RNA–Protein interactions for RNA: ENST00000423670.1

SCYL3-204, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-204ENST00000423670 SYNMO15061 1565 aa12.63□□□□□ -0.39
SCYL3-204ENST00000423670 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
SCYL3-204ENST00000423670 KIF13AQ9H1H9 1805 aa12.63□□□□□ -0.39
SCYL3-204ENST00000423670 PER1O15534 1290 aaPredicted RBP12.63□□□□□ -0.39
SCYL3-204ENST00000423670 HNRNPUQ00839 825 aaKnown RBP eCLIP12.63□□□□□ -0.39
SCYL3-204ENST00000423670 FAM9BQ8IZU0 186 aa12.62□□□□□ -0.39
SCYL3-204ENST00000423670 PIK3C2BO00750 1634 aa12.62□□□□□ -0.39
SCYL3-204ENST00000423670 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
SCYL3-204ENST00000423670 CHGAP10645 457 aaKnown RBP12.61□□□□□ -0.39
SCYL3-204ENST00000423670 PPLO60437 1756 aa12.61□□□□□ -0.39
SCYL3-204ENST00000423670 TMF1P82094 1093 aa12.6□□□□□ -0.39
SCYL3-204ENST00000423670 SUPT16HQ9Y5B9 1047 aaKnown RBP12.6□□□□□ -0.39
SCYL3-204ENST00000423670 ZC3H13Q5T200 1668 aaKnown RBP12.6□□□□□ -0.39
SCYL3-204ENST00000423670 PANK3Q9H999 370 aa12.58□□□□□ -0.39
SCYL3-204ENST00000423670 PIK3C2GO75747 1445 aa12.58□□□□□ -0.4
SCYL3-204ENST00000423670 IDI1Q13907 227 aa12.58□□□□□ -0.4
SCYL3-204ENST00000423670 PARD3Q8TEW0 1356 aa12.56□□□□□ -0.4
SCYL3-204ENST00000423670 REREQ9P2R6 1566 aa12.56□□□□□ -0.4
SCYL3-204ENST00000423670 PREX1Q8TCU6 1659 aa12.55□□□□□ -0.4
SCYL3-204ENST00000423670 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
SCYL3-204ENST00000423670 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
SCYL3-204ENST00000423670 PNISRQ8TF01 805 aaKnown RBP12.55□□□□□ -0.4
SCYL3-204ENST00000423670 C14orf93Q9H972 538 aaKnown RBP12.55□□□□□ -0.4
SCYL3-204ENST00000423670 NEXMIFQ5QGS0 1516 aa12.55□□□□□ -0.4
SCYL3-204ENST00000423670 ADGRB1O14514 1584 aa12.55□□□□□ -0.4
SCYL3-204ENST00000423670 RALBP1Q15311 655 aa12.55□□□□□ -0.4
SCYL3-204ENST00000423670 RPGRIP1LQ68CZ1 1315 aa12.55□□□□□ -0.4
SCYL3-204ENST00000423670 AGLP35573 1532 aa12.55□□□□□ -0.4
SCYL3-204ENST00000423670 MYBBP1AQ9BQG0 1328 aaKnown RBP12.54□□□□□ -0.4
SCYL3-204ENST00000423670 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
SCYL3-204ENST00000423670 SETBP1Q9Y6X0 1596 aa12.54□□□□□ -0.4
SCYL3-204ENST00000423670 MYO5BQ9ULV0 1848 aa12.54□□□□□ -0.4
SCYL3-204ENST00000423670 EIF3AQ14152 1382 aaKnown RBP12.53□□□□□ -0.4
SCYL3-204ENST00000423670 MYOM1P52179 1685 aa12.53□□□□□ -0.4
SCYL3-204ENST00000423670 ERVK-7P63135 1459 aa12.53□□□□□ -0.4
SCYL3-204ENST00000423670 TMEM132EQ6IEE7 984 aa12.53□□□□□ -0.4
SCYL3-204ENST00000423670 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.4
SCYL3-204ENST00000423670 BRD4O60885 1362 aaPredicted RBP12.52□□□□□ -0.41
SCYL3-204ENST00000423670 SLC52A1Q9NWF4 448 aa12.52□□□□□ -0.41
SCYL3-204ENST00000423670 TMEM131LA2VDJ0 1609 aa12.52□□□□□ -0.41
SCYL3-204ENST00000423670 MYO3AQ8NEV4 1616 aa12.52□□□□□ -0.41
SCYL3-204ENST00000423670 ZBED9Q6R2W3 1325 aa12.51□□□□□ -0.41
SCYL3-204ENST00000423670 TMC1Q8TDI8 760 aa12.51□□□□□ -0.41
SCYL3-204ENST00000423670 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
SCYL3-204ENST00000423670 TRAK1Q9UPV9 953 aa12.5□□□□□ -0.41
SCYL3-204ENST00000423670 ARHGEF40Q8TER5 1519 aa12.5□□□□□ -0.41
SCYL3-204ENST00000423670 CLTCQ00610 1675 aaKnown RBP12.5□□□□□ -0.41
SCYL3-204ENST00000423670 SENP3-EIF4A1A0A087X0R7 540 aa12.49□□□□□ -0.41
SCYL3-204ENST00000423670 FKBP8Q14318 412 aa12.49□□□□□ -0.41
SCYL3-204ENST00000423670 KDM5AP29375 1690 aaKnown RBP12.49□□□□□ -0.41
SCYL3-204ENST00000423670 MLECQ14165 292 aa12.49□□□□□ -0.41
SCYL3-204ENST00000423670 AMER1Q5JTC6 1135 aaPredicted RBP12.49□□□□□ -0.41
SCYL3-204ENST00000423670 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
SCYL3-204ENST00000423670 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
SCYL3-204ENST00000423670 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
SCYL3-204ENST00000423670 CDCA8Q53HL2 280 aa12.48□□□□□ -0.41
SCYL3-204ENST00000423670 CENPJQ9HC77 1338 aaPredicted RBP12.48□□□□□ -0.41
SCYL3-204ENST00000423670 ZFYVE9O95405 1425 aa12.47□□□□□ -0.41
SCYL3-204ENST00000423670 SENP3Q9H4L4 574 aaPredicted RBP12.47□□□□□ -0.41
SCYL3-204ENST00000423670 PPP6R1Q9UPN7 881 aa12.47□□□□□ -0.41
SCYL3-204ENST00000423670 ASXL1Q8IXJ9 1541 aa12.46□□□□□ -0.41
SCYL3-204ENST00000423670 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.42
SCYL3-204ENST00000423670 SPATA31D1Q6ZQQ2 1576 aa12.45□□□□□ -0.42
SCYL3-204ENST00000423670 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
SCYL3-204ENST00000423670 ARHGEF28Q8N1W1 1705 aaKnown RBP12.44□□□□□ -0.42
SCYL3-204ENST00000423670 BCANQ96GW7 911 aa12.44□□□□□ -0.42
SCYL3-204ENST00000423670 KNSTRNQ9Y448 316 aa12.44□□□□□ -0.42
SCYL3-204ENST00000423670 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
SCYL3-204ENST00000423670 A2ML1A8K2U0 1454 aa12.42□□□□□ -0.42
SCYL3-204ENST00000423670 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
SCYL3-204ENST00000423670 ZMYM3Q14202 1370 aa12.41□□□□□ -0.42
SCYL3-204ENST00000423670 TULP4Q9NRJ4 1543 aa12.41□□□□□ -0.42
SCYL3-204ENST00000423670 NPC1L1Q9UHC9 1359 aa12.4□□□□□ -0.42
SCYL3-204ENST00000423670 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
SCYL3-204ENST00000423670 NEFLP07196 543 aa12.39□□□□□ -0.43
SCYL3-204ENST00000423670 IRX6P78412 446 aaPredicted RBP12.39□□□□□ -0.43
SCYL3-204ENST00000423670 STK26Q9P289 416 aa12.39□□□□□ -0.43
SCYL3-204ENST00000423670 SMG6Q86US8 1419 aaKnown RBP12.39□□□□□ -0.43
SCYL3-204ENST00000423670 ALKQ9UM73 1620 aa12.39□□□□□ -0.43
SCYL3-204ENST00000423670 SAFB2Q14151 953 aaKnown RBP eCLIP12.38□□□□□ -0.43
SCYL3-204ENST00000423670 STAG3Q9UJ98 1225 aa12.38□□□□□ -0.43
SCYL3-204ENST00000423670 PTPRMP28827 1452 aa12.38□□□□□ -0.43
SCYL3-204ENST00000423670 YTHDC2Q9H6S0 1430 aaKnown RBP12.37□□□□□ -0.43
SCYL3-204ENST00000423670 BLMP54132 1417 aaPredicted RBP12.36□□□□□ -0.43
SCYL3-204ENST00000423670 RIMS2Q9UQ26 1411 aa12.36□□□□□ -0.43
SCYL3-204ENST00000423670 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
SCYL3-204ENST00000423670 ADAMTS8Q9UP79 889 aa12.36□□□□□ -0.43
SCYL3-204ENST00000423670 NUDCQ9Y266 331 aa12.36□□□□□ -0.43
SCYL3-204ENST00000423670 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
SCYL3-204ENST00000423670 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
SCYL3-204ENST00000423670 INSRP06213 1382 aa12.35□□□□□ -0.43
SCYL3-204ENST00000423670 EVC2Q86UK5 1308 aa12.35□□□□□ -0.43
SCYL3-204ENST00000423670 PRAM1Q96QH2 718 aa12.34□□□□□ -0.43
SCYL3-204ENST00000423670 SALL2Q9Y467 1007 aaPredicted RBP12.34□□□□□ -0.43
SCYL3-204ENST00000423670 NRXN3Q9Y4C0 1643 aa12.34□□□□□ -0.43
SCYL3-204ENST00000423670 PUS7Q96PZ0 661 aaKnown RBP12.34□□□□□ -0.43
SCYL3-204ENST00000423670 ESF1Q9H501 851 aaKnown RBP12.33□□□□□ -0.44
SCYL3-204ENST00000423670 TNRQ92752 1358 aa12.32□□□□□ -0.44
SCYL3-204ENST00000423670 MINK1Q8N4C8 1332 aaPredicted RBP12.32□□□□□ -0.44
SCYL3-204ENST00000423670 RNF123Q5XPI4 1314 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms