RNA–Protein interactions for RNA: ENST00000420881.6

PCDH19-203, Transcript of protocadherin 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH19, Length 7,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19-203ENST00000420881 LRRCC1Q9C099 1032 aa11.16□□□□□ -0.62
PCDH19-203ENST00000420881 GBP2P32456 591 aaPredicted RBP11.16□□□□□ -0.62
PCDH19-203ENST00000420881 FOXD4L6Q3SYB3 417 aaPredicted RBP11.16□□□□□ -0.62
PCDH19-203ENST00000420881 FOXD4L3Q6VB84 417 aaPredicted RBP11.16□□□□□ -0.62
PCDH19-203ENST00000420881 LUC7LQ9NQ29 371 aaKnown RBP11.16□□□□□ -0.62
PCDH19-203ENST00000420881 GOLGA6L10A0A0M3HER8 536 aa11.16□□□□□ -0.62
PCDH19-203ENST00000420881 WWC1Q8IX03 1113 aa11.16□□□□□ -0.62
PCDH19-203ENST00000420881 GPATCH11Q8N954 259 aa11.16□□□□□ -0.62
PCDH19-203ENST00000420881 CFAP57Q96MR6 1250 aa11.15□□□□□ -0.62
PCDH19-203ENST00000420881 ZKSCAN1P17029 563 aaPredicted RBP11.15□□□□□ -0.62
PCDH19-203ENST00000420881 PABPN1Q86U42 306 aaKnown RBP eCLIP11.15□□□□□ -0.62
PCDH19-203ENST00000420881 AEBP1Q8IUX7 1158 aa11.15□□□□□ -0.63
PCDH19-203ENST00000420881 PDILTQ8N807 584 aa11.15□□□□□ -0.63
PCDH19-203ENST00000420881 SHTN1A0MZ66 631 aa11.14□□□□□ -0.63
PCDH19-203ENST00000420881 PPM1EQ8WY54 764 aa11.14□□□□□ -0.63
PCDH19-203ENST00000420881 SEPT11Q9NVA2 429 aaKnown RBP11.14□□□□□ -0.63
PCDH19-203ENST00000420881 MBD3O95983 291 aa11.14□□□□□ -0.63
PCDH19-203ENST00000420881 CCAR1Q8IX12 1150 aaKnown RBP11.14□□□□□ -0.63
PCDH19-203ENST00000420881 CCDC112Q8NEF3 446 aa11.14□□□□□ -0.63
PCDH19-203ENST00000420881 SKIDA1Q1XH10 827 aa11.14□□□□□ -0.63
PCDH19-203ENST00000420881 GOLGA3Q08378 1498 aa11.14□□□□□ -0.63
PCDH19-203ENST00000420881 NFKBIBQ15653 356 aa11.14□□□□□ -0.63
PCDH19-203ENST00000420881 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
PCDH19-203ENST00000420881 TRIM5Q9C035 493 aa11.14□□□□□ -0.63
PCDH19-203ENST00000420881 ERICH4A6NGS2 130 aa11.13□□□□□ -0.63
PCDH19-203ENST00000420881 FILIP1LQ4L180 1135 aa11.13□□□□□ -0.63
PCDH19-203ENST00000420881 MICALCLQ6ZW33 695 aa11.13□□□□□ -0.63
PCDH19-203ENST00000420881 UBE2Q2Q8WVN8 375 aa11.13□□□□□ -0.63
PCDH19-203ENST00000420881 SSR1P43307 286 aaKnown RBP11.13□□□□□ -0.63
PCDH19-203ENST00000420881 CHMP3Q9Y3E7 222 aa11.13□□□□□ -0.63
PCDH19-203ENST00000420881 BCCIPQ9P287 314 aaKnown RBP eCLIP11.13□□□□□ -0.63
PCDH19-203ENST00000420881 TOMM22Q9NS69 142 aa11.13□□□□□ -0.63
PCDH19-203ENST00000420881 ZCCHC6Q5VYS8 1495 aaKnown RBP11.12□□□□□ -0.63
PCDH19-203ENST00000420881 TSPY26PQ9H489 355 aa11.12□□□□□ -0.63
PCDH19-203ENST00000420881 CCDC91Q7Z6B0 441 aa11.12□□□□□ -0.63
PCDH19-203ENST00000420881 ZFYVE27Q5T4F4 411 aa11.12□□□□□ -0.63
PCDH19-203ENST00000420881 IRX3P78415 501 aaPredicted RBP11.12□□□□□ -0.63
PCDH19-203ENST00000420881 RILPL2Q969X0 211 aa11.12□□□□□ -0.63
PCDH19-203ENST00000420881 DNAJC2Q99543 621 aaKnown RBP11.12□□□□□ -0.63
PCDH19-203ENST00000420881 ANKRD62A6NC57 917 aa11.12□□□□□ -0.63
PCDH19-203ENST00000420881 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
PCDH19-203ENST00000420881 CEP63Q96MT8 703 aa11.12□□□□□ -0.63
PCDH19-203ENST00000420881 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
PCDH19-203ENST00000420881 SMC3Q9UQE7 1217 aa11.11□□□□□ -0.63
PCDH19-203ENST00000420881 POLR3GO15318 223 aaPredicted RBP11.11□□□□□ -0.63
PCDH19-203ENST00000420881 PDCL3Q9H2J4 239 aa11.11□□□□□ -0.63
PCDH19-203ENST00000420881 CPLX1O14810 134 aa11.11□□□□□ -0.63
PCDH19-203ENST00000420881 MAPK8IP2Q13387 824 aaPredicted RBP11.11□□□□□ -0.63
PCDH19-203ENST00000420881 LUZP1Q86V48 1076 aa11.11□□□□□ -0.63
PCDH19-203ENST00000420881 MCM3P25205 808 aa11.1□□□□□ -0.63
PCDH19-203ENST00000420881 SLC4A3P48751 1232 aa11.1□□□□□ -0.63
PCDH19-203ENST00000420881 SAFBQ15424 915 aaKnown RBP eCLIP11.1□□□□□ -0.63
PCDH19-203ENST00000420881 TTLL5Q6EMB2 1281 aa11.1□□□□□ -0.63
PCDH19-203ENST00000420881 GBP3Q9H0R5 595 aa11.1□□□□□ -0.63
PCDH19-203ENST00000420881 ZNHIT6Q9NWK9 470 aaKnown RBP11.1□□□□□ -0.63
PCDH19-203ENST00000420881 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.1□□□□□ -0.63
PCDH19-203ENST00000420881 TRAK2O60296 914 aa11.1□□□□□ -0.63
PCDH19-203ENST00000420881 PIP4K2AP48426 406 aaPredicted RBP11.1□□□□□ -0.63
PCDH19-203ENST00000420881 HMGB1P09429 215 aaKnown RBP11.1□□□□□ -0.63
PCDH19-203ENST00000420881 AMOTL1Q8IY63 956 aa11.1□□□□□ -0.63
PCDH19-203ENST00000420881 CNKSR2Q8WXI2 1034 aa11.1□□□□□ -0.63
PCDH19-203ENST00000420881 CCDC181Q5TID7 509 aa11.09□□□□□ -0.63
PCDH19-203ENST00000420881 GTF2A1P52655 376 aaPredicted RBP11.09□□□□□ -0.63
PCDH19-203ENST00000420881 MAP9Q49MG5 647 aa11.09□□□□□ -0.63
PCDH19-203ENST00000420881 ANKRD45Q5TZF3 282 aa11.09□□□□□ -0.63
PCDH19-203ENST00000420881 STAMBPO95630 424 aa11.09□□□□□ -0.63
PCDH19-203ENST00000420881 SETSIPP0DME0 302 aa11.09□□□□□ -0.63
PCDH19-203ENST00000420881 LMOD2Q6P5Q4 547 aa11.09□□□□□ -0.63
PCDH19-203ENST00000420881 FEZ1Q99689 392 aa11.09□□□□□ -0.63
PCDH19-203ENST00000420881 MAP2K1Q02750 393 aaPredicted RBP11.09□□□□□ -0.63
PCDH19-203ENST00000420881 CEP162Q5TB80 1403 aa11.09□□□□□ -0.63
PCDH19-203ENST00000420881 SMC2O95347 1197 aa11.08□□□□□ -0.64
PCDH19-203ENST00000420881 BCL11BQ9C0K0 894 aaPredicted RBP11.08□□□□□ -0.64
PCDH19-203ENST00000420881 CCDC43Q96MW1 224 aaKnown RBP11.08□□□□□ -0.64
PCDH19-203ENST00000420881 U2AF1L5P0DN76 240 aaPredicted RBP11.08□□□□□ -0.64
PCDH19-203ENST00000420881 U2AF1Q01081 240 aaKnown RBP eCLIP11.08□□□□□ -0.64
PCDH19-203ENST00000420881 MAGEC2Q9UBF1 373 aaPredicted RBP11.08□□□□□ -0.64
PCDH19-203ENST00000420881 TMCO3Q6UWJ1 677 aa11.08□□□□□ -0.64
PCDH19-203ENST00000420881 TAX1BP1Q86VP1 789 aa11.08□□□□□ -0.64
PCDH19-203ENST00000420881 KINO60870 393 aaKnown RBP11.07□□□□□ -0.64
PCDH19-203ENST00000420881 ROCK1Q13464 1354 aa11.07□□□□□ -0.64
PCDH19-203ENST00000420881 SDF4Q9BRK5 362 aa11.07□□□□□ -0.64
PCDH19-203ENST00000420881 ROCK2O75116 1388 aaKnown RBP11.07□□□□□ -0.64
PCDH19-203ENST00000420881 TXLNAP40222 546 aa11.07□□□□□ -0.64
PCDH19-203ENST00000420881 TRDNQ13061 729 aa11.07□□□□□ -0.64
PCDH19-203ENST00000420881 HDGFL2Q7Z4V5 671 aaPredicted RBP11.07□□□□□ -0.64
PCDH19-203ENST00000420881 KIAA1328Q86T90 577 aa11.07□□□□□ -0.64
PCDH19-203ENST00000420881 KIF2AO00139 706 aaPredicted RBP11.07□□□□□ -0.64
PCDH19-203ENST00000420881 SYCP1Q15431 976 aa11.07□□□□□ -0.64
PCDH19-203ENST00000420881 INTS3Q68E01 1043 aaKnown RBP11.07□□□□□ -0.64
PCDH19-203ENST00000420881 IPO4Q8TEX9 1081 aaKnown RBP11.07□□□□□ -0.64
PCDH19-203ENST00000420881 CCDC102AQ96A19 550 aa11.07□□□□□ -0.64
PCDH19-203ENST00000420881 SRPK2P78362 688 aaKnown RBP11.06□□□□□ -0.64
PCDH19-203ENST00000420881 BRMS1Q9HCU9 246 aa11.06□□□□□ -0.64
PCDH19-203ENST00000420881 ANO2Q9NQ90 1003 aa11.06□□□□□ -0.64
PCDH19-203ENST00000420881 SEPT6Q14141 434 aa11.06□□□□□ -0.64
PCDH19-203ENST00000420881 TIGD1Q96MW7 591 aa11.06□□□□□ -0.64
PCDH19-203ENST00000420881 CFAP45Q9UL16 551 aa11.06□□□□□ -0.64
PCDH19-203ENST00000420881 VPS37CA5D8V6 355 aaPredicted RBP11.06□□□□□ -0.64
PCDH19-203ENST00000420881 G3V3G9 751 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms