ9 269 aa14.23□□□□□ -0.13
SEC61A1-202ENST00000424880 MPNDQ8N594 471 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms