RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 KIF3BO15066 747 aa11.41□□□□□ -0.58
VPS8-204ENST00000424463 ZFYVE16Q7Z3T8 1539 aa11.4□□□□□ -0.58
VPS8-204ENST00000424463 CCDC144AA2RUR9 1427 aa11.4□□□□□ -0.58
VPS8-204ENST00000424463 CCDC7Q96M83 1385 aa11.39□□□□□ -0.59
VPS8-204ENST00000424463 ATP7AQ04656 1500 aa11.38□□□□□ -0.59
VPS8-204ENST00000424463 IQGAP3Q86VI3 1631 aa11.38□□□□□ -0.59
VPS8-204ENST00000424463 CANXP27824 592 aaKnown RBP11.38□□□□□ -0.59
VPS8-204ENST00000424463 CARD11Q9BXL7 1154 aa11.38□□□□□ -0.59
VPS8-204ENST00000424463 KIF7Q2M1P5 1343 aa11.38□□□□□ -0.59
VPS8-204ENST00000424463 UHRF1BP1Q6BDS2 1440 aa11.38□□□□□ -0.59
VPS8-204ENST00000424463 MAGI2Q86UL8 1455 aa11.38□□□□□ -0.59
VPS8-204ENST00000424463 USP47Q96K76 1375 aa11.37□□□□□ -0.59
VPS8-204ENST00000424463 CLSTN1O94985 981 aa11.37□□□□□ -0.59
VPS8-204ENST00000424463 GRIPAP1Q4V328 841 aa11.37□□□□□ -0.59
VPS8-204ENST00000424463 DHX29Q7Z478 1369 aaKnown RBP11.37□□□□□ -0.59
VPS8-204ENST00000424463 RAPGEF3O95398 923 aa11.36□□□□□ -0.59
VPS8-204ENST00000424463 WWC1Q8IX03 1113 aa11.36□□□□□ -0.59
VPS8-204ENST00000424463 NBPF1Q3BBV0 1214 aa11.36□□□□□ -0.59
VPS8-204ENST00000424463 INO80Q9ULG1 1556 aaPredicted RBP11.35□□□□□ -0.59
VPS8-204ENST00000424463 CCER2I3L3R5 266 aa11.35□□□□□ -0.59
VPS8-204ENST00000424463 RRP9O43818 475 aaKnown RBP11.35□□□□□ -0.59
VPS8-204ENST00000424463 ST20-MTHFSA0A0A6YYL1 179 aa11.34□□□□□ -0.59
VPS8-204ENST00000424463 ZNF518AQ6AHZ1 1483 aa11.33□□□□□ -0.6
VPS8-204ENST00000424463 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
VPS8-204ENST00000424463 A2MP01023 1474 aa11.33□□□□□ -0.6
VPS8-204ENST00000424463 ROCK2O75116 1388 aaKnown RBP11.32□□□□□ -0.6
VPS8-204ENST00000424463 PRAG1Q86YV5 1406 aa11.32□□□□□ -0.6
VPS8-204ENST00000424463 CNTLNQ9NXG0 1405 aa11.32□□□□□ -0.6
VPS8-204ENST00000424463 KANK1Q14678 1352 aa11.32□□□□□ -0.6
VPS8-204ENST00000424463 ATP10AO60312 1499 aa11.32□□□□□ -0.6
VPS8-204ENST00000424463 POGZQ7Z3K3 1410 aa11.32□□□□□ -0.6
VPS8-204ENST00000424463 KIDINS220Q9ULH0 1771 aa11.31□□□□□ -0.6
VPS8-204ENST00000424463 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
VPS8-204ENST00000424463 GGT6Q6P531 493 aa11.31□□□□□ -0.6
VPS8-204ENST00000424463 FAM43BQ6ZT52 329 aaPredicted RBP11.31□□□□□ -0.6
VPS8-204ENST00000424463 FAM69CQ0P6D2 419 aa11.31□□□□□ -0.6
VPS8-204ENST00000424463 RIMBP3CA6NJZ7 1639 aa11.31□□□□□ -0.6
VPS8-204ENST00000424463 RIMBP3BA6NNM3 1639 aa11.31□□□□□ -0.6
VPS8-204ENST00000424463 RIMBP3Q9UFD9 1639 aa11.31□□□□□ -0.6
VPS8-204ENST00000424463 KDM5CP41229 1560 aa11.3□□□□□ -0.6
VPS8-204ENST00000424463 E9PCH4 1651 aa11.3□□□□□ -0.6
VPS8-204ENST00000424463 BCORL1Q5H9F3 1711 aa11.3□□□□□ -0.6
VPS8-204ENST00000424463 CALD1Q05682 793 aaKnown RBP11.3□□□□□ -0.6
VPS8-204ENST00000424463 CCDC184Q52MB2 194 aa11.3□□□□□ -0.6
VPS8-204ENST00000424463 ARID4BQ4LE39 1312 aaPredicted RBP11.3□□□□□ -0.6
VPS8-204ENST00000424463 DEPDC5O75140 1603 aa11.29□□□□□ -0.6
VPS8-204ENST00000424463 PTPRTO14522 1441 aa11.29□□□□□ -0.6
VPS8-204ENST00000424463 ARID3AQ99856 593 aa11.28□□□□□ -0.6
VPS8-204ENST00000424463 PRKRIP1Q9H875 184 aaPredicted RBP11.28□□□□□ -0.6
VPS8-204ENST00000424463 VWDEQ8N2E2 1590 aa11.27□□□□□ -0.6
VPS8-204ENST00000424463 MLH3Q9UHC1 1453 aa11.27□□□□□ -0.61
VPS8-204ENST00000424463 MROH1Q8NDA8 1641 aa11.27□□□□□ -0.61
VPS8-204ENST00000424463 HSP90AA2PQ14568 343 aaPredicted RBP11.27□□□□□ -0.61
VPS8-204ENST00000424463 NEO1Q92859 1461 aa11.27□□□□□ -0.61
VPS8-204ENST00000424463 PLCD4Q9BRC7 762 aa11.26□□□□□ -0.61
VPS8-204ENST00000424463 PRDM16Q9HAZ2 1276 aa11.26□□□□□ -0.61
VPS8-204ENST00000424463 CFAP74Q9C0B2 1584 aa11.26□□□□□ -0.61
VPS8-204ENST00000424463 TRPM2O94759 1503 aa11.25□□□□□ -0.61
VPS8-204ENST00000424463 TET3O43151 1660 aa11.25□□□□□ -0.61
VPS8-204ENST00000424463 PRDM15P57071 1507 aaPredicted RBP11.25□□□□□ -0.61
VPS8-204ENST00000424463 FRMPD1Q5SYB0 1578 aa11.25□□□□□ -0.61
VPS8-204ENST00000424463 ZNF830Q96NB3 372 aaPredicted RBP11.25□□□□□ -0.61
VPS8-204ENST00000424463 TRPM1Q7Z4N2 1603 aa11.25□□□□□ -0.61
VPS8-204ENST00000424463 WASHC2CQ9Y4E1 1318 aa11.25□□□□□ -0.61
VPS8-204ENST00000424463 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
VPS8-204ENST00000424463 CLTCL1P53675 1640 aa11.24□□□□□ -0.61
VPS8-204ENST00000424463 EIF2AK4Q9P2K8 1649 aaKnown RBP11.24□□□□□ -0.61
VPS8-204ENST00000424463 RGS22Q8NE09 1264 aa11.24□□□□□ -0.61
VPS8-204ENST00000424463 CERS3Q8IU89 383 aa11.24□□□□□ -0.61
VPS8-204ENST00000424463 PSMD1Q99460 953 aa11.24□□□□□ -0.61
VPS8-204ENST00000424463 GPRASP1Q5JY77 1395 aa11.24□□□□□ -0.61
VPS8-204ENST00000424463 HECW2Q9P2P5 1572 aa11.23□□□□□ -0.61
VPS8-204ENST00000424463 CHGAP10645 457 aaKnown RBP11.23□□□□□ -0.61
VPS8-204ENST00000424463 SPHKAPQ2M3C7 1700 aa11.23□□□□□ -0.61
VPS8-204ENST00000424463 TESK2Q96S53 571 aa11.23□□□□□ -0.61
VPS8-204ENST00000424463 YEATS2Q9ULM3 1422 aa11.23□□□□□ -0.61
VPS8-204ENST00000424463 ABCA6Q8N139 1617 aa11.22□□□□□ -0.61
VPS8-204ENST00000424463 MAP3K4Q9Y6R4 1608 aa11.22□□□□□ -0.61
VPS8-204ENST00000424463 VGFO15240 615 aaPredicted RBP11.22□□□□□ -0.61
VPS8-204ENST00000424463 RGS3P49796 1198 aa11.22□□□□□ -0.61
VPS8-204ENST00000424463 ZNF692Q9BU19 519 aaPredicted RBP11.22□□□□□ -0.61
VPS8-204ENST00000424463 MCCP23508 829 aa11.21□□□□□ -0.62
VPS8-204ENST00000424463 MRS2Q9HD23 443 aa11.21□□□□□ -0.62
VPS8-204ENST00000424463 PPRC1Q5VV67 1664 aaKnown RBP11.21□□□□□ -0.62
VPS8-204ENST00000424463 POLR1AO95602 1720 aaPredicted RBP11.21□□□□□ -0.62
VPS8-204ENST00000424463 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
VPS8-204ENST00000424463 FAM9BQ8IZU0 186 aa11.2□□□□□ -0.62
VPS8-204ENST00000424463 EFCAB6Q5THR3 1501 aa11.2□□□□□ -0.62
VPS8-204ENST00000424463 GLI2P10070 1586 aa11.2□□□□□ -0.62
VPS8-204ENST00000424463 MMP14P50281 582 aa11.2□□□□□ -0.62
VPS8-204ENST00000424463 NPATQ14207 1427 aa11.2□□□□□ -0.62
VPS8-204ENST00000424463 CENPJQ9HC77 1338 aaPredicted RBP11.19□□□□□ -0.62
VPS8-204ENST00000424463 HNRNPUQ00839 825 aaKnown RBP eCLIP11.19□□□□□ -0.62
VPS8-204ENST00000424463 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
VPS8-204ENST00000424463 DISP3Q9P2K9 1392 aa11.19□□□□□ -0.62
VPS8-204ENST00000424463 CEP152O94986 1710 aa11.19□□□□□ -0.62
VPS8-204ENST00000424463 LMTK2Q8IWU2 1503 aa11.19□□□□□ -0.62
VPS8-204ENST00000424463 FAM193AP78312 1265 aa11.19□□□□□ -0.62
VPS8-204ENST00000424463 RNF17Q9BXT8 1623 aaKnown RBP11.19□□□□□ -0.62
VPS8-204ENST00000424463 DIP2CQ9Y2E4 1556 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms