RNA–Protein interactions for RNA: ENST00000424354.5

SREBF2-202, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 5,699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-202ENST00000424354 FAM161AQ3B820 660 aa17.22■□□□□ 0.35
SREBF2-202ENST00000424354 PLCH2O75038 1416 aa17.22■□□□□ 0.35
SREBF2-202ENST00000424354 PDE4AP27815 886 aa17.22■□□□□ 0.35
SREBF2-202ENST00000424354 SKOR2Q2VWA4 1001 aaPredicted RBP17.21■□□□□ 0.35
SREBF2-202ENST00000424354 CHMP4AQ9BY43 222 aa17.21■□□□□ 0.35
SREBF2-202ENST00000424354 FANCAO15360 1455 aa17.21■□□□□ 0.35
SREBF2-202ENST00000424354 DHX57Q6P158 1386 aaKnown RBP17.21■□□□□ 0.35
SREBF2-202ENST00000424354 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
SREBF2-202ENST00000424354 HMMRO75330 724 aa17.21■□□□□ 0.35
SREBF2-202ENST00000424354 SOX12O15370 315 aa17.2■□□□□ 0.34
SREBF2-202ENST00000424354 KIF15Q9NS87 1388 aa17.2■□□□□ 0.34
SREBF2-202ENST00000424354 ST18O60284 1047 aa17.19■□□□□ 0.34
SREBF2-202ENST00000424354 WASHC2CQ9Y4E1 1318 aa17.19■□□□□ 0.34
SREBF2-202ENST00000424354 NUP153P49790 1475 aaKnown RBP17.19■□□□□ 0.34
SREBF2-202ENST00000424354 GOLGA6L1Q8N7Z2 621 aa17.19■□□□□ 0.34
SREBF2-202ENST00000424354 FGD6Q6ZV73 1430 aa17.18■□□□□ 0.34
SREBF2-202ENST00000424354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.18■□□□□ 0.342e-7■■■■■ 99
SREBF2-202ENST00000424354 EID1Q9Y6B2 187 aa17.18■□□□□ 0.34
SREBF2-202ENST00000424354 ZBED9Q6R2W3 1325 aa17.18■□□□□ 0.34
SREBF2-202ENST00000424354 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
SREBF2-202ENST00000424354 KIF3BO15066 747 aa17.18■□□□□ 0.34
SREBF2-202ENST00000424354 CDK13Q14004 1512 aaKnown RBP17.17■□□□□ 0.34
SREBF2-202ENST00000424354 MYBBP1AQ9BQG0 1328 aaKnown RBP17.17■□□□□ 0.34
SREBF2-202ENST00000424354 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
SREBF2-202ENST00000424354 L3MBTL2Q969R5 705 aa17.16■□□□□ 0.34
SREBF2-202ENST00000424354 GPATCH3Q96I76 525 aa17.16■□□□□ 0.34
SREBF2-202ENST00000424354 NUP155O75694 1391 aa17.16■□□□□ 0.34
SREBF2-202ENST00000424354 MAPKBP1O60336 1514 aa17.16■□□□□ 0.34
SREBF2-202ENST00000424354 HDAC5Q9UQL6 1122 aa17.16■□□□□ 0.34
SREBF2-202ENST00000424354 KIAA1107Q9UPP5 1409 aa17.16■□□□□ 0.34
SREBF2-202ENST00000424354 ZNF518AQ6AHZ1 1483 aa17.15■□□□□ 0.34
SREBF2-202ENST00000424354 ABCC10Q5T3U5 1492 aa17.15■□□□□ 0.34
SREBF2-202ENST00000424354 SAFB2Q14151 953 aaKnown RBP eCLIP17.15■□□□□ 0.34
SREBF2-202ENST00000424354 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
SREBF2-202ENST00000424354 STK31Q9BXU1 1019 aa17.13■□□□□ 0.33
SREBF2-202ENST00000424354 TRIM6-TRIM34B2RNG4 842 aa17.12■□□□□ 0.33
SREBF2-202ENST00000424354 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
SREBF2-202ENST00000424354 NOC3LQ8WTT2 800 aaKnown RBP17.11■□□□□ 0.33
SREBF2-202ENST00000424354 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
SREBF2-202ENST00000424354 DDX49Q9Y6V7 483 aaKnown RBP17.11■□□□□ 0.33
SREBF2-202ENST00000424354 CLUAP1Q96AJ1 413 aa17.1■□□□□ 0.33
SREBF2-202ENST00000424354 STK26Q9P289 416 aa17.1■□□□□ 0.33
SREBF2-202ENST00000424354 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
SREBF2-202ENST00000424354 VSIG10Q8N0Z9 540 aa17.1■□□□□ 0.33
SREBF2-202ENST00000424354 ZCCHC11Q5TAX3 1644 aaKnown RBP17.1■□□□□ 0.33
SREBF2-202ENST00000424354 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
SREBF2-202ENST00000424354 KIF16BQ96L93 1317 aa17.09■□□□□ 0.33
SREBF2-202ENST00000424354 PRKRIP1Q9H875 184 aaPredicted RBP17.08■□□□□ 0.33
SREBF2-202ENST00000424354 CGNL1Q0VF96 1302 aa17.08■□□□□ 0.33
SREBF2-202ENST00000424354 ZNF644Q9H582 1327 aaPredicted RBP17.08■□□□□ 0.33
SREBF2-202ENST00000424354 CCDC146Q8IYE0 955 aa17.08■□□□□ 0.33
SREBF2-202ENST00000424354 PAK3O75914 559 aaPredicted RBP17.08■□□□□ 0.32
SREBF2-202ENST00000424354 HSP90B1P14625 803 aaKnown RBP17.08■□□□□ 0.32
SREBF2-202ENST00000424354 STAC3Q96MF2 364 aa17.08■□□□□ 0.32
SREBF2-202ENST00000424354 ATP6V1DQ9Y5K8 247 aa17.07■□□□□ 0.32
SREBF2-202ENST00000424354 EXOC6Q8TAG9 804 aa17.07■□□□□ 0.32
SREBF2-202ENST00000424354 MAGI2Q86UL8 1455 aa17.07■□□□□ 0.32
SREBF2-202ENST00000424354 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
SREBF2-202ENST00000424354 ARAP3Q8WWN8 1544 aa17.07■□□□□ 0.32
SREBF2-202ENST00000424354 CSB-PGBD3P0DP91 1061 aa17.06■□□□□ 0.32
SREBF2-202ENST00000424354 MAGI3Q5TCQ9 1506 aa17.06■□□□□ 0.32
SREBF2-202ENST00000424354 C9orf84Q5VXU9 1444 aa17.06■□□□□ 0.32
SREBF2-202ENST00000424354 CFAP43Q8NDM7 1665 aa17.06■□□□□ 0.32
SREBF2-202ENST00000424354 TERF2IPQ9NYB0 399 aa17.06■□□□□ 0.32
SREBF2-202ENST00000424354 E9PSI1 815 aa17.05■□□□□ 0.32
SREBF2-202ENST00000424354 CCDC9Q9Y3X0 531 aaKnown RBP17.05■□□□□ 0.32
SREBF2-202ENST00000424354 SLC4A3P48751 1232 aa17.05■□□□□ 0.32
SREBF2-202ENST00000424354 RTEL1-TNFRSF6BF6WH68 1400 aa17.04■□□□□ 0.32
SREBF2-202ENST00000424354 TPM3P06753 285 aa17.04■□□□□ 0.32
SREBF2-202ENST00000424354 ROCK1Q13464 1354 aa17.04■□□□□ 0.32
SREBF2-202ENST00000424354 GLI2P10070 1586 aa17.03■□□□□ 0.32
SREBF2-202ENST00000424354 CRBNQ96SW2 442 aa17.03■□□□□ 0.32
SREBF2-202ENST00000424354 CAMSAP2Q08AD1 1489 aa17.03■□□□□ 0.32
SREBF2-202ENST00000424354 NOL8Q76FK4 1167 aaKnown RBP17.03■□□□□ 0.32
SREBF2-202ENST00000424354 DMRT2Q9Y5R5 561 aa17.02■□□□□ 0.32
SREBF2-202ENST00000424354 CHMP4CQ96CF2 233 aa17.02■□□□□ 0.32
SREBF2-202ENST00000424354 CHMP5Q9NZZ3 219 aa17.02■□□□□ 0.31
SREBF2-202ENST00000424354 CLSTN1O94985 981 aa17.01■□□□□ 0.31
SREBF2-202ENST00000424354 ZKSCAN2Q63HK3 967 aa17.01■□□□□ 0.31
SREBF2-202ENST00000424354 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.01■□□□□ 0.31
SREBF2-202ENST00000424354 NGEFQ8N5V2 710 aa17■□□□□ 0.31
SREBF2-202ENST00000424354 GOLGA6L19H0YKK7 550 aa17■□□□□ 0.31
SREBF2-202ENST00000424354 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
SREBF2-202ENST00000424354 GPS2Q13227 327 aa16.99■□□□□ 0.31
SREBF2-202ENST00000424354 GORABQ5T7V8 394 aa16.99■□□□□ 0.31
SREBF2-202ENST00000424354 MYO5CQ9NQX4 1742 aa16.98■□□□□ 0.31
SREBF2-202ENST00000424354 SF3A1Q15459 793 aaKnown RBP16.98■□□□□ 0.31
SREBF2-202ENST00000424354 SLC4A10Q6U841 1118 aa16.98■□□□□ 0.31
SREBF2-202ENST00000424354 PLIN1O60240 522 aa16.98■□□□□ 0.31
SREBF2-202ENST00000424354 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
SREBF2-202ENST00000424354 FOXD4L5Q5VV16 416 aaPredicted RBP16.98■□□□□ 0.31
SREBF2-202ENST00000424354 FOXD4L4Q8WXT5 416 aaPredicted RBP16.98■□□□□ 0.31
SREBF2-202ENST00000424354 GPATCH8Q9UKJ3 1502 aaKnown RBP16.97■□□□□ 0.31
SREBF2-202ENST00000424354 DAPK1P53355 1430 aa16.97■□□□□ 0.31
SREBF2-202ENST00000424354 ANKRD50Q9ULJ7 1429 aa16.97■□□□□ 0.31
SREBF2-202ENST00000424354 ANKRD45Q5TZF3 282 aa16.97■□□□□ 0.31
SREBF2-202ENST00000424354 ATP10AO60312 1499 aa16.96■□□□□ 0.31
SREBF2-202ENST00000424354 ISY1Q9ULR0 285 aaKnown RBP16.96■□□□□ 0.31
SREBF2-202ENST00000424354 PANK3Q9H999 370 aa16.96■□□□□ 0.31
SREBF2-202ENST00000424354 SHANK2Q9UPX8 1470 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms