RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 MYT1Q01538 1121 aa11.97□□□□□ -0.49
SFXN1-202ENST00000421887 SPRYD7Q5W111 196 aa11.97□□□□□ -0.49
SFXN1-202ENST00000421887 EMID1Q96A84 441 aaPredicted RBP11.97□□□□□ -0.49
SFXN1-202ENST00000421887 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.97□□□□□ -0.49
SFXN1-202ENST00000421887 DGAT1O75907 488 aa11.95□□□□□ -0.5
SFXN1-202ENST00000421887 ZNF598Q86UK7 904 aaKnown RBP11.95□□□□□ -0.5
SFXN1-202ENST00000421887 POTECB2RU33 542 aa11.94□□□□□ -0.5
SFXN1-202ENST00000421887 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
SFXN1-202ENST00000421887 FAM187AA6NFU0 413 aa11.92□□□□□ -0.5
SFXN1-202ENST00000421887 S1PR4O95977 384 aa11.92□□□□□ -0.5
SFXN1-202ENST00000421887 ZNF697Q5TEC3 545 aa11.92□□□□□ -0.5
SFXN1-202ENST00000421887 ANKLE1Q8NAG6 615 aa11.92□□□□□ -0.5
SFXN1-202ENST00000421887 TNFRSF10AO00220 468 aa11.91□□□□□ -0.5
SFXN1-202ENST00000421887 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
SFXN1-202ENST00000421887 DNAJB2P25686 324 aa11.9□□□□□ -0.5
SFXN1-202ENST00000421887 PRR20EP86478 221 aa11.9□□□□□ -0.5
SFXN1-202ENST00000421887 PRR20CP86479 221 aa11.9□□□□□ -0.5
SFXN1-202ENST00000421887 PRR20DP86480 221 aa11.9□□□□□ -0.5
SFXN1-202ENST00000421887 PRR20BP86481 221 aa11.9□□□□□ -0.5
SFXN1-202ENST00000421887 PRR20AP86496 221 aa11.9□□□□□ -0.5
SFXN1-202ENST00000421887 KMT5BQ4FZB7 885 aa11.89□□□□□ -0.51
SFXN1-202ENST00000421887 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
SFXN1-202ENST00000421887 RBM46Q8TBY0 533 aaKnown RBP11.87□□□□□ -0.51
SFXN1-202ENST00000421887 ACTN4O43707 911 aaKnown RBP11.85□□□□□ -0.51
SFXN1-202ENST00000421887 CFHP08603 1231 aa11.85□□□□□ -0.51
SFXN1-202ENST00000421887 TMEM134Q9H6X4 195 aa11.85□□□□□ -0.51
SFXN1-202ENST00000421887 GDF9O60383 454 aa11.84□□□□□ -0.51
SFXN1-202ENST00000421887 ST8SIA5O15466 376 aa11.83□□□□□ -0.52
SFXN1-202ENST00000421887 MLLT3P42568 568 aaPredicted RBP11.83□□□□□ -0.52
SFXN1-202ENST00000421887 RCCD1A6NED2 376 aa11.82□□□□□ -0.52
SFXN1-202ENST00000421887 ADH1BP00325 375 aa11.82□□□□□ -0.52
SFXN1-202ENST00000421887 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
SFXN1-202ENST00000421887 PTGDRQ13258 359 aa11.81□□□□□ -0.52
SFXN1-202ENST00000421887 SLC6A16Q9GZN6 736 aa11.81□□□□□ -0.52
SFXN1-202ENST00000421887 NR1I2O75469 434 aa11.8□□□□□ -0.52
SFXN1-202ENST00000421887 ADGRG1Q9Y653 693 aa11.8□□□□□ -0.52
SFXN1-202ENST00000421887 FOXC1Q12948 553 aa11.79□□□□□ -0.52
SFXN1-202ENST00000421887 PLA2G2CQ5R387 149 aa11.79□□□□□ -0.52
SFXN1-202ENST00000421887 AAASQ9NRG9 546 aa11.79□□□□□ -0.52
SFXN1-202ENST00000421887 SLC10A3P09131 477 aa11.77□□□□□ -0.53
SFXN1-202ENST00000421887 NUTM2FA1L443 756 aa11.76□□□□□ -0.53
SFXN1-202ENST00000421887 TREML4Q6UXN2 200 aa11.76□□□□□ -0.53
SFXN1-202ENST00000421887 SCUBE3Q8IX30 993 aa11.75□□□□□ -0.53
SFXN1-202ENST00000421887 PUS10Q3MIT2 529 aaKnown RBP11.74□□□□□ -0.53
SFXN1-202ENST00000421887 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
SFXN1-202ENST00000421887 PKD2L1Q9P0L9 805 aa11.72□□□□□ -0.53
SFXN1-202ENST00000421887 SPSB2Q99619 263 aa11.71□□□□□ -0.53
SFXN1-202ENST00000421887 DACH1Q9UI36 760 aa11.7□□□□□ -0.54
SFXN1-202ENST00000421887 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
SFXN1-202ENST00000421887 LCE2AQ5TA79 106 aaPredicted RBP11.68□□□□□ -0.54
SFXN1-202ENST00000421887 RSPH4AQ5TD94 716 aa11.68□□□□□ -0.54
SFXN1-202ENST00000421887 LMOD2Q6P5Q4 547 aa11.67□□□□□ -0.54
SFXN1-202ENST00000421887 ABCC9O60706 1549 aa11.65□□□□□ -0.54
SFXN1-202ENST00000421887 C11orf95C9JLR9 678 aaPredicted RBP11.65□□□□□ -0.54
SFXN1-202ENST00000421887 CYP4X1Q8N118 509 aa11.65□□□□□ -0.54
SFXN1-202ENST00000421887 KCNV2Q8TDN2 545 aa11.65□□□□□ -0.54
SFXN1-202ENST00000421887 GMPR2Q9P2T1 348 aaKnown RBP11.65□□□□□ -0.54
SFXN1-202ENST00000421887 AXIN1O15169 862 aa11.64□□□□□ -0.55
SFXN1-202ENST00000421887 WFS1O76024 890 aa11.64□□□□□ -0.55
SFXN1-202ENST00000421887 FCHSD2O94868 740 aa11.64□□□□□ -0.55
SFXN1-202ENST00000421887 CD2BP2O95400 341 aaKnown RBP11.64□□□□□ -0.55
SFXN1-202ENST00000421887 PXYLP1Q8TE99 480 aa11.64□□□□□ -0.55
SFXN1-202ENST00000421887 FCF1Q9Y324 198 aaKnown RBP11.64□□□□□ -0.55
SFXN1-202ENST00000421887 OATP04181 439 aa11.63□□□□□ -0.55
SFXN1-202ENST00000421887 RPIAP49247 311 aa11.63□□□□□ -0.55
SFXN1-202ENST00000421887 CRIPAKQ8N1N5 446 aa11.63□□□□□ -0.55
SFXN1-202ENST00000421887 TOR4AQ9NXH8 423 aa11.62□□□□□ -0.55
SFXN1-202ENST00000421887 AVPP01185 164 aa11.6□□□□□ -0.55
SFXN1-202ENST00000421887 RDH13Q8NBN7 331 aa11.59□□□□□ -0.55
SFXN1-202ENST00000421887 TTC24A2A3L6 582 aaPredicted RBP11.57□□□□□ -0.56
SFXN1-202ENST00000421887 CTC1Q2NKJ3 1217 aa11.57□□□□□ -0.56
SFXN1-202ENST00000421887 FUT2Q10981 343 aa11.56□□□□□ -0.56
SFXN1-202ENST00000421887 MORN1Q5T089 497 aa11.56□□□□□ -0.56
SFXN1-202ENST00000421887 METTL3Q86U44 580 aaKnown RBP11.56□□□□□ -0.56
SFXN1-202ENST00000421887 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
SFXN1-202ENST00000421887 FMNL1O95466 1100 aaPredicted RBP11.55□□□□□ -0.56
SFXN1-202ENST00000421887 DDX11L8A8MPP1 907 aa11.54□□□□□ -0.56
SFXN1-202ENST00000421887 FAM160A2Q8N612 972 aaPredicted RBP11.54□□□□□ -0.56
SFXN1-202ENST00000421887 PRDM9Q9NQV7 894 aa11.54□□□□□ -0.56
SFXN1-202ENST00000421887 TSHZ2Q9NRE2 1034 aa11.54□□□□□ -0.56
SFXN1-202ENST00000421887 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
SFXN1-202ENST00000421887 NFX1Q12986 1120 aaKnown RBP11.53□□□□□ -0.56
SFXN1-202ENST00000421887 THAP11Q96EK4 314 aa11.53□□□□□ -0.56
SFXN1-202ENST00000421887 SLC27A5Q9Y2P5 690 aa11.53□□□□□ -0.56
SFXN1-202ENST00000421887 SEMA3EO15041 775 aa11.52□□□□□ -0.57
SFXN1-202ENST00000421887 SMCPP49901 116 aaPredicted RBP11.52□□□□□ -0.57
SFXN1-202ENST00000421887 STK17AQ9UEE5 414 aa11.51□□□□□ -0.57
SFXN1-202ENST00000421887 DAXXQ9UER7 740 aaPredicted RBP11.51□□□□□ -0.57
SFXN1-202ENST00000421887 HIC1Q14526 733 aa11.5□□□□□ -0.57
SFXN1-202ENST00000421887 INSM1Q01101 510 aaPredicted RBP11.49□□□□□ -0.57
SFXN1-202ENST00000421887 NLRP7Q8WX94 980 aa11.49□□□□□ -0.57
SFXN1-202ENST00000421887 FECHP22830 423 aa11.47□□□□□ -0.57
SFXN1-202ENST00000421887 AMER1Q5JTC6 1135 aaPredicted RBP11.47□□□□□ -0.57
SFXN1-202ENST00000421887 WIPF1O43516 503 aa11.46□□□□□ -0.57
SFXN1-202ENST00000421887 SNRPBP14678 240 aaKnown RBP11.46□□□□□ -0.57
SFXN1-202ENST00000421887 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
SFXN1-202ENST00000421887 SMPD1P17405 629 aa11.45□□□□□ -0.58
SFXN1-202ENST00000421887 GCGRP47871 477 aa11.45□□□□□ -0.58
SFXN1-202ENST00000421887 BRICD5Q6PL45 260 aa11.45□□□□□ -0.58
SFXN1-202ENST00000421887 SNIP1Q8TAD8 396 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 197.5 ms