RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 SMG6Q86US8 1419 aaKnown RBP13.73□□□□□ -0.21
FN1-207ENST00000421182 MYBBP1AQ9BQG0 1328 aaKnown RBP13.73□□□□□ -0.21
FN1-207ENST00000421182 KANK4Q5T7N3 995 aaPredicted RBP13.73□□□□□ -0.21
FN1-207ENST00000421182 ATP6V1DQ9Y5K8 247 aa13.73□□□□□ -0.21
FN1-207ENST00000421182 TPM2P07951 284 aa13.72□□□□□ -0.21
FN1-207ENST00000421182 RUFY2Q8WXA3 655 aa13.72□□□□□ -0.21
FN1-207ENST00000421182 SETD1BQ9UPS6 1966 aaKnown RBP13.72□□□□□ -0.21
FN1-207ENST00000421182 TSPOAP1O95153 1857 aa13.72□□□□□ -0.21
FN1-207ENST00000421182 C9orf78Q9NZ63 289 aaPredicted RBP13.72□□□□□ -0.21
FN1-207ENST00000421182 BICRAQ9NZM4 1560 aa13.71□□□□□ -0.21
FN1-207ENST00000421182 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
FN1-207ENST00000421182 TSR1Q2NL82 804 aaKnown RBP13.71□□□□□ -0.22
FN1-207ENST00000421182 B4GALNT3Q6L9W6 998 aa13.71□□□□□ -0.22
FN1-207ENST00000421182 SENP3-EIF4A1A0A087X0R7 540 aa13.71□□□□□ -0.22
FN1-207ENST00000421182 PRM3Q9NNZ6 103 aa13.71□□□□□ -0.22
FN1-207ENST00000421182 TOMM22Q9NS69 142 aa13.7□□□□□ -0.22
FN1-207ENST00000421182 ITSN2Q9NZM3 1697 aa13.69□□□□□ -0.22
FN1-207ENST00000421182 L3MBTL2Q969R5 705 aa13.69□□□□□ -0.22
FN1-207ENST00000421182 E9PSI1 815 aa13.69□□□□□ -0.22
FN1-207ENST00000421182 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
FN1-207ENST00000421182 NUTM2FA1L443 756 aa13.69□□□□□ -0.22
FN1-207ENST00000421182 PBRM1Q86U86 1689 aa13.69□□□□□ -0.22
FN1-207ENST00000421182 RAPGEF4Q8WZA2 1011 aa13.68□□□□□ -0.22
FN1-207ENST00000421182 CWC22Q9HCG8 908 aaKnown RBP13.68□□□□□ -0.22
FN1-207ENST00000421182 SF3A1Q15459 793 aaKnown RBP13.68□□□□□ -0.22
FN1-207ENST00000421182 NAP1L5Q96NT1 182 aaPredicted RBP13.67□□□□□ -0.22
FN1-207ENST00000421182 EHBP1L1Q8N3D4 1523 aa13.67□□□□□ -0.22
FN1-207ENST00000421182 H3BQV1 296 aa13.67□□□□□ -0.22
FN1-207ENST00000421182 IFFO2Q5TF58 517 aa13.67□□□□□ -0.22
FN1-207ENST00000421182 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
FN1-207ENST00000421182 HOOK1Q9UJC3 728 aaKnown RBP13.67□□□□□ -0.22
FN1-207ENST00000421182 RBM33Q96EV2 1170 aaKnown RBP13.67□□□□□ -0.22
FN1-207ENST00000421182 SF3B2Q13435 895 aaKnown RBP13.67□□□□□ -0.22
FN1-207ENST00000421182 USP47Q96K76 1375 aa13.67□□□□□ -0.22
FN1-207ENST00000421182 SYTL4Q96C24 671 aaPredicted RBP13.66□□□□□ -0.22
FN1-207ENST00000421182 TPM1P09493 284 aa13.66□□□□□ -0.22
FN1-207ENST00000421182 TPM3P06753 285 aa13.66□□□□□ -0.22
FN1-207ENST00000421182 CCDC47Q96A33 483 aaKnown RBP13.66□□□□□ -0.22
FN1-207ENST00000421182 TRDNQ13061 729 aa13.65□□□□□ -0.22
FN1-207ENST00000421182 KRI1Q8N9T8 703 aaKnown RBP13.65□□□□□ -0.22
FN1-207ENST00000421182 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
FN1-207ENST00000421182 TRIM29Q14134 588 aa13.65□□□□□ -0.22
FN1-207ENST00000421182 TPD52L1Q16890 204 aaPredicted RBP13.65□□□□□ -0.22
FN1-207ENST00000421182 GOLGA6L1Q8N7Z2 621 aa13.65□□□□□ -0.22
FN1-207ENST00000421182 HSP90AB4PQ58FF6 505 aa13.65□□□□□ -0.22
FN1-207ENST00000421182 RNF20Q5VTR2 975 aa13.64□□□□□ -0.23
FN1-207ENST00000421182 POLA1P09884 1462 aaPredicted RBP13.64□□□□□ -0.23
FN1-207ENST00000421182 ERICH2A1L162 156 aa13.64□□□□□ -0.23
FN1-207ENST00000421182 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
FN1-207ENST00000421182 DIAPH1O60610 1272 aaKnown RBP13.64□□□□□ -0.23
FN1-207ENST00000421182 DIAPH3Q9NSV4 1193 aa13.63□□□□□ -0.23
FN1-207ENST00000421182 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
FN1-207ENST00000421182 THEMISQ8N1K5 641 aaPredicted RBP13.63□□□□□ -0.23
FN1-207ENST00000421182 REC8O95072 547 aa13.62□□□□□ -0.23
FN1-207ENST00000421182 ZKSCAN2Q63HK3 967 aa13.62□□□□□ -0.23
FN1-207ENST00000421182 PANK3Q9H999 370 aa13.62□□□□□ -0.23
FN1-207ENST00000421182 ZKSCAN1P17029 563 aaPredicted RBP13.62□□□□□ -0.23
FN1-207ENST00000421182 CASKIN1Q8WXD9 1431 aa13.62□□□□□ -0.23
FN1-207ENST00000421182 AAMPQ13685 434 aa13.62□□□□□ -0.23
FN1-207ENST00000421182 CCDC43Q96MW1 224 aaKnown RBP13.61□□□□□ -0.23
FN1-207ENST00000421182 ANKRD20A12PQ8NF67 263 aa13.61□□□□□ -0.23
FN1-207ENST00000421182 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
FN1-207ENST00000421182 API5Q9BZZ5 524 aaKnown RBP13.6□□□□□ -0.23
FN1-207ENST00000421182 CCDC146Q8IYE0 955 aa13.6□□□□□ -0.23
FN1-207ENST00000421182 DDX19BQ9UMR2 479 aa13.6□□□□□ -0.23
FN1-207ENST00000421182 EPRSP07814 1512 aaKnown RBP13.6□□□□□ -0.23
FN1-207ENST00000421182 MFAP1P55081 439 aaKnown RBP13.6□□□□□ -0.23
FN1-207ENST00000421182 G3BP1Q13283 466 aaKnown RBP eCLIP13.6□□□□□ -0.232e-53■□□□□ 8.6
FN1-207ENST00000421182 FGD6Q6ZV73 1430 aa13.59□□□□□ -0.23
FN1-207ENST00000421182 IGF1RP08069 1367 aa13.59□□□□□ -0.23
FN1-207ENST00000421182 IFIT2P09913 472 aaKnown RBP13.59□□□□□ -0.23
FN1-207ENST00000421182 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
FN1-207ENST00000421182 CCDC70Q6NSX1 233 aa13.59□□□□□ -0.23
FN1-207ENST00000421182 KIF6Q6ZMV9 814 aa13.59□□□□□ -0.23
FN1-207ENST00000421182 ERC2O15083 957 aa13.58□□□□□ -0.23
FN1-207ENST00000421182 RILPL2Q969X0 211 aa13.58□□□□□ -0.24
FN1-207ENST00000421182 APPP05067 770 aa13.58□□□□□ -0.24
FN1-207ENST00000421182 ANKRD50Q9ULJ7 1429 aa13.57□□□□□ -0.24
FN1-207ENST00000421182 CNKSR2Q8WXI2 1034 aa13.57□□□□□ -0.24
FN1-207ENST00000421182 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
FN1-207ENST00000421182 DDX11L8A8MPP1 907 aa13.57□□□□□ -0.24
FN1-207ENST00000421182 GNAI1P63096 354 aa13.57□□□□□ -0.24
FN1-207ENST00000421182 LRRC9Q6ZRR7 1453 aa13.57□□□□□ -0.24
FN1-207ENST00000421182 GOLGA6L19H0YKK7 550 aa13.57□□□□□ -0.24
FN1-207ENST00000421182 BIVM-ERCC5R4GMW8 1640 aa13.56□□□□□ -0.24
FN1-207ENST00000421182 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
FN1-207ENST00000421182 CPLX1O14810 134 aa13.55□□□□□ -0.24
FN1-207ENST00000421182 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
FN1-207ENST00000421182 FBXW7Q969H0 707 aa13.55□□□□□ -0.24
FN1-207ENST00000421182 BRMS1Q9HCU9 246 aa13.55□□□□□ -0.24
FN1-207ENST00000421182 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
FN1-207ENST00000421182 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
FN1-207ENST00000421182 RUNDC1Q96C34 613 aa13.55□□□□□ -0.24
FN1-207ENST00000421182 HFM1A2PYH4 1435 aa13.55□□□□□ -0.24
FN1-207ENST00000421182 XBP1P17861 261 aa13.55□□□□□ -0.24
FN1-207ENST00000421182 ANKRD45Q5TZF3 282 aa13.54□□□□□ -0.24
FN1-207ENST00000421182 IPO7O95373 1038 aaKnown RBP13.54□□□□□ -0.24
FN1-207ENST00000421182 GAS2L2Q8NHY3 880 aa13.54□□□□□ -0.24
FN1-207ENST00000421182 PES1O00541 588 aaKnown RBP13.54□□□□□ -0.24
FN1-207ENST00000421182 SAFBQ15424 915 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms