RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ARHGEF5Q12774 1597 aa17.53■□□□□ 0.4
MCF2L-213ENST00000421756 CDCA8Q53HL2 280 aa17.53■□□□□ 0.4
MCF2L-213ENST00000421756 GOLGA2Q08379 1002 aa17.53■□□□□ 0.4
MCF2L-213ENST00000421756 CABP2Q9NPB3 220 aa17.52■□□□□ 0.4
MCF2L-213ENST00000421756 STAG3Q9UJ98 1225 aa17.52■□□□□ 0.4
MCF2L-213ENST00000421756 OSCARQ8IYS5 282 aa17.51■□□□□ 0.39
MCF2L-213ENST00000421756 CLUAP1Q96AJ1 413 aa17.51■□□□□ 0.39
MCF2L-213ENST00000421756 PLEKHH1Q9ULM0 1364 aa17.51■□□□□ 0.39
MCF2L-213ENST00000421756 ADGRL1O94910 1474 aa17.51■□□□□ 0.39
MCF2L-213ENST00000421756 MAGI2Q86UL8 1455 aa17.51■□□□□ 0.39
MCF2L-213ENST00000421756 DUOX2Q9NRD8 1548 aa17.5■□□□□ 0.39
MCF2L-213ENST00000421756 PDE4AP27815 886 aa17.5■□□□□ 0.39
MCF2L-213ENST00000421756 U2SURPO15042 1029 aaKnown RBP17.49■□□□□ 0.39
MCF2L-213ENST00000421756 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
MCF2L-213ENST00000421756 COL17A1Q9UMD9 1497 aaPredicted RBP17.49■□□□□ 0.39
MCF2L-213ENST00000421756 FBLN1P23142 703 aa17.48■□□□□ 0.39
MCF2L-213ENST00000421756 PDE3BQ13370 1112 aa17.46■□□□□ 0.39
MCF2L-213ENST00000421756 MINK1Q8N4C8 1332 aaPredicted RBP17.46■□□□□ 0.39
MCF2L-213ENST00000421756 ASXL2Q76L83 1435 aa17.46■□□□□ 0.39
MCF2L-213ENST00000421756 MYO5CQ9NQX4 1742 aa17.46■□□□□ 0.39
MCF2L-213ENST00000421756 ZCCHC11Q5TAX3 1644 aaKnown RBP17.46■□□□□ 0.39
MCF2L-213ENST00000421756 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.39
MCF2L-213ENST00000421756 CENPJQ9HC77 1338 aaPredicted RBP17.45■□□□□ 0.38
MCF2L-213ENST00000421756 GPRASP1Q5JY77 1395 aa17.45■□□□□ 0.38
MCF2L-213ENST00000421756 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
MCF2L-213ENST00000421756 ATP10AO60312 1499 aa17.45■□□□□ 0.38
MCF2L-213ENST00000421756 PANK1Q8TE04 598 aa17.44■□□□□ 0.38
MCF2L-213ENST00000421756 NOS1P29475 1434 aa17.44■□□□□ 0.38
MCF2L-213ENST00000421756 U2AF1L5P0DN76 240 aaPredicted RBP17.44■□□□□ 0.38
MCF2L-213ENST00000421756 U2AF1Q01081 240 aaKnown RBP eCLIP17.44■□□□□ 0.38
MCF2L-213ENST00000421756 GGNBP2Q9H3C7 697 aa17.44■□□□□ 0.38
MCF2L-213ENST00000421756 COG6Q9Y2V7 657 aa17.44■□□□□ 0.38
MCF2L-213ENST00000421756 MTHFSP49914 203 aa17.44■□□□□ 0.38
MCF2L-213ENST00000421756 IPO9Q96P70 1041 aaKnown RBP17.44■□□□□ 0.38
MCF2L-213ENST00000421756 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
MCF2L-213ENST00000421756 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
MCF2L-213ENST00000421756 TNNQ9UQP3 1299 aa17.42■□□□□ 0.38
MCF2L-213ENST00000421756 RTL5Q5HYW3 569 aaPredicted RBP17.41■□□□□ 0.38
MCF2L-213ENST00000421756 POGKQ9P215 609 aa17.41■□□□□ 0.38
MCF2L-213ENST00000421756 WDR7Q9Y4E6 1490 aa17.41■□□□□ 0.38
MCF2L-213ENST00000421756 NUTM2FA1L443 756 aa17.4■□□□□ 0.38
MCF2L-213ENST00000421756 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.4■□□□□ 0.385e-6■■■■□ 20.3
MCF2L-213ENST00000421756 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
MCF2L-213ENST00000421756 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
MCF2L-213ENST00000421756 SCAF11Q99590 1463 aaKnown RBP17.39■□□□□ 0.37
MCF2L-213ENST00000421756 IDI1Q13907 227 aa17.39■□□□□ 0.37
MCF2L-213ENST00000421756 ABCC1P33527 1531 aa17.38■□□□□ 0.37
MCF2L-213ENST00000421756 DEKP35659 375 aaKnown RBP17.38■□□□□ 0.37
MCF2L-213ENST00000421756 DAXXQ9UER7 740 aaPredicted RBP17.38■□□□□ 0.37
MCF2L-213ENST00000421756 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
MCF2L-213ENST00000421756 POLR1AO95602 1720 aaPredicted RBP17.37■□□□□ 0.37
MCF2L-213ENST00000421756 TCP11L2Q8N4U5 519 aa17.37■□□□□ 0.37
MCF2L-213ENST00000421756 SOX12O15370 315 aa17.37■□□□□ 0.37
MCF2L-213ENST00000421756 TCERG1O14776 1098 aaKnown RBP17.36■□□□□ 0.37
MCF2L-213ENST00000421756 SLFN5Q08AF3 891 aa17.36■□□□□ 0.37
MCF2L-213ENST00000421756 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.36■□□□□ 0.37
MCF2L-213ENST00000421756 NSD3Q9BZ95 1437 aa17.35■□□□□ 0.37
MCF2L-213ENST00000421756 TSR2Q969E8 191 aaKnown RBP17.35■□□□□ 0.37
MCF2L-213ENST00000421756 PRDM15P57071 1507 aaPredicted RBP17.34■□□□□ 0.37
MCF2L-213ENST00000421756 ATP7AQ04656 1500 aa17.33■□□□□ 0.37
MCF2L-213ENST00000421756 BACH2Q9BYV9 841 aa17.33■□□□□ 0.37
MCF2L-213ENST00000421756 PLEKHG5O94827 1062 aa17.33■□□□□ 0.36
MCF2L-213ENST00000421756 UNC13BO14795 1591 aa17.33■□□□□ 0.36
MCF2L-213ENST00000421756 IQGAP3Q86VI3 1631 aa17.33■□□□□ 0.36
MCF2L-213ENST00000421756 E9PCH4 1651 aa17.32■□□□□ 0.36
MCF2L-213ENST00000421756 FAM69CQ0P6D2 419 aa17.32■□□□□ 0.36
MCF2L-213ENST00000421756 NEFMP07197 916 aa17.32■□□□□ 0.36
MCF2L-213ENST00000421756 WWC1Q8IX03 1113 aa17.32■□□□□ 0.36
MCF2L-213ENST00000421756 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
MCF2L-213ENST00000421756 CLTCL1P53675 1640 aa17.31■□□□□ 0.36
MCF2L-213ENST00000421756 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
MCF2L-213ENST00000421756 WAPLQ7Z5K2 1190 aa17.3■□□□□ 0.36
MCF2L-213ENST00000421756 ELL2O00472 640 aaPredicted RBP17.3■□□□□ 0.36
MCF2L-213ENST00000421756 IGHDP01880 384 aa17.29■□□□□ 0.36
MCF2L-213ENST00000421756 SHROOM2Q13796 1616 aa17.29■□□□□ 0.36
MCF2L-213ENST00000421756 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
MCF2L-213ENST00000421756 C14orf93Q9H972 538 aaKnown RBP17.28■□□□□ 0.36
MCF2L-213ENST00000421756 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
MCF2L-213ENST00000421756 PLXNC1O60486 1568 aa17.27■□□□□ 0.36
MCF2L-213ENST00000421756 E9PSI1 815 aa17.27■□□□□ 0.36
MCF2L-213ENST00000421756 SPRYD3Q8NCJ5 442 aa17.27■□□□□ 0.35
MCF2L-213ENST00000421756 CGNL1Q0VF96 1302 aa17.26■□□□□ 0.35
MCF2L-213ENST00000421756 ASXL1Q8IXJ9 1541 aa17.26■□□□□ 0.35
MCF2L-213ENST00000421756 BLMP54132 1417 aaPredicted RBP17.26■□□□□ 0.35
MCF2L-213ENST00000421756 NPATQ14207 1427 aa17.26■□□□□ 0.35
MCF2L-213ENST00000421756 HMOX1P09601 288 aa17.25■□□□□ 0.35
MCF2L-213ENST00000421756 RTEL1-TNFRSF6BF6WH68 1400 aa17.25■□□□□ 0.35
MCF2L-213ENST00000421756 EVC2Q86UK5 1308 aa17.25■□□□□ 0.35
MCF2L-213ENST00000421756 CABP1Q9NZU7 370 aa17.25■□□□□ 0.35
MCF2L-213ENST00000421756 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
MCF2L-213ENST00000421756 RTN4Q9NQC3 1192 aaKnown RBP17.25■□□□□ 0.35
MCF2L-213ENST00000421756 ERVK-7P63135 1459 aa17.25■□□□□ 0.35
MCF2L-213ENST00000421756 RLBP1P12271 317 aa17.24■□□□□ 0.35
MCF2L-213ENST00000421756 ARXQ96QS3 562 aa17.24■□□□□ 0.35
MCF2L-213ENST00000421756 PTPRTO14522 1441 aa17.24■□□□□ 0.35
MCF2L-213ENST00000421756 THUMPD2Q9BTF0 503 aaKnown RBP17.24■□□□□ 0.35
MCF2L-213ENST00000421756 CLASP1Q7Z460 1538 aa17.23■□□□□ 0.35
MCF2L-213ENST00000421756 EIF2AK4Q9P2K8 1649 aaKnown RBP17.23■□□□□ 0.35
MCF2L-213ENST00000421756 RUNDC1Q96C34 613 aa17.23■□□□□ 0.35
MCF2L-213ENST00000421756 MADDQ8WXG6 1647 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms