RNA–Protein interactions for RNA: ENST00000421516.1

MYD88-204, Transcript of MYD88, innate immune signal transduction adaptor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MYD88, Length 2,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MYD88-204ENST00000421516 MROH2AA6NES4 1674 aa18.28■□□□□ 0.52
MYD88-204ENST00000421516 TMC1Q8TDI8 760 aa18.27■□□□□ 0.52
MYD88-204ENST00000421516 STAC3Q96MF2 364 aa18.26■□□□□ 0.51
MYD88-204ENST00000421516 SIGLEC1Q9BZZ2 1709 aa18.26■□□□□ 0.51
MYD88-204ENST00000421516 REREQ9P2R6 1566 aa18.26■□□□□ 0.51
MYD88-204ENST00000421516 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
MYD88-204ENST00000421516 NUTM2DQ5VT03 806 aaPredicted RBP18.25■□□□□ 0.51
MYD88-204ENST00000421516 COL17A1Q9UMD9 1497 aaPredicted RBP18.24■□□□□ 0.51
MYD88-204ENST00000421516 TESK2Q96S53 571 aa18.24■□□□□ 0.51
MYD88-204ENST00000421516 ARID4BQ4LE39 1312 aaPredicted RBP18.24■□□□□ 0.51
MYD88-204ENST00000421516 ADGRB3O60242 1522 aa18.22■□□□□ 0.51
MYD88-204ENST00000421516 ARHGAP31Q2M1Z3 1444 aa18.22■□□□□ 0.51
MYD88-204ENST00000421516 NOS1P29475 1434 aa18.22■□□□□ 0.51
MYD88-204ENST00000421516 AGLP35573 1532 aa18.22■□□□□ 0.51
MYD88-204ENST00000421516 PANK3Q9H999 370 aa18.21■□□□□ 0.51
MYD88-204ENST00000421516 KIAA1210Q9ULL0 1709 aa18.21■□□□□ 0.51
MYD88-204ENST00000421516 MYOM2P54296 1465 aa18.2■□□□□ 0.5
MYD88-204ENST00000421516 SYNMO15061 1565 aa18.2■□□□□ 0.5
MYD88-204ENST00000421516 ARHGEF40Q8TER5 1519 aa18.2■□□□□ 0.5
MYD88-204ENST00000421516 CFAP70Q5T0N1 1121 aa18.2■□□□□ 0.5
MYD88-204ENST00000421516 PIK3C2BO00750 1634 aa18.19■□□□□ 0.5
MYD88-204ENST00000421516 IQGAP1P46940 1657 aa18.18■□□□□ 0.5
MYD88-204ENST00000421516 PPLO60437 1756 aa18.18■□□□□ 0.5
MYD88-204ENST00000421516 ADGRF5Q8IZF2 1346 aa18.18■□□□□ 0.5
MYD88-204ENST00000421516 PREX1Q8TCU6 1659 aa18.17■□□□□ 0.5
MYD88-204ENST00000421516 TMF1P82094 1093 aa18.17■□□□□ 0.5
MYD88-204ENST00000421516 ZBED9Q6R2W3 1325 aa18.17■□□□□ 0.5
MYD88-204ENST00000421516 PNISRQ8TF01 805 aaKnown RBP18.15■□□□□ 0.5
MYD88-204ENST00000421516 TSHZ2Q9NRE2 1034 aa18.15■□□□□ 0.5
MYD88-204ENST00000421516 CLTCQ00610 1675 aaKnown RBP18.14■□□□□ 0.49
MYD88-204ENST00000421516 MYBBP1AQ9BQG0 1328 aaKnown RBP18.14■□□□□ 0.49
MYD88-204ENST00000421516 NRXN1Q9ULB1 1477 aa18.13■□□□□ 0.49
MYD88-204ENST00000421516 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
MYD88-204ENST00000421516 KTN1Q86UP2 1357 aaKnown RBP18.12■□□□□ 0.49
MYD88-204ENST00000421516 SCAF11Q99590 1463 aaKnown RBP18.12■□□□□ 0.49
MYD88-204ENST00000421516 PER1O15534 1290 aaPredicted RBP18.11■□□□□ 0.49
MYD88-204ENST00000421516 RPGRIP1LQ68CZ1 1315 aa18.11■□□□□ 0.49
MYD88-204ENST00000421516 MYO5BQ9ULV0 1848 aa18.1■□□□□ 0.49
MYD88-204ENST00000421516 TMEM132EQ6IEE7 984 aa18.09■□□□□ 0.49
MYD88-204ENST00000421516 IDI1Q13907 227 aa18.09■□□□□ 0.49
MYD88-204ENST00000421516 MLECQ14165 292 aa18.09■□□□□ 0.49
MYD88-204ENST00000421516 SLC52A1Q9NWF4 448 aa18.09■□□□□ 0.49
MYD88-204ENST00000421516 RALBP1Q15311 655 aa18.08■□□□□ 0.48
MYD88-204ENST00000421516 TRAK1Q9UPV9 953 aa18.08■□□□□ 0.48
MYD88-204ENST00000421516 ERVK-7P63135 1459 aa18.07■□□□□ 0.48
MYD88-204ENST00000421516 FBXO31Q5XUX0 539 aaPredicted RBP18.06■□□□□ 0.48
MYD88-204ENST00000421516 B4GALNT3Q6L9W6 998 aa18.06■□□□□ 0.48
MYD88-204ENST00000421516 NEXMIFQ5QGS0 1516 aa18.06■□□□□ 0.48
MYD88-204ENST00000421516 PIK3C2GO75747 1445 aa18.06■□□□□ 0.48
MYD88-204ENST00000421516 TMEM131LA2VDJ0 1609 aa18.06■□□□□ 0.48
MYD88-204ENST00000421516 NLRP13Q86W25 1043 aa18.06■□□□□ 0.48
MYD88-204ENST00000421516 EIF3AQ14152 1382 aaKnown RBP18.05■□□□□ 0.48
MYD88-204ENST00000421516 SAFB2Q14151 953 aaKnown RBP eCLIP18.05■□□□□ 0.48
MYD88-204ENST00000421516 SETBP1Q9Y6X0 1596 aa18.05■□□□□ 0.48
MYD88-204ENST00000421516 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
MYD88-204ENST00000421516 PARD3Q8TEW0 1356 aa18.03■□□□□ 0.48
MYD88-204ENST00000421516 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.48
MYD88-204ENST00000421516 SPATA31D1Q6ZQQ2 1576 aa18.02■□□□□ 0.48
MYD88-204ENST00000421516 C14orf93Q9H972 538 aaKnown RBP18.02■□□□□ 0.47
MYD88-204ENST00000421516 VGFO15240 615 aaPredicted RBP18.01■□□□□ 0.47
MYD88-204ENST00000421516 TRHP20396 242 aaPredicted RBP18.01■□□□□ 0.47
MYD88-204ENST00000421516 ESF1Q9H501 851 aaKnown RBP18■□□□□ 0.47
MYD88-204ENST00000421516 NUDCQ9Y266 331 aa18■□□□□ 0.47
MYD88-204ENST00000421516 MYO3AQ8NEV4 1616 aa17.99■□□□□ 0.47
MYD88-204ENST00000421516 TNNT2P45379 298 aaPredicted RBP17.99■□□□□ 0.47
MYD88-204ENST00000421516 CDCA7LQ96GN5 454 aa17.99■□□□□ 0.47
MYD88-204ENST00000421516 ADGRB1O14514 1584 aa17.98■□□□□ 0.47
MYD88-204ENST00000421516 ZFYVE9O95405 1425 aa17.98■□□□□ 0.47
MYD88-204ENST00000421516 STK26Q9P289 416 aa17.97■□□□□ 0.47
MYD88-204ENST00000421516 CDCA8Q53HL2 280 aa17.96■□□□□ 0.47
MYD88-204ENST00000421516 KDM5AP29375 1690 aaKnown RBP17.96■□□□□ 0.47
MYD88-204ENST00000421516 LRPPRCP42704 1394 aaKnown RBP17.96■□□□□ 0.47
MYD88-204ENST00000421516 ZMYM3Q14202 1370 aa17.96■□□□□ 0.47
MYD88-204ENST00000421516 STAG3Q9UJ98 1225 aa17.95■□□□□ 0.46
MYD88-204ENST00000421516 SLC24A1O60721 1099 aa17.94■□□□□ 0.46
MYD88-204ENST00000421516 AMER1Q5JTC6 1135 aaPredicted RBP17.94■□□□□ 0.46
MYD88-204ENST00000421516 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
MYD88-204ENST00000421516 PPP2R1AP30153 589 aa17.93■□□□□ 0.46
MYD88-204ENST00000421516 QRICH2Q9H0J4 1663 aa17.93■□□□□ 0.46
MYD88-204ENST00000421516 SMG6Q86US8 1419 aaKnown RBP17.93■□□□□ 0.46
MYD88-204ENST00000421516 CCDC146Q8IYE0 955 aa17.93■□□□□ 0.46
MYD88-204ENST00000421516 MYOM1P52179 1685 aa17.92■□□□□ 0.46
MYD88-204ENST00000421516 CENPJQ9HC77 1338 aaPredicted RBP17.92■□□□□ 0.46
MYD88-204ENST00000421516 A2ML1A8K2U0 1454 aa17.91■□□□□ 0.46
MYD88-204ENST00000421516 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
MYD88-204ENST00000421516 ARHGEF28Q8N1W1 1705 aaKnown RBP17.91■□□□□ 0.46
MYD88-204ENST00000421516 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
MYD88-204ENST00000421516 PPP4R2Q9NY27 417 aa17.91■□□□□ 0.46
MYD88-204ENST00000421516 CARD14Q9BXL6 1004 aa17.9■□□□□ 0.46
MYD88-204ENST00000421516 WDR43Q15061 677 aaKnown RBP eCLIP17.89■□□□□ 0.45
MYD88-204ENST00000421516 ASXL1Q8IXJ9 1541 aa17.88■□□□□ 0.45
MYD88-204ENST00000421516 PLIN1O60240 522 aa17.87■□□□□ 0.45
MYD88-204ENST00000421516 RIMS2Q9UQ26 1411 aa17.86■□□□□ 0.45
MYD88-204ENST00000421516 TNRQ92752 1358 aa17.86■□□□□ 0.45
MYD88-204ENST00000421516 RBM19Q9Y4C8 960 aaKnown RBP17.86■□□□□ 0.45
MYD88-204ENST00000421516 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
MYD88-204ENST00000421516 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
MYD88-204ENST00000421516 CABP2Q9NPB3 220 aa17.85■□□□□ 0.45
MYD88-204ENST00000421516 DNAJC5Q9H3Z4 198 aa17.85■□□□□ 0.45
MYD88-204ENST00000421516 FER1L4A9Z1Z3 1794 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms