RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 IL21Q9HBE4 155 aa7.02□□□□□ -1.29
SF3B1-205ENST00000424674 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.01□□□□□ -1.29
SF3B1-205ENST00000424674 GNPATO15228 680 aa7.01□□□□□ -1.29
SF3B1-205ENST00000424674 GPIHBP1Q8IV16 184 aa7.01□□□□□ -1.29
SF3B1-205ENST00000424674 BCANQ96GW7 911 aa7.01□□□□□ -1.29
SF3B1-205ENST00000424674 PRR14Q9BWN1 585 aa7.01□□□□□ -1.29
SF3B1-205ENST00000424674 OATP04181 439 aa7□□□□□ -1.29
SF3B1-205ENST00000424674 PXYLP1Q8TE99 480 aa7□□□□□ -1.29
SF3B1-205ENST00000424674 FECHP22830 423 aa6.99□□□□□ -1.29
SF3B1-205ENST00000424674 METTL3Q86U44 580 aaKnown RBP6.99□□□□□ -1.29
SF3B1-205ENST00000424674 TULP1O00294 542 aaPredicted RBP6.98□□□□□ -1.29
SF3B1-205ENST00000424674 COPS2P61201 443 aa6.97□□□□□ -1.29
SF3B1-205ENST00000424674 KMT5BQ4FZB7 885 aa6.97□□□□□ -1.29
SF3B1-205ENST00000424674 ZNF516Q92618 1163 aa6.97□□□□□ -1.29
SF3B1-205ENST00000424674 ARXQ96QS3 562 aa6.97□□□□□ -1.29
SF3B1-205ENST00000424674 PCDHB3Q9Y5E6 796 aa6.97□□□□□ -1.29
SF3B1-205ENST00000424674 CFHP08603 1231 aa6.96□□□□□ -1.3
SF3B1-205ENST00000424674 PRKCSHP14314 528 aaPredicted RBP6.95□□□□□ -1.3
SF3B1-205ENST00000424674 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
SF3B1-205ENST00000424674 SLC10A3P09131 477 aa6.94□□□□□ -1.3
SF3B1-205ENST00000424674 BLOC1S3Q6QNY0 202 aa6.94□□□□□ -1.3
SF3B1-205ENST00000424674 ZPR1O75312 459 aa6.93□□□□□ -1.3
SF3B1-205ENST00000424674 NKX2-3Q8TAU0 364 aa6.93□□□□□ -1.3
SF3B1-205ENST00000424674 PPP1R18Q6NYC8 613 aa6.92□□□□□ -1.3
SF3B1-205ENST00000424674 IRX2Q9BZI1 471 aaPredicted RBP6.92□□□□□ -1.3
SF3B1-205ENST00000424674 GGCXP38435 758 aa6.91□□□□□ -1.3
SF3B1-205ENST00000424674 MAP2K5Q13163 448 aa6.91□□□□□ -1.3
SF3B1-205ENST00000424674 RSPH4AQ5TD94 716 aa6.91□□□□□ -1.3
SF3B1-205ENST00000424674 NLRP7Q8WX94 980 aa6.91□□□□□ -1.3
SF3B1-205ENST00000424674 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.91□□□□□ -1.3
SF3B1-205ENST00000424674 TLL1O43897 1013 aa6.9□□□□□ -1.3
SF3B1-205ENST00000424674 RDH13Q8NBN7 331 aa6.9□□□□□ -1.3
SF3B1-205ENST00000424674 SULF1Q8IWU6 871 aa6.89□□□□□ -1.31
SF3B1-205ENST00000424674 PHOX2BQ99453 314 aa6.89□□□□□ -1.31
SF3B1-205ENST00000424674 DDX11L8A8MPP1 907 aa6.88□□□□□ -1.31
SF3B1-205ENST00000424674 NR1I2O75469 434 aa6.88□□□□□ -1.31
SF3B1-205ENST00000424674 PRKD2Q9BZL6 878 aa6.88□□□□□ -1.31
SF3B1-205ENST00000424674 PUS10Q3MIT2 529 aaKnown RBP6.86□□□□□ -1.31
SF3B1-205ENST00000424674 TMUB1Q9BVT8 246 aa6.86□□□□□ -1.31
SF3B1-205ENST00000424674 V9GY48 417 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-205ENST00000424674 MINK1Q8N4C8 1332 aaPredicted RBP6.85□□□□□ -1.31
SF3B1-205ENST00000424674 IRF6O14896 467 aa6.85□□□□□ -1.31
SF3B1-205ENST00000424674 ADH1BP00325 375 aa6.85□□□□□ -1.31
SF3B1-205ENST00000424674 LMOD2Q6P5Q4 547 aa6.85□□□□□ -1.31
SF3B1-205ENST00000424674 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.85□□□□□ -1.31
SF3B1-205ENST00000424674 CCDC102AQ96A19 550 aa6.85□□□□□ -1.31
SF3B1-205ENST00000424674 RNF223E7ERA6 249 aa6.84□□□□□ -1.31
SF3B1-205ENST00000424674 FUT2Q10981 343 aa6.84□□□□□ -1.31
SF3B1-205ENST00000424674 S1PR4O95977 384 aa6.83□□□□□ -1.32
SF3B1-205ENST00000424674 GCGRP47871 477 aa6.83□□□□□ -1.32
SF3B1-205ENST00000424674 ERICH6Q7L0X2 663 aa6.83□□□□□ -1.32
SF3B1-205ENST00000424674 SCUBE3Q8IX30 993 aa6.83□□□□□ -1.32
SF3B1-205ENST00000424674 ATP6V1AP38606 617 aa6.82□□□□□ -1.32
SF3B1-205ENST00000424674 MORN1Q5T089 497 aa6.82□□□□□ -1.32
SF3B1-205ENST00000424674 ANKLE1Q8NAG6 615 aa6.82□□□□□ -1.32
SF3B1-205ENST00000424674 SLC6A16Q9GZN6 736 aa6.82□□□□□ -1.32
SF3B1-205ENST00000424674 CD46P15529 392 aa6.81□□□□□ -1.32
SF3B1-205ENST00000424674 MDM2Q00987 491 aaPredicted RBP6.81□□□□□ -1.32
SF3B1-205ENST00000424674 LAPTM4AQ15012 233 aa6.81□□□□□ -1.32
SF3B1-205ENST00000424674 SPSB2Q99619 263 aa6.81□□□□□ -1.32
SF3B1-205ENST00000424674 TPRNQ4KMQ1 711 aa6.8□□□□□ -1.32
SF3B1-205ENST00000424674 Q6ZNB5 142 aa6.8□□□□□ -1.32
SF3B1-205ENST00000424674 TIMELESSQ9UNS1 1208 aa6.8□□□□□ -1.32
SF3B1-205ENST00000424674 PPEF1O14829 653 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-205ENST00000424674 GRIPAP1Q4V328 841 aa6.79□□□□□ -1.32
SF3B1-205ENST00000424674 GFRA3O60609 400 aa6.78□□□□□ -1.32
SF3B1-205ENST00000424674 FMNL1O95466 1100 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-205ENST00000424674 CLCN1P35523 988 aa6.78□□□□□ -1.32
SF3B1-205ENST00000424674 THAP11Q96EK4 314 aa6.78□□□□□ -1.32
SF3B1-205ENST00000424674 GPCPD1Q9NPB8 672 aa6.78□□□□□ -1.32
SF3B1-205ENST00000424674 SLC27A5Q9Y2P5 690 aa6.78□□□□□ -1.32
SF3B1-205ENST00000424674 NRG2O14511 850 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-205ENST00000424674 SLC19A1P41440 591 aa6.77□□□□□ -1.33
SF3B1-205ENST00000424674 HOMEZQ8IX15 550 aa6.77□□□□□ -1.33
SF3B1-205ENST00000424674 EMID1Q96A84 441 aaPredicted RBP6.77□□□□□ -1.33
SF3B1-205ENST00000424674 KDM4AO75164 1064 aa6.76□□□□□ -1.33
SF3B1-205ENST00000424674 ZMYND10O75800 440 aa6.76□□□□□ -1.33
SF3B1-205ENST00000424674 BARGINQ6ZT62 677 aa6.76□□□□□ -1.33
SF3B1-205ENST00000424674 KRI1Q8N9T8 703 aaKnown RBP6.76□□□□□ -1.33
SF3B1-205ENST00000424674 ZC3H15Q8WU90 426 aaKnown RBP6.76□□□□□ -1.33
SF3B1-205ENST00000424674 FAM217BQ9NTX9 383 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-205ENST00000424674 SALL2Q9Y467 1007 aaPredicted RBP6.76□□□□□ -1.33
SF3B1-205ENST00000424674 SPRYD7Q5W111 196 aa6.75□□□□□ -1.33
SF3B1-205ENST00000424674 RNF19BQ6ZMZ0 732 aa6.75□□□□□ -1.33
SF3B1-205ENST00000424674 LIAT1Q6ZQX7 453 aa6.75□□□□□ -1.33
SF3B1-205ENST00000424674 PDZRN3Q9UPQ7 1066 aa6.75□□□□□ -1.33
SF3B1-205ENST00000424674 USP46P62068 366 aa6.74□□□□□ -1.33
SF3B1-205ENST00000424674 Q3C1V9 767 aa6.74□□□□□ -1.33
SF3B1-205ENST00000424674 MSS51Q4VC12 460 aa6.74□□□□□ -1.33
SF3B1-205ENST00000424674 PLA2G2CQ5R387 149 aa6.74□□□□□ -1.33
SF3B1-205ENST00000424674 BRICD5Q6PL45 260 aa6.74□□□□□ -1.33
SF3B1-205ENST00000424674 ZNF598Q86UK7 904 aaKnown RBP6.74□□□□□ -1.33
SF3B1-205ENST00000424674 PRDM9Q9NQV7 894 aa6.74□□□□□ -1.33
SF3B1-205ENST00000424674 ZNF697Q5TEC3 545 aa6.73□□□□□ -1.33
SF3B1-205ENST00000424674 FAM160A2Q8N612 972 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-205ENST00000424674 FCF1Q9Y324 198 aaKnown RBP6.73□□□□□ -1.33
SF3B1-205ENST00000424674 HOXA2O43364 376 aa6.72□□□□□ -1.33
SF3B1-205ENST00000424674 TTLL12Q14166 644 aaPredicted RBP6.72□□□□□ -1.33
SF3B1-205ENST00000424674 TRIM67Q6ZTA4 783 aa6.72□□□□□ -1.33
SF3B1-205ENST00000424674 REPIN1Q9BWE0 567 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms