RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 ADGRB3O60242 1522 aa17.37■□□□□ 0.37
NDUFA3-208ENST00000422029 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
NDUFA3-208ENST00000422029 NUP155O75694 1391 aa17.35■□□□□ 0.37
NDUFA3-208ENST00000422029 TET3O43151 1660 aa17.34■□□□□ 0.37
NDUFA3-208ENST00000422029 RIMS2Q9UQ26 1411 aa17.34■□□□□ 0.37
NDUFA3-208ENST00000422029 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
NDUFA3-208ENST00000422029 E9PCH4 1651 aa17.32■□□□□ 0.36
NDUFA3-208ENST00000422029 UNC13BO14795 1591 aa17.32■□□□□ 0.36
NDUFA3-208ENST00000422029 RPRD2Q5VT52 1461 aaKnown RBP17.31■□□□□ 0.36
NDUFA3-208ENST00000422029 ROCK1Q13464 1354 aa17.3■□□□□ 0.36
NDUFA3-208ENST00000422029 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
NDUFA3-208ENST00000422029 KDM5AP29375 1690 aaKnown RBP17.29■□□□□ 0.36
NDUFA3-208ENST00000422029 TMEM131LA2VDJ0 1609 aa17.29■□□□□ 0.36
NDUFA3-208ENST00000422029 C14orf37Q86TY3 774 aa17.28■□□□□ 0.36
NDUFA3-208ENST00000422029 HDGFP51858 240 aaKnown RBP17.27■□□□□ 0.36
NDUFA3-208ENST00000422029 PLEKHG1Q9ULL1 1385 aa17.27■□□□□ 0.35
NDUFA3-208ENST00000422029 IQGAP3Q86VI3 1631 aa17.25■□□□□ 0.35
NDUFA3-208ENST00000422029 ZNF326Q5BKZ1 582 aaKnown RBP17.25■□□□□ 0.35
NDUFA3-208ENST00000422029 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
NDUFA3-208ENST00000422029 SLAIN2Q9P270 581 aa17.24■□□□□ 0.35
NDUFA3-208ENST00000422029 RGS17Q9UGC6 210 aaPredicted RBP17.23■□□□□ 0.35
NDUFA3-208ENST00000422029 TBX22Q9Y458 520 aa17.23■□□□□ 0.35
NDUFA3-208ENST00000422029 MSH6P52701 1360 aa17.23■□□□□ 0.35
NDUFA3-208ENST00000422029 FAM135BQ49AJ0 1406 aa17.22■□□□□ 0.35
NDUFA3-208ENST00000422029 ROBO1Q9Y6N7 1651 aa17.22■□□□□ 0.35
NDUFA3-208ENST00000422029 ADAMTS13Q76LX8 1427 aa17.21■□□□□ 0.35
NDUFA3-208ENST00000422029 TRIM52Q96A61 297 aa17.21■□□□□ 0.35
NDUFA3-208ENST00000422029 NWD1Q149M9 1564 aa17.2■□□□□ 0.34
NDUFA3-208ENST00000422029 CHD2O14647 1828 aaKnown RBP17.2■□□□□ 0.34
NDUFA3-208ENST00000422029 AMOTL2Q9Y2J4 779 aa17.2■□□□□ 0.34
NDUFA3-208ENST00000422029 NKTRP30414 1462 aaKnown RBP17.19■□□□□ 0.34
NDUFA3-208ENST00000422029 PTPRUQ92729 1446 aa17.17■□□□□ 0.34
NDUFA3-208ENST00000422029 FOXD1Q16676 465 aa17.15■□□□□ 0.34
NDUFA3-208ENST00000422029 POTEAQ6S8J7 498 aa17.15■□□□□ 0.34
NDUFA3-208ENST00000422029 NAIPQ13075 1403 aa17.14■□□□□ 0.33
NDUFA3-208ENST00000422029 ATF3P18847 181 aa17.14■□□□□ 0.33
NDUFA3-208ENST00000422029 RRBP1Q9P2E9 1410 aaKnown RBP17.13■□□□□ 0.33
NDUFA3-208ENST00000422029 SPHKAPQ2M3C7 1700 aa17.13■□□□□ 0.33
NDUFA3-208ENST00000422029 C19orf44Q9H6X5 657 aa17.13■□□□□ 0.33
NDUFA3-208ENST00000422029 METP08581 1390 aa17.13■□□□□ 0.33
NDUFA3-208ENST00000422029 PHLPP1O60346 1717 aa17.13■□□□□ 0.33
NDUFA3-208ENST00000422029 CLTCL1P53675 1640 aa17.11■□□□□ 0.33
NDUFA3-208ENST00000422029 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.1■□□□□ 0.33
NDUFA3-208ENST00000422029 SLC4A1APQ9BWU0 796 aaKnown RBP17.1■□□□□ 0.33
NDUFA3-208ENST00000422029 TRPM2O94759 1503 aa17.1■□□□□ 0.33
NDUFA3-208ENST00000422029 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
NDUFA3-208ENST00000422029 DDX17Q92841 729 aaKnown RBP17.09■□□□□ 0.33
NDUFA3-208ENST00000422029 NRXN3Q9Y4C0 1643 aa17.08■□□□□ 0.32
NDUFA3-208ENST00000422029 NUTM2BA6NNL0 878 aaPredicted RBP17.08■□□□□ 0.32
NDUFA3-208ENST00000422029 NUTM2EB1AL46 878 aaPredicted RBP17.08■□□□□ 0.32
NDUFA3-208ENST00000422029 NUTM2AQ8IVF1 878 aaPredicted RBP17.08■□□□□ 0.32
NDUFA3-208ENST00000422029 PIK3R4Q99570 1358 aa17.07■□□□□ 0.32
NDUFA3-208ENST00000422029 BRINP3Q76B58 766 aa17.07■□□□□ 0.32
NDUFA3-208ENST00000422029 DIP2AQ14689 1571 aa17.06■□□□□ 0.32
NDUFA3-208ENST00000422029 JCADQ9P266 1359 aa17.06■□□□□ 0.32
NDUFA3-208ENST00000422029 MEX3CQ5U5Q3 659 aaKnown RBP17.05■□□□□ 0.32
NDUFA3-208ENST00000422029 NEXMIFQ5QGS0 1516 aa17.04■□□□□ 0.32
NDUFA3-208ENST00000422029 COL16A1Q07092 1604 aaPredicted RBP17.03■□□□□ 0.32
NDUFA3-208ENST00000422029 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
NDUFA3-208ENST00000422029 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
NDUFA3-208ENST00000422029 RGL3Q3MIN7 710 aa17.02■□□□□ 0.32
NDUFA3-208ENST00000422029 HFM1A2PYH4 1435 aa17.02■□□□□ 0.31
NDUFA3-208ENST00000422029 KIF1BO60333 1816 aa17.01■□□□□ 0.31
NDUFA3-208ENST00000422029 LRP6O75581 1613 aa17.01■□□□□ 0.31
NDUFA3-208ENST00000422029 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
NDUFA3-208ENST00000422029 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
NDUFA3-208ENST00000422029 MST1RQ04912 1400 aa16.98■□□□□ 0.31
NDUFA3-208ENST00000422029 STK26Q9P289 416 aa16.97■□□□□ 0.31
NDUFA3-208ENST00000422029 ROBO2Q9HCK4 1378 aa16.97■□□□□ 0.31
NDUFA3-208ENST00000422029 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.31
NDUFA3-208ENST00000422029 ORAI2Q96SN7 254 aa16.96■□□□□ 0.31
NDUFA3-208ENST00000422029 MPHOSPH9Q99550 1183 aa16.96■□□□□ 0.31
NDUFA3-208ENST00000422029 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.3
NDUFA3-208ENST00000422029 AHDC1Q5TGY3 1603 aaPredicted RBP16.96■□□□□ 0.3
NDUFA3-208ENST00000422029 SPATA31A6Q5VVP1 1343 aa16.96■□□□□ 0.3
NDUFA3-208ENST00000422029 ADGRF5Q8IZF2 1346 aa16.96■□□□□ 0.3
NDUFA3-208ENST00000422029 NALCNQ8IZF0 1738 aa16.94■□□□□ 0.3
NDUFA3-208ENST00000422029 NUTM2FA1L443 756 aa16.94■□□□□ 0.3
NDUFA3-208ENST00000422029 ADGRL3Q9HAR2 1447 aa16.94■□□□□ 0.3
NDUFA3-208ENST00000422029 TMEM132EQ6IEE7 984 aa16.93■□□□□ 0.3
NDUFA3-208ENST00000422029 DCCP43146 1447 aa16.92■□□□□ 0.3
NDUFA3-208ENST00000422029 RPGRIP1LQ68CZ1 1315 aa16.92■□□□□ 0.3
NDUFA3-208ENST00000422029 ADAMTS2O95450 1211 aa16.91■□□□□ 0.3
NDUFA3-208ENST00000422029 WAPLQ7Z5K2 1190 aa16.91■□□□□ 0.3
NDUFA3-208ENST00000422029 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
NDUFA3-208ENST00000422029 XPCQ01831 940 aaPredicted RBP16.9■□□□□ 0.3
NDUFA3-208ENST00000422029 LRRC59Q96AG4 307 aaKnown RBP16.9■□□□□ 0.3
NDUFA3-208ENST00000422029 C1orf167Q5SNV9 1468 aa16.9■□□□□ 0.3
NDUFA3-208ENST00000422029 PPLO60437 1756 aa16.89■□□□□ 0.3
NDUFA3-208ENST00000422029 SHPRHQ149N8 1683 aa16.89■□□□□ 0.29
NDUFA3-208ENST00000422029 ZNF772Q68DY9 489 aaPredicted RBP16.89■□□□□ 0.29
NDUFA3-208ENST00000422029 AFF2P51816 1311 aa16.89■□□□□ 0.29
NDUFA3-208ENST00000422029 CCDC144AA2RUR9 1427 aa16.88■□□□□ 0.29
NDUFA3-208ENST00000422029 PNPLA6Q8IY17 1366 aa16.87■□□□□ 0.29
NDUFA3-208ENST00000422029 SETD5Q9C0A6 1442 aa16.87■□□□□ 0.29
NDUFA3-208ENST00000422029 NHSL1Q5SYE7 1610 aa16.86■□□□□ 0.29
NDUFA3-208ENST00000422029 RXRBP28702 533 aa16.86■□□□□ 0.29
NDUFA3-208ENST00000422029 ESCO1Q5FWF5 840 aa16.86■□□□□ 0.29
NDUFA3-208ENST00000422029 PLEKHG5O94827 1062 aa16.85■□□□□ 0.29
NDUFA3-208ENST00000422029 PLEKHH1Q9ULM0 1364 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms