RNA–Protein interactions for RNA: ENST00000421832.2

CTU1-201, Transcript of cytosolic thiouridylase subunit 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTU1, Length 2,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU1-201ENST00000421832 RALGAPBQ86X10 1494 aa34.42■■■■□ 3.1
CTU1-201ENST00000421832 HIRIP3Q9BW71 556 aaPredicted RBP34.39■■■■□ 3.1
CTU1-201ENST00000421832 MYOM2P54296 1465 aa34.38■■■■□ 3.09
CTU1-201ENST00000421832 NEXMIFQ5QGS0 1516 aa34.37■■■■□ 3.09
CTU1-201ENST00000421832 ADGRF5Q8IZF2 1346 aa34.37■■■■□ 3.09
CTU1-201ENST00000421832 A2ML1A8K2U0 1454 aa34.34■■■■□ 3.09
CTU1-201ENST00000421832 NUTM2DQ5VT03 806 aaPredicted RBP34.33■■■■□ 3.09
CTU1-201ENST00000421832 NBPF1Q3BBV0 1214 aa34.32■■■■□ 3.09
CTU1-201ENST00000421832 STAC3Q96MF2 364 aa34.32■■■■□ 3.09
CTU1-201ENST00000421832 STAG3Q9UJ98 1225 aa34.32■■■■□ 3.09
CTU1-201ENST00000421832 RPGRIP1LQ68CZ1 1315 aa34.32■■■■□ 3.09
CTU1-201ENST00000421832 NRXN1Q9ULB1 1477 aa34.31■■■■□ 3.08
CTU1-201ENST00000421832 ROCK2O75116 1388 aaKnown RBP34.29■■■■□ 3.08
CTU1-201ENST00000421832 UBR1Q8IWV7 1749 aa34.28■■■■□ 3.08
CTU1-201ENST00000421832 HSPA5P11021 654 aaKnown RBP34.27■■■■□ 3.08
CTU1-201ENST00000421832 CARD11Q9BXL7 1154 aa34.26■■■■□ 3.07
CTU1-201ENST00000421832 NLRP1Q9C000 1473 aa34.25■■■■□ 3.07
CTU1-201ENST00000421832 EIF4G2P78344 907 aaKnown RBP eCLIP34.24■■■■□ 3.07
CTU1-201ENST00000421832 MYO3AQ8NEV4 1616 aa34.23■■■■□ 3.07
CTU1-201ENST00000421832 KDM5AP29375 1690 aaKnown RBP34.23■■■■□ 3.07
CTU1-201ENST00000421832 PIK3C2GO75747 1445 aa34.22■■■■□ 3.07
CTU1-201ENST00000421832 GPRASP1Q5JY77 1395 aa34.22■■■■□ 3.07
CTU1-201ENST00000421832 KIAA1210Q9ULL0 1709 aa34.21■■■■□ 3.07
CTU1-201ENST00000421832 USP47Q96K76 1375 aa34.21■■■■□ 3.07
CTU1-201ENST00000421832 CFAP70Q5T0N1 1121 aa34.21■■■■□ 3.07
CTU1-201ENST00000421832 VGFO15240 615 aaPredicted RBP34.19■■■■□ 3.06
CTU1-201ENST00000421832 PTPRMP28827 1452 aa34.18■■■■□ 3.06
CTU1-201ENST00000421832 LAMC1P11047 1609 aa34.18■■■■□ 3.06
CTU1-201ENST00000421832 SENP3Q9H4L4 574 aaPredicted RBP34.18■■■■□ 3.06
CTU1-201ENST00000421832 ZFYVE9O95405 1425 aa34.17■■■■□ 3.06
CTU1-201ENST00000421832 RIMS2Q9UQ26 1411 aa34.17■■■■□ 3.06
CTU1-201ENST00000421832 C14orf93Q9H972 538 aaKnown RBP34.1■■■■□ 3.05
CTU1-201ENST00000421832 TMEM2Q9UHN6 1383 aa34.1■■■■□ 3.05
CTU1-201ENST00000421832 CEP170BQ9Y4F5 1589 aaPredicted RBP34.09■■■■□ 3.05
CTU1-201ENST00000421832 SETD1BQ9UPS6 1966 aaKnown RBP34.09■■■■□ 3.05
CTU1-201ENST00000421832 IQGAP1P46940 1657 aa34.09■■■■□ 3.05
CTU1-201ENST00000421832 ST20-MTHFSA0A0A6YYL1 179 aa34.05■■■■□ 3.04
CTU1-201ENST00000421832 ADGRB1O14514 1584 aa34.04■■■■□ 3.04
CTU1-201ENST00000421832 ANP32EQ9BTT0 268 aa34.04■■■■□ 3.04
CTU1-201ENST00000421832 SETBP1Q9Y6X0 1596 aa34.04■■■■□ 3.04
CTU1-201ENST00000421832 SUPT16HQ9Y5B9 1047 aaKnown RBP34.03■■■■□ 3.04
CTU1-201ENST00000421832 ZNF142P52746 1687 aaPredicted RBP34.03■■■■□ 3.04
CTU1-201ENST00000421832 KDM4FA0A1W2PPD8 638 aa34.02■■■■□ 3.04
CTU1-201ENST00000421832 TMEM132EQ6IEE7 984 aa34.02■■■■□ 3.04
CTU1-201ENST00000421832 C11orf95C9JLR9 678 aaPredicted RBP34.02■■■■□ 3.04
CTU1-201ENST00000421832 NRXN3Q9Y4C0 1643 aa34■■■■□ 3.03
CTU1-201ENST00000421832 SLIT1O75093 1534 aa34■■■■□ 3.03
CTU1-201ENST00000421832 SCAF11Q99590 1463 aaKnown RBP34■■■■□ 3.03
CTU1-201ENST00000421832 LTKP29376 864 aa34■■■■□ 3.03
CTU1-201ENST00000421832 ABCF1Q8NE71 845 aaKnown RBP eCLIP34■■■■□ 3.03
CTU1-201ENST00000421832 ASXL1Q8IXJ9 1541 aa33.99■■■■□ 3.03
CTU1-201ENST00000421832 ARHGAP23Q9P227 1491 aa33.99■■■■□ 3.03
CTU1-201ENST00000421832 ALKQ9UM73 1620 aa33.99■■■■□ 3.03
CTU1-201ENST00000421832 THEMISQ8N1K5 641 aaPredicted RBP33.97■■■■□ 3.03
CTU1-201ENST00000421832 SETD1AO15047 1707 aaKnown RBP33.96■■■■□ 3.03
CTU1-201ENST00000421832 WASHC2AQ641Q2 1341 aa33.94■■■■□ 3.02
CTU1-201ENST00000421832 HDGFP51858 240 aaKnown RBP33.94■■■■□ 3.02
CTU1-201ENST00000421832 TXNDC2Q86VQ3 553 aa33.93■■■■□ 3.02
CTU1-201ENST00000421832 POLR1AO95602 1720 aaPredicted RBP33.93■■■■□ 3.02
CTU1-201ENST00000421832 TESK2Q96S53 571 aa33.89■■■■□ 3.02
CTU1-201ENST00000421832 TRAK1Q9UPV9 953 aa33.88■■■■□ 3.01
CTU1-201ENST00000421832 DDX10Q13206 875 aaKnown RBP33.87■■■■□ 3.01
CTU1-201ENST00000421832 TSHZ2Q9NRE2 1034 aa33.87■■■■□ 3.01
CTU1-201ENST00000421832 EID1Q9Y6B2 187 aa33.87■■■■□ 3.01
CTU1-201ENST00000421832 CCDC7Q96M83 1385 aa33.87■■■■□ 3.01
CTU1-201ENST00000421832 KIF7Q2M1P5 1343 aa33.86■■■■□ 3.01
CTU1-201ENST00000421832 PLEKHG1Q9ULL1 1385 aa33.86■■■■□ 3.01
CTU1-201ENST00000421832 ARHGEF28Q8N1W1 1705 aaKnown RBP33.84■■■■□ 3.01
CTU1-201ENST00000421832 ADAMTS13Q76LX8 1427 aa33.83■■■■□ 3.01
CTU1-201ENST00000421832 EIF3AQ14152 1382 aaKnown RBP33.83■■■■□ 3.01
CTU1-201ENST00000421832 BCANQ96GW7 911 aa33.83■■■■□ 3.01
CTU1-201ENST00000421832 STK26Q9P289 416 aa33.81■■■■□ 3
CTU1-201ENST00000421832 YTHDC2Q9H6S0 1430 aaKnown RBP33.81■■■■□ 3
CTU1-201ENST00000421832 METP08581 1390 aa33.8■■■■□ 3
CTU1-201ENST00000421832 DISP3Q9P2K9 1392 aa33.78■■■■□ 3
CTU1-201ENST00000421832 MED14O60244 1454 aa33.75■■■□□ 2.99
CTU1-201ENST00000421832 SLC26A8Q96RN1 970 aa33.75■■■□□ 2.99
CTU1-201ENST00000421832 POLR3GLQ9BT43 218 aa33.75■■■□□ 2.99
CTU1-201ENST00000421832 QRICH2Q9H0J4 1663 aa33.75■■■□□ 2.99
CTU1-201ENST00000421832 BCL11AQ9H165 835 aa33.74■■■□□ 2.99
CTU1-201ENST00000421832 CENPJQ9HC77 1338 aaPredicted RBP33.73■■■□□ 2.99
CTU1-201ENST00000421832 ANKLE2Q86XL3 938 aa33.72■■■□□ 2.99
CTU1-201ENST00000421832 LRPPRCP42704 1394 aaKnown RBP33.7■■■□□ 2.99
CTU1-201ENST00000421832 TMF1P82094 1093 aa33.68■■■□□ 2.98
CTU1-201ENST00000421832 SAFB2Q14151 953 aaKnown RBP eCLIP33.66■■■□□ 2.98
CTU1-201ENST00000421832 ABCC11Q96J66 1382 aa33.64■■■□□ 2.98
CTU1-201ENST00000421832 SBNO2Q9Y2G9 1366 aa33.64■■■□□ 2.98
CTU1-201ENST00000421832 PRAM1Q96QH2 718 aa33.64■■■□□ 2.98
CTU1-201ENST00000421832 KNDC1Q76NI1 1749 aa33.63■■■□□ 2.97
CTU1-201ENST00000421832 DIP2AQ14689 1571 aa33.63■■■□□ 2.97
CTU1-201ENST00000421832 PTPRUQ92729 1446 aa33.63■■■□□ 2.97
CTU1-201ENST00000421832 TBX22Q9Y458 520 aa33.63■■■□□ 2.97
CTU1-201ENST00000421832 DLC1Q96QB1 1528 aa33.63■■■□□ 2.97
CTU1-201ENST00000421832 NCKAP5LQ9HCH0 1330 aa33.61■■■□□ 2.97
CTU1-201ENST00000421832 PLEKHH1Q9ULM0 1364 aa33.6■■■□□ 2.97
CTU1-201ENST00000421832 HSPA2P54652 639 aa33.6■■■□□ 2.97
CTU1-201ENST00000421832 LMTK3Q96Q04 1460 aa33.59■■■□□ 2.97
CTU1-201ENST00000421832 WAPLQ7Z5K2 1190 aa33.59■■■□□ 2.97
CTU1-201ENST00000421832 TECPR2O15040 1411 aa33.58■■■□□ 2.97
CTU1-201ENST00000421832 POGKQ9P215 609 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms