RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.95□□□□□ -1.14
SCG2-202ENST00000421386 WDR70Q9NW82 654 aa7.95□□□□□ -1.14
SCG2-202ENST00000421386 NRG2O14511 850 aaPredicted RBP7.92□□□□□ -1.14
SCG2-202ENST00000421386 LAPTM4AQ15012 233 aa7.92□□□□□ -1.14
SCG2-202ENST00000421386 GTF3C3Q9Y5Q9 886 aa7.92□□□□□ -1.14
SCG2-202ENST00000421386 TSHZ2Q9NRE2 1034 aa7.91□□□□□ -1.14
SCG2-202ENST00000421386 V9GY48 417 aaPredicted RBP7.91□□□□□ -1.14
SCG2-202ENST00000421386 TLL1O43897 1013 aa7.9□□□□□ -1.14
SCG2-202ENST00000421386 NEUROD1Q13562 356 aa7.9□□□□□ -1.14
SCG2-202ENST00000421386 FAM161AQ3B820 660 aa7.9□□□□□ -1.14
SCG2-202ENST00000421386 BLOC1S3Q6QNY0 202 aa7.89□□□□□ -1.15
SCG2-202ENST00000421386 TRIM67Q6ZTA4 783 aa7.89□□□□□ -1.15
SCG2-202ENST00000421386 ZPR1O75312 459 aa7.88□□□□□ -1.15
SCG2-202ENST00000421386 SLF2Q8IX21 1173 aa7.88□□□□□ -1.15
SCG2-202ENST00000421386 KCNV2Q8TDN2 545 aa7.88□□□□□ -1.15
SCG2-202ENST00000421386 CLSPNQ9HAW4 1339 aa7.87□□□□□ -1.15
SCG2-202ENST00000421386 HDGFP51858 240 aaKnown RBP7.87□□□□□ -1.15
SCG2-202ENST00000421386 PDZRN3Q9UPQ7 1066 aa7.87□□□□□ -1.15
SCG2-202ENST00000421386 PTGDRQ13258 359 aa7.86□□□□□ -1.15
SCG2-202ENST00000421386 MYO15BQ96JP2 1530 aa7.86□□□□□ -1.15
SCG2-202ENST00000421386 RNF223E7ERA6 249 aa7.85□□□□□ -1.15
SCG2-202ENST00000421386 PPEF1O14829 653 aaPredicted RBP7.84□□□□□ -1.15
SCG2-202ENST00000421386 TRIM26Q12899 539 aaPredicted RBP7.84□□□□□ -1.15
SCG2-202ENST00000421386 PCDHB3Q9Y5E6 796 aa7.84□□□□□ -1.15
SCG2-202ENST00000421386 ADGRG1Q9Y653 693 aa7.84□□□□□ -1.15
SCG2-202ENST00000421386 SLC10A3P09131 477 aa7.82□□□□□ -1.16
SCG2-202ENST00000421386 ARHGEF1Q92888 912 aaKnown RBP7.82□□□□□ -1.16
SCG2-202ENST00000421386 TMEM134Q9H6X4 195 aa7.82□□□□□ -1.16
SCG2-202ENST00000421386 S1PR4O95977 384 aa7.81□□□□□ -1.16
SCG2-202ENST00000421386 RCCD1A6NED2 376 aa7.8□□□□□ -1.16
SCG2-202ENST00000421386 DNAJB2P25686 324 aa7.8□□□□□ -1.16
SCG2-202ENST00000421386 ZNF787Q6DD87 383 aa7.8□□□□□ -1.16
SCG2-202ENST00000421386 LIAT1Q6ZQX7 453 aa7.8□□□□□ -1.16
SCG2-202ENST00000421386 TMUB1Q9BVT8 246 aa7.8□□□□□ -1.16
SCG2-202ENST00000421386 GGCXP38435 758 aa7.79□□□□□ -1.16
SCG2-202ENST00000421386 SLC19A1P41440 591 aa7.79□□□□□ -1.16
SCG2-202ENST00000421386 PLA2G2CQ5R387 149 aa7.79□□□□□ -1.16
SCG2-202ENST00000421386 POTECB2RU33 542 aa7.78□□□□□ -1.16
SCG2-202ENST00000421386 ACTN4O43707 911 aaKnown RBP7.78□□□□□ -1.16
SCG2-202ENST00000421386 CFHP08603 1231 aa7.78□□□□□ -1.16
SCG2-202ENST00000421386 NECTIN2Q92692 538 aa7.78□□□□□ -1.16
SCG2-202ENST00000421386 NUTM2FA1L443 756 aa7.77□□□□□ -1.17
SCG2-202ENST00000421386 EIF5BO60841 1220 aaKnown RBP7.77□□□□□ -1.17
SCG2-202ENST00000421386 SPRYD7Q5W111 196 aa7.77□□□□□ -1.17
SCG2-202ENST00000421386 ZNF775Q96BV0 537 aaPredicted RBP7.77□□□□□ -1.17
SCG2-202ENST00000421386 SEMA3EO15041 775 aa7.76□□□□□ -1.17
SCG2-202ENST00000421386 RBM46Q8TBY0 533 aaKnown RBP7.76□□□□□ -1.17
SCG2-202ENST00000421386 UBE2Q2Q8WVN8 375 aa7.76□□□□□ -1.17
SCG2-202ENST00000421386 ANKLE1Q8NAG6 615 aa7.75□□□□□ -1.17
SCG2-202ENST00000421386 TNFRSF10AO00220 468 aa7.74□□□□□ -1.17
SCG2-202ENST00000421386 PUS10Q3MIT2 529 aaKnown RBP7.74□□□□□ -1.17
SCG2-202ENST00000421386 ZNF598Q86UK7 904 aaKnown RBP7.74□□□□□ -1.17
SCG2-202ENST00000421386 PRR14Q9BWN1 585 aa7.74□□□□□ -1.17
SCG2-202ENST00000421386 GDF9O60383 454 aa7.73□□□□□ -1.17
SCG2-202ENST00000421386 FECHP22830 423 aa7.73□□□□□ -1.17
SCG2-202ENST00000421386 SLC4A3P48751 1232 aa7.73□□□□□ -1.17
SCG2-202ENST00000421386 PXYLP1Q8TE99 480 aa7.73□□□□□ -1.17
SCG2-202ENST00000421386 ADH1BP00325 375 aa7.72□□□□□ -1.17
SCG2-202ENST00000421386 ZNF697Q5TEC3 545 aa7.72□□□□□ -1.17
SCG2-202ENST00000421386 NLRP7Q8WX94 980 aa7.72□□□□□ -1.17
SCG2-202ENST00000421386 PRR20EP86478 221 aa7.71□□□□□ -1.18
SCG2-202ENST00000421386 PRR20CP86479 221 aa7.71□□□□□ -1.18
SCG2-202ENST00000421386 PRR20DP86480 221 aa7.71□□□□□ -1.18
SCG2-202ENST00000421386 PRR20BP86481 221 aa7.71□□□□□ -1.18
SCG2-202ENST00000421386 PRR20AP86496 221 aa7.71□□□□□ -1.18
SCG2-202ENST00000421386 KMT5BQ4FZB7 885 aa7.71□□□□□ -1.18
SCG2-202ENST00000421386 ST8SIA5O15466 376 aa7.7□□□□□ -1.18
SCG2-202ENST00000421386 PLCB2Q00722 1185 aa7.7□□□□□ -1.18
SCG2-202ENST00000421386 ERICH6BQ5W0A0 696 aa7.7□□□□□ -1.18
SCG2-202ENST00000421386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.69□□□□□ -1.18
SCG2-202ENST00000421386 FAM187AA6NFU0 413 aa7.69□□□□□ -1.18
SCG2-202ENST00000421386 GPR37O15354 613 aa7.69□□□□□ -1.18
SCG2-202ENST00000421386 FCHSD2O94868 740 aa7.69□□□□□ -1.18
SCG2-202ENST00000421386 PKDCCQ504Y2 493 aa7.69□□□□□ -1.18
SCG2-202ENST00000421386 RBM26Q5T8P6 1007 aaKnown RBP7.69□□□□□ -1.18
SCG2-202ENST00000421386 METTL3Q86U44 580 aaKnown RBP7.69□□□□□ -1.18
SCG2-202ENST00000421386 SCUBE3Q8IX30 993 aa7.69□□□□□ -1.18
SCG2-202ENST00000421386 SLC6A16Q9GZN6 736 aa7.69□□□□□ -1.18
SCG2-202ENST00000421386 PKD2L1Q9P0L9 805 aa7.69□□□□□ -1.18
SCG2-202ENST00000421386 DGAT1O75907 488 aa7.67□□□□□ -1.18
SCG2-202ENST00000421386 NR1I2O75469 434 aa7.66□□□□□ -1.18
SCG2-202ENST00000421386 PHOX2BQ99453 314 aa7.66□□□□□ -1.18
SCG2-202ENST00000421386 SPSB2Q99619 263 aa7.65□□□□□ -1.18
SCG2-202ENST00000421386 PRDM9Q9NQV7 894 aa7.65□□□□□ -1.18
SCG2-202ENST00000421386 DACH1Q9UI36 760 aa7.65□□□□□ -1.18
SCG2-202ENST00000421386 FOXC1Q12948 553 aa7.64□□□□□ -1.19
SCG2-202ENST00000421386 FAM160A2Q8N612 972 aaPredicted RBP7.64□□□□□ -1.19
SCG2-202ENST00000421386 THAP11Q96EK4 314 aa7.64□□□□□ -1.19
SCG2-202ENST00000421386 AAASQ9NRG9 546 aa7.64□□□□□ -1.19
SCG2-202ENST00000421386 TESPA1A2RU30 521 aaPredicted RBP7.63□□□□□ -1.19
SCG2-202ENST00000421386 MORN1Q5T089 497 aa7.63□□□□□ -1.19
SCG2-202ENST00000421386 OATP04181 439 aa7.62□□□□□ -1.19
SCG2-202ENST00000421386 FUT2Q10981 343 aa7.62□□□□□ -1.19
SCG2-202ENST00000421386 HIC1Q14526 733 aa7.62□□□□□ -1.19
SCG2-202ENST00000421386 LCE2AQ5TA79 106 aaPredicted RBP7.62□□□□□ -1.19
SCG2-202ENST00000421386 P3H3Q8IVL6 736 aa7.62□□□□□ -1.19
SCG2-202ENST00000421386 DIEXFQ68CQ4 756 aaKnown RBP7.61□□□□□ -1.19
SCG2-202ENST00000421386 SLC27A5Q9Y2P5 690 aa7.61□□□□□ -1.19
SCG2-202ENST00000421386 FCF1Q9Y324 198 aaKnown RBP7.61□□□□□ -1.19
SCG2-202ENST00000421386 RDH13Q8NBN7 331 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms