RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 ADAMTS12P58397 1594 aa21.25■□□□□ 0.99
PKP4-204ENST00000421462 MAPK8IP3Q9UPT6 1336 aa21.25■□□□□ 0.99
PKP4-204ENST00000421462 PKNOX2Q96KN3 472 aa21.24■□□□□ 0.99
PKP4-204ENST00000421462 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
PKP4-204ENST00000421462 MAGI2Q86UL8 1455 aa21.24■□□□□ 0.99
PKP4-204ENST00000421462 E9PSI1 815 aa21.24■□□□□ 0.99
PKP4-204ENST00000421462 MFAP1P55081 439 aaKnown RBP21.24■□□□□ 0.99
PKP4-204ENST00000421462 ITSN2Q9NZM3 1697 aa21.23■□□□□ 0.99
PKP4-204ENST00000421462 ANTXR1Q9H6X2 564 aa21.23■□□□□ 0.99
PKP4-204ENST00000421462 EIF3AQ14152 1382 aaKnown RBP21.23■□□□□ 0.99
PKP4-204ENST00000421462 CGNL1Q0VF96 1302 aa21.23■□□□□ 0.99
PKP4-204ENST00000421462 NKTRP30414 1462 aaKnown RBP21.23■□□□□ 0.99
PKP4-204ENST00000421462 A2MP01023 1474 aa21.23■□□□□ 0.99
PKP4-204ENST00000421462 PDZRN3Q9UPQ7 1066 aa21.23■□□□□ 0.99
PKP4-204ENST00000421462 TRPM1Q7Z4N2 1603 aa21.22■□□□□ 0.99
PKP4-204ENST00000421462 PCDHB15Q9Y5E8 787 aa21.22■□□□□ 0.99
PKP4-204ENST00000421462 GLIPR1L2Q4G1C9 344 aa21.21■□□□□ 0.99
PKP4-204ENST00000421462 MCM4P33991 863 aa21.2■□□□□ 0.99
PKP4-204ENST00000421462 HSP90AA2PQ14568 343 aaPredicted RBP21.2■□□□□ 0.99
PKP4-204ENST00000421462 HSP90AA1P07900 732 aaKnown RBP21.2■□□□□ 0.98
PKP4-204ENST00000421462 FAM135AQ9P2D6 1515 aa21.19■□□□□ 0.98
PKP4-204ENST00000421462 RLBP1P12271 317 aa21.19■□□□□ 0.98
PKP4-204ENST00000421462 CROCC2H7BZ55 1655 aa21.19■□□□□ 0.98
PKP4-204ENST00000421462 TRAK2O60296 914 aa21.18■□□□□ 0.98
PKP4-204ENST00000421462 TBC1D32Q96NH3 1257 aa21.18■□□□□ 0.98
PKP4-204ENST00000421462 TRMT2AQ8IZ69 625 aaKnown RBP21.18■□□□□ 0.98
PKP4-204ENST00000421462 PDE3AQ14432 1141 aa21.16■□□□□ 0.98
PKP4-204ENST00000421462 INSRP06213 1382 aa21.16■□□□□ 0.98
PKP4-204ENST00000421462 JPH4Q96JJ6 628 aa21.15■□□□□ 0.98
PKP4-204ENST00000421462 GPRASP1Q5JY77 1395 aa21.15■□□□□ 0.98
PKP4-204ENST00000421462 WWC1Q8IX03 1113 aa21.14■□□□□ 0.98
PKP4-204ENST00000421462 ZMYND15Q9H091 742 aa21.14■□□□□ 0.98
PKP4-204ENST00000421462 PLA2R1Q13018 1463 aa21.14■□□□□ 0.97
PKP4-204ENST00000421462 FOXD4L1Q9NU39 408 aa21.13■□□□□ 0.97
PKP4-204ENST00000421462 MYH16Q9H6N6 1097 aa21.13■□□□□ 0.97
PKP4-204ENST00000421462 PMFBP1Q8TBY8 1022 aa21.13■□□□□ 0.97
PKP4-204ENST00000421462 WDR7Q9Y4E6 1490 aa21.12■□□□□ 0.97
PKP4-204ENST00000421462 CDC42BPAQ5VT25 1732 aa21.12■□□□□ 0.97
PKP4-204ENST00000421462 C22orf23Q9BZE7 217 aa21.11■□□□□ 0.97
PKP4-204ENST00000421462 PTPRGP23470 1445 aa21.1■□□□□ 0.97
PKP4-204ENST00000421462 PRDM15P57071 1507 aaPredicted RBP21.1■□□□□ 0.97
PKP4-204ENST00000421462 CLCN1P35523 988 aa21.1■□□□□ 0.97
PKP4-204ENST00000421462 CDCA8Q53HL2 280 aa21.1■□□□□ 0.97
PKP4-204ENST00000421462 TRIM44Q96DX7 344 aaPredicted RBP21.09■□□□□ 0.97
PKP4-204ENST00000421462 RARSP54136 660 aaKnown RBP21.09■□□□□ 0.97
PKP4-204ENST00000421462 CHMP5Q9NZZ3 219 aa21.09■□□□□ 0.97
PKP4-204ENST00000421462 EIF4G3O43432 1585 aaKnown RBP21.09■□□□□ 0.97
PKP4-204ENST00000421462 RWDD1Q9H446 243 aaPredicted RBP21.08■□□□□ 0.97
PKP4-204ENST00000421462 MAGI1Q96QZ7 1491 aaPredicted RBP21.08■□□□□ 0.96
PKP4-204ENST00000421462 NLRP1Q9C000 1473 aa21.08■□□□□ 0.96
PKP4-204ENST00000421462 FSD2A1L4K1 749 aa21.08■□□□□ 0.96
PKP4-204ENST00000421462 GRPEL1Q9HAV7 217 aa21.08■□□□□ 0.96
PKP4-204ENST00000421462 FTSJ3Q8IY81 847 aaKnown RBP21.07■□□□□ 0.96
PKP4-204ENST00000421462 ADCY10Q96PN6 1610 aa21.06■□□□□ 0.96
PKP4-204ENST00000421462 MRE11P49959 708 aa21.06■□□□□ 0.96
PKP4-204ENST00000421462 HSCBQ8IWL3 235 aa21.06■□□□□ 0.96
PKP4-204ENST00000421462 GRIN2AQ12879 1464 aa21.05■□□□□ 0.96
PKP4-204ENST00000421462 ERBB4Q15303 1308 aa21.05■□□□□ 0.96
PKP4-204ENST00000421462 ESPNB1AK53 854 aa21.05■□□□□ 0.96
PKP4-204ENST00000421462 TCP11L2Q8N4U5 519 aa21.05■□□□□ 0.96
PKP4-204ENST00000421462 SHANK2Q9UPX8 1470 aa21.04■□□□□ 0.96
PKP4-204ENST00000421462 CARD14Q9BXL6 1004 aa21.03■□□□□ 0.96
PKP4-204ENST00000421462 ASXL1Q8IXJ9 1541 aa21.03■□□□□ 0.96
PKP4-204ENST00000421462 CARMIL2Q6F5E8 1435 aa21.02■□□□□ 0.96
PKP4-204ENST00000421462 ATP10BO94823 1461 aa21.02■□□□□ 0.96
PKP4-204ENST00000421462 PIK3C2GO75747 1445 aa21■□□□□ 0.95
PKP4-204ENST00000421462 MORC1Q86VD1 984 aa21■□□□□ 0.95
PKP4-204ENST00000421462 ABCC10Q5T3U5 1492 aa21■□□□□ 0.95
PKP4-204ENST00000421462 CCDC141Q6ZP82 1450 aa21■□□□□ 0.95
PKP4-204ENST00000421462 VIRMAQ69YN4 1812 aaKnown RBP20.99■□□□□ 0.95
PKP4-204ENST00000421462 GAS2L3Q86XJ1 694 aa20.99■□□□□ 0.95
PKP4-204ENST00000421462 ITPRIPQ8IWB1 547 aa20.99■□□□□ 0.95
PKP4-204ENST00000421462 TSR2Q969E8 191 aaKnown RBP20.99■□□□□ 0.95
PKP4-204ENST00000421462 CFAP70Q5T0N1 1121 aa20.98■□□□□ 0.95
PKP4-204ENST00000421462 HSP90AB1P08238 724 aaKnown RBP20.98■□□□□ 0.95
PKP4-204ENST00000421462 MYO5CQ9NQX4 1742 aa20.97■□□□□ 0.95
PKP4-204ENST00000421462 RRP9O43818 475 aaKnown RBP20.97■□□□□ 0.95
PKP4-204ENST00000421462 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
PKP4-204ENST00000421462 DDX11L8A8MPP1 907 aa20.96■□□□□ 0.95
PKP4-204ENST00000421462 TNPO1Q92973 898 aaKnown RBP20.95■□□□□ 0.94
PKP4-204ENST00000421462 ARID3AQ99856 593 aa20.95■□□□□ 0.94
PKP4-204ENST00000421462 SMC4Q9NTJ3 1288 aa20.94■□□□□ 0.94
PKP4-204ENST00000421462 MVPQ14764 893 aaKnown RBP20.94■□□□□ 0.94
PKP4-204ENST00000421462 RUNDC1Q96C34 613 aa20.94■□□□□ 0.94
PKP4-204ENST00000421462 DZIP1LQ8IYY4 767 aaKnown RBP20.93■□□□□ 0.94
PKP4-204ENST00000421462 LNPKQ9C0E8 428 aa20.93■□□□□ 0.94
PKP4-204ENST00000421462 U2AF1L5P0DN76 240 aaPredicted RBP20.92■□□□□ 0.94
PKP4-204ENST00000421462 U2AF1Q01081 240 aaKnown RBP eCLIP20.92■□□□□ 0.94
PKP4-204ENST00000421462 ZKSCAN2Q63HK3 967 aa20.92■□□□□ 0.94
PKP4-204ENST00000421462 SYCP2Q9BX26 1530 aa20.92■□□□□ 0.94
PKP4-204ENST00000421462 EIF2AK4Q9P2K8 1649 aaKnown RBP20.91■□□□□ 0.94
PKP4-204ENST00000421462 MTHFSP49914 203 aa20.91■□□□□ 0.94
PKP4-204ENST00000421462 RSPH4AQ5TD94 716 aa20.91■□□□□ 0.94
PKP4-204ENST00000421462 SLC12A5Q9H2X9 1139 aa20.91■□□□□ 0.94
PKP4-204ENST00000421462 NINLQ9Y2I6 1382 aa20.91■□□□□ 0.94
PKP4-204ENST00000421462 CHGAP10645 457 aaKnown RBP20.91■□□□□ 0.94
PKP4-204ENST00000421462 RBM10P98175 930 aaKnown RBP20.9■□□□□ 0.94
PKP4-204ENST00000421462 NCLP19338 710 aaKnown RBP20.9■□□□□ 0.94
PKP4-204ENST00000421462 CLASP1Q7Z460 1538 aa20.9■□□□□ 0.94
PKP4-204ENST00000421462 ABCC2Q92887 1545 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms