RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 ADAMTS2O95450 1211 aa9.29□□□□□ -0.92
HDAC8-212ENST00000421523 DEFB132Q7Z7B7 95 aa9.29□□□□□ -0.92
HDAC8-212ENST00000421523 CCDC125Q86Z20 511 aa9.29□□□□□ -0.92
HDAC8-212ENST00000421523 BCANQ96GW7 911 aa9.29□□□□□ -0.92
HDAC8-212ENST00000421523 RTEL1-TNFRSF6BF6WH68 1400 aa9.29□□□□□ -0.92
HDAC8-212ENST00000421523 PIK3C2BO00750 1634 aa9.28□□□□□ -0.92
HDAC8-212ENST00000421523 SENP3-EIF4A1A0A087X0R7 540 aa9.28□□□□□ -0.92
HDAC8-212ENST00000421523 CEP152O94986 1710 aa9.28□□□□□ -0.92
HDAC8-212ENST00000421523 MBD5Q9P267 1494 aa9.28□□□□□ -0.92
HDAC8-212ENST00000421523 TET3O43151 1660 aa9.27□□□□□ -0.93
HDAC8-212ENST00000421523 STAG3Q9UJ98 1225 aa9.27□□□□□ -0.93
HDAC8-212ENST00000421523 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.26□□□□□ -0.93
HDAC8-212ENST00000421523 ATF3P18847 181 aa9.26□□□□□ -0.93
HDAC8-212ENST00000421523 HRCP23327 699 aa9.26□□□□□ -0.93
HDAC8-212ENST00000421523 BRINP3Q76B58 766 aa9.26□□□□□ -0.93
HDAC8-212ENST00000421523 USP21Q9UK80 565 aa9.26□□□□□ -0.93
HDAC8-212ENST00000421523 BLMP54132 1417 aaPredicted RBP9.25□□□□□ -0.93
HDAC8-212ENST00000421523 TRPC5Q9UL62 973 aaPredicted RBP9.25□□□□□ -0.93
HDAC8-212ENST00000421523 EFCAB6Q5THR3 1501 aa9.25□□□□□ -0.93
HDAC8-212ENST00000421523 ASXL1Q8IXJ9 1541 aa9.25□□□□□ -0.93
HDAC8-212ENST00000421523 CASKIN1Q8WXD9 1431 aa9.24□□□□□ -0.93
HDAC8-212ENST00000421523 SETD5Q9C0A6 1442 aa9.24□□□□□ -0.93
HDAC8-212ENST00000421523 CAMSAP2Q08AD1 1489 aa9.24□□□□□ -0.93
HDAC8-212ENST00000421523 UBTFP17480 764 aaKnown RBP9.24□□□□□ -0.93
HDAC8-212ENST00000421523 CADPS2Q86UW7 1296 aa9.24□□□□□ -0.93
HDAC8-212ENST00000421523 PNPLA6Q8IY17 1366 aa9.24□□□□□ -0.93
HDAC8-212ENST00000421523 CCDC141Q6ZP82 1450 aa9.23□□□□□ -0.93
HDAC8-212ENST00000421523 UTRNP46939 3433 aa9.22□□□□□ -0.93
HDAC8-212ENST00000421523 BCL9LQ86UU0 1499 aa9.22□□□□□ -0.93
HDAC8-212ENST00000421523 SF3B2Q13435 895 aaKnown RBP9.22□□□□□ -0.93
HDAC8-212ENST00000421523 DDX17Q92841 729 aaKnown RBP9.22□□□□□ -0.93
HDAC8-212ENST00000421523 MROH1Q8NDA8 1641 aa9.22□□□□□ -0.93
HDAC8-212ENST00000421523 ATRNO75882 1429 aa9.22□□□□□ -0.93
HDAC8-212ENST00000421523 CHD2O14647 1828 aaKnown RBP9.21□□□□□ -0.93
HDAC8-212ENST00000421523 LRRC59Q96AG4 307 aaKnown RBP9.21□□□□□ -0.94
HDAC8-212ENST00000421523 C19orf44Q9H6X5 657 aa9.2□□□□□ -0.94
HDAC8-212ENST00000421523 FYCO1Q9BQS8 1478 aa9.19□□□□□ -0.94
HDAC8-212ENST00000421523 NCOA3Q9Y6Q9 1424 aa9.18□□□□□ -0.94
HDAC8-212ENST00000421523 MTUS2Q5JR59 1369 aa9.17□□□□□ -0.94
HDAC8-212ENST00000421523 R3HDM1Q15032 1099 aaKnown RBP9.17□□□□□ -0.94
HDAC8-212ENST00000421523 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.17□□□□□ -0.94
HDAC8-212ENST00000421523 EIF2AK4Q9P2K8 1649 aaKnown RBP9.16□□□□□ -0.94
HDAC8-212ENST00000421523 UNC13BO14795 1591 aa9.16□□□□□ -0.94
HDAC8-212ENST00000421523 ADGRB3O60242 1522 aa9.16□□□□□ -0.94
HDAC8-212ENST00000421523 PPP1R15AO75807 674 aaPredicted RBP9.16□□□□□ -0.94
HDAC8-212ENST00000421523 IDI1Q13907 227 aa9.16□□□□□ -0.94
HDAC8-212ENST00000421523 FNBP4Q8N3X1 1017 aaPredicted RBP9.16□□□□□ -0.94
HDAC8-212ENST00000421523 BRWD3Q6RI45 1802 aa9.15□□□□□ -0.94
HDAC8-212ENST00000421523 MST1RQ04912 1400 aa9.14□□□□□ -0.95
HDAC8-212ENST00000421523 ARHGAP31Q2M1Z3 1444 aa9.14□□□□□ -0.95
HDAC8-212ENST00000421523 ZNF784Q8NCA9 323 aaPredicted RBP9.14□□□□□ -0.95
HDAC8-212ENST00000421523 GJD4Q96KN9 370 aaPredicted RBP9.14□□□□□ -0.95
HDAC8-212ENST00000421523 PTCH1Q13635 1447 aa9.14□□□□□ -0.95
HDAC8-212ENST00000421523 PLEKHG1Q9ULL1 1385 aa9.13□□□□□ -0.95
HDAC8-212ENST00000421523 DCCP43146 1447 aa9.13□□□□□ -0.95
HDAC8-212ENST00000421523 GLI3P10071 1580 aa9.12□□□□□ -0.95
HDAC8-212ENST00000421523 DCAF8L1A6NGE4 600 aa9.12□□□□□ -0.95
HDAC8-212ENST00000421523 TSPY4P0CV99 314 aa9.12□□□□□ -0.95
HDAC8-212ENST00000421523 TSPY10P0CW01 314 aa9.12□□□□□ -0.95
HDAC8-212ENST00000421523 BAG6P46379 1132 aa9.12□□□□□ -0.95
HDAC8-212ENST00000421523 C1QTNF8P60827 252 aa9.12□□□□□ -0.95
HDAC8-212ENST00000421523 RALGAPBQ86X10 1494 aa9.12□□□□□ -0.95
HDAC8-212ENST00000421523 SPHKAPQ2M3C7 1700 aa9.11□□□□□ -0.95
HDAC8-212ENST00000421523 CAMTA1Q9Y6Y1 1673 aa9.11□□□□□ -0.95
HDAC8-212ENST00000421523 ZFYVE9O95405 1425 aa9.11□□□□□ -0.95
HDAC8-212ENST00000421523 ARHGEF5Q12774 1597 aa9.11□□□□□ -0.95
HDAC8-212ENST00000421523 MYO5BQ9ULV0 1848 aa9.1□□□□□ -0.95
HDAC8-212ENST00000421523 EN1Q05925 392 aaPredicted RBP9.1□□□□□ -0.95
HDAC8-212ENST00000421523 RIMS2Q9UQ26 1411 aa9.1□□□□□ -0.95
HDAC8-212ENST00000421523 SEPT12Q8IYM1 358 aa9.09□□□□□ -0.95
HDAC8-212ENST00000421523 TBX22Q9Y458 520 aa9.09□□□□□ -0.95
HDAC8-212ENST00000421523 TRPM2O94759 1503 aa9.09□□□□□ -0.95
HDAC8-212ENST00000421523 EHBP1L1Q8N3D4 1523 aa9.09□□□□□ -0.95
HDAC8-212ENST00000421523 ADAMTS13Q76LX8 1427 aa9.08□□□□□ -0.96
HDAC8-212ENST00000421523 RSPH4AQ5TD94 716 aa9.08□□□□□ -0.96
HDAC8-212ENST00000421523 PPP1R1BQ9UD71 204 aaPredicted RBP9.08□□□□□ -0.96
HDAC8-212ENST00000421523 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
HDAC8-212ENST00000421523 MARF1Q9Y4F3 1742 aaKnown RBP9.08□□□□□ -0.96
HDAC8-212ENST00000421523 GCC2Q8IWJ2 1684 aa9.07□□□□□ -0.96
HDAC8-212ENST00000421523 COL22A1Q8NFW1 1626 aaPredicted RBP9.07□□□□□ -0.96
HDAC8-212ENST00000421523 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.07□□□□□ -0.96
HDAC8-212ENST00000421523 MYOM2P54296 1465 aa9.07□□□□□ -0.96
HDAC8-212ENST00000421523 PTPRUQ92729 1446 aa9.06□□□□□ -0.96
HDAC8-212ENST00000421523 DUOX2Q9NRD8 1548 aa9.06□□□□□ -0.96
HDAC8-212ENST00000421523 A0A0G2JS52 829 aa9.06□□□□□ -0.96
HDAC8-212ENST00000421523 MYT1Q01538 1121 aa9.06□□□□□ -0.96
HDAC8-212ENST00000421523 KRT27Q7Z3Y8 459 aa9.06□□□□□ -0.96
HDAC8-212ENST00000421523 CEP162Q5TB80 1403 aa9.05□□□□□ -0.96
HDAC8-212ENST00000421523 KANK1Q14678 1352 aa9.05□□□□□ -0.96
HDAC8-212ENST00000421523 PIK3R4Q99570 1358 aa9.05□□□□□ -0.96
HDAC8-212ENST00000421523 NALCNQ8IZF0 1738 aa9.05□□□□□ -0.96
HDAC8-212ENST00000421523 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
HDAC8-212ENST00000421523 NINLQ9Y2I6 1382 aa9.04□□□□□ -0.96
HDAC8-212ENST00000421523 UNC5CLQ8IV45 518 aa9.04□□□□□ -0.96
HDAC8-212ENST00000421523 RGPD1P0DJD0 1748 aa9.04□□□□□ -0.96
HDAC8-212ENST00000421523 XRN1Q8IZH2 1706 aaKnown RBP9.04□□□□□ -0.96
HDAC8-212ENST00000421523 LAMC1P11047 1609 aa9.04□□□□□ -0.96
HDAC8-212ENST00000421523 NOS1P29475 1434 aa9.04□□□□□ -0.96
HDAC8-212ENST00000421523 ADGRL3Q9HAR2 1447 aa9.04□□□□□ -0.96
HDAC8-212ENST00000421523 C1orf167Q5SNV9 1468 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms