RNA–Protein interactions for RNA: ENST00000422622.3

SSPN-202, Transcript of sarcospan, humanhuman

TSL 2 BASIC

Gene SSPN, Length 4,348 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-202ENST00000422622 TXNDC2Q86VQ3 553 aa13.26□□□□□ -0.29
SSPN-202ENST00000422622 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
SSPN-202ENST00000422622 B4GALNT3Q6L9W6 998 aa13.26□□□□□ -0.29
SSPN-202ENST00000422622 RTEL1-TNFRSF6BF6WH68 1400 aa13.26□□□□□ -0.29
SSPN-202ENST00000422622 WAPLQ7Z5K2 1190 aa13.25□□□□□ -0.29
SSPN-202ENST00000422622 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
SSPN-202ENST00000422622 TSPOAP1O95153 1857 aa13.25□□□□□ -0.29
SSPN-202ENST00000422622 RRP7AQ9Y3A4 280 aaKnown RBP13.25□□□□□ -0.29
SSPN-202ENST00000422622 POGZQ7Z3K3 1410 aa13.24□□□□□ -0.29
SSPN-202ENST00000422622 TESK2Q96S53 571 aa13.24□□□□□ -0.29
SSPN-202ENST00000422622 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
SSPN-202ENST00000422622 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
SSPN-202ENST00000422622 GGNBP2Q9H3C7 697 aa13.23□□□□□ -0.29
SSPN-202ENST00000422622 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
SSPN-202ENST00000422622 EVC2Q86UK5 1308 aa13.21□□□□□ -0.3
SSPN-202ENST00000422622 RALGAPBQ86X10 1494 aa13.21□□□□□ -0.3
SSPN-202ENST00000422622 TSHZ2Q9NRE2 1034 aa13.21□□□□□ -0.3
SSPN-202ENST00000422622 U2AF1L5P0DN76 240 aaPredicted RBP13.2□□□□□ -0.3
SSPN-202ENST00000422622 HDGFP51858 240 aaKnown RBP13.2□□□□□ -0.3
SSPN-202ENST00000422622 U2AF1Q01081 240 aaKnown RBP eCLIP13.2□□□□□ -0.3
SSPN-202ENST00000422622 EID1Q9Y6B2 187 aa13.2□□□□□ -0.3
SSPN-202ENST00000422622 ZFYVE16Q7Z3T8 1539 aa13.2□□□□□ -0.3
SSPN-202ENST00000422622 NEFMP07197 916 aa13.2□□□□□ -0.3
SSPN-202ENST00000422622 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
SSPN-202ENST00000422622 CDCA7LQ96GN5 454 aa13.19□□□□□ -0.3
SSPN-202ENST00000422622 MAST1Q9Y2H9 1570 aa13.19□□□□□ -0.3
SSPN-202ENST00000422622 ATP10AO60312 1499 aa13.19□□□□□ -0.3
SSPN-202ENST00000422622 PNISRQ8TF01 805 aaKnown RBP13.19□□□□□ -0.3
SSPN-202ENST00000422622 CFAP53Q96M91 514 aa13.19□□□□□ -0.3
SSPN-202ENST00000422622 NPATQ14207 1427 aa13.19□□□□□ -0.3
SSPN-202ENST00000422622 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
SSPN-202ENST00000422622 LAS1LQ9Y4W2 734 aaKnown RBP13.18□□□□□ -0.3
SSPN-202ENST00000422622 HDGFL2Q7Z4V5 671 aaPredicted RBP13.18□□□□□ -0.3
SSPN-202ENST00000422622 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
SSPN-202ENST00000422622 PLIN1O60240 522 aa13.17□□□□□ -0.3
SSPN-202ENST00000422622 PPP2R1AP30153 589 aa13.17□□□□□ -0.3
SSPN-202ENST00000422622 APAF1O14727 1248 aa13.17□□□□□ -0.3
SSPN-202ENST00000422622 PAK3O75914 559 aaPredicted RBP13.17□□□□□ -0.3
SSPN-202ENST00000422622 FBLN1P23142 703 aa13.16□□□□□ -0.3
SSPN-202ENST00000422622 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
SSPN-202ENST00000422622 C14orf93Q9H972 538 aaKnown RBP13.16□□□□□ -0.3
SSPN-202ENST00000422622 CABP1Q9NZU7 370 aa13.16□□□□□ -0.3
SSPN-202ENST00000422622 CDK19Q9BWU1 502 aa13.15□□□□□ -0.31
SSPN-202ENST00000422622 TERF2IPQ9NYB0 399 aa13.15□□□□□ -0.31
SSPN-202ENST00000422622 ZBED9Q6R2W3 1325 aa13.14□□□□□ -0.31
SSPN-202ENST00000422622 FRAT1Q92837 279 aaPredicted RBP13.13□□□□□ -0.31
SSPN-202ENST00000422622 UHRF1BP1Q6BDS2 1440 aa13.13□□□□□ -0.31
SSPN-202ENST00000422622 MTHFSP49914 203 aa13.13□□□□□ -0.31
SSPN-202ENST00000422622 NUTM2GQ5VZR2 741 aa13.13□□□□□ -0.31
SSPN-202ENST00000422622 NUDCQ9Y266 331 aa13.13□□□□□ -0.31
SSPN-202ENST00000422622 PMFBP1Q8TBY8 1022 aa13.12□□□□□ -0.31
SSPN-202ENST00000422622 CGNL1Q0VF96 1302 aa13.12□□□□□ -0.31
SSPN-202ENST00000422622 SCAF11Q99590 1463 aaKnown RBP13.12□□□□□ -0.31
SSPN-202ENST00000422622 ABCA9Q8IUA7 1624 aa13.11□□□□□ -0.31
SSPN-202ENST00000422622 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
SSPN-202ENST00000422622 NCKAP5LQ9HCH0 1330 aa13.11□□□□□ -0.31
SSPN-202ENST00000422622 NEO1Q92859 1461 aa13.11□□□□□ -0.31
SSPN-202ENST00000422622 RIMBP3CA6NJZ7 1639 aa13.11□□□□□ -0.31
SSPN-202ENST00000422622 RIMBP3BA6NNM3 1639 aa13.11□□□□□ -0.31
SSPN-202ENST00000422622 RIMBP3Q9UFD9 1639 aa13.11□□□□□ -0.31
SSPN-202ENST00000422622 RPGRIP1LQ68CZ1 1315 aa13.11□□□□□ -0.31
SSPN-202ENST00000422622 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
SSPN-202ENST00000422622 RCAN3Q9UKA8 241 aa13.11□□□□□ -0.31
SSPN-202ENST00000422622 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
SSPN-202ENST00000422622 PER1O15534 1290 aaPredicted RBP13.1□□□□□ -0.31
SSPN-202ENST00000422622 MAPK8IP3Q9UPT6 1336 aa13.1□□□□□ -0.31
SSPN-202ENST00000422622 CARD14Q9BXL6 1004 aa13.09□□□□□ -0.31
SSPN-202ENST00000422622 BCL2L13Q9BXK5 485 aa13.09□□□□□ -0.31
SSPN-202ENST00000422622 ZMYM3Q14202 1370 aa13.09□□□□□ -0.31
SSPN-202ENST00000422622 PLXNC1O60486 1568 aa13.08□□□□□ -0.31
SSPN-202ENST00000422622 MLH3Q9UHC1 1453 aa13.08□□□□□ -0.32
SSPN-202ENST00000422622 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.32
SSPN-202ENST00000422622 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
SSPN-202ENST00000422622 NSD3Q9BZ95 1437 aa13.08□□□□□ -0.32
SSPN-202ENST00000422622 LTV1Q96GA3 475 aaPredicted RBP13.07□□□□□ -0.32
SSPN-202ENST00000422622 KDM5DQ9BY66 1539 aa13.07□□□□□ -0.32
SSPN-202ENST00000422622 HSP90AA1P07900 732 aaKnown RBP13.07□□□□□ -0.32
SSPN-202ENST00000422622 HMOX1P09601 288 aa13.07□□□□□ -0.32
SSPN-202ENST00000422622 AMER1Q5JTC6 1135 aaPredicted RBP13.06□□□□□ -0.32
SSPN-202ENST00000422622 PPP4R2Q9NY27 417 aa13.05□□□□□ -0.32
SSPN-202ENST00000422622 GOLGA2Q08379 1002 aa13.05□□□□□ -0.32
SSPN-202ENST00000422622 HECW2Q9P2P5 1572 aa13.05□□□□□ -0.32
SSPN-202ENST00000422622 IQGAP3Q86VI3 1631 aa13.04□□□□□ -0.32
SSPN-202ENST00000422622 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
SSPN-202ENST00000422622 PTPRTO14522 1441 aa13.03□□□□□ -0.32
SSPN-202ENST00000422622 ARAP3Q8WWN8 1544 aa13.03□□□□□ -0.32
SSPN-202ENST00000422622 UNC13BO14795 1591 aa13.03□□□□□ -0.32
SSPN-202ENST00000422622 RRS1Q15050 365 aaKnown RBP13.03□□□□□ -0.32
SSPN-202ENST00000422622 BCORL1Q5H9F3 1711 aa13.03□□□□□ -0.32
SSPN-202ENST00000422622 KDM5CP41229 1560 aa13.03□□□□□ -0.32
SSPN-202ENST00000422622 TNRQ92752 1358 aa13.03□□□□□ -0.32
SSPN-202ENST00000422622 CLTCL1P53675 1640 aa13.02□□□□□ -0.32
SSPN-202ENST00000422622 ELL2O00472 640 aaPredicted RBP13.02□□□□□ -0.32
SSPN-202ENST00000422622 GPRASP1Q5JY77 1395 aa13.02□□□□□ -0.32
SSPN-202ENST00000422622 THEMISQ8N1K5 641 aaPredicted RBP13.02□□□□□ -0.32
SSPN-202ENST00000422622 EXOC6Q8TAG9 804 aa13.02□□□□□ -0.32
SSPN-202ENST00000422622 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.32
SSPN-202ENST00000422622 E9PCH4 1651 aa13.02□□□□□ -0.33
SSPN-202ENST00000422622 XPCQ01831 940 aaPredicted RBP13.02□□□□□ -0.33
SSPN-202ENST00000422622 KIDINS220Q9ULH0 1771 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms