RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
CHMP5-202ENST00000419016 HSPA5P11021 654 aaKnown RBP19.53■□□□□ 0.72
CHMP5-202ENST00000419016 NBPF1Q3BBV0 1214 aa19.53■□□□□ 0.72
CHMP5-202ENST00000419016 MYO5BQ9ULV0 1848 aa19.52■□□□□ 0.72
CHMP5-202ENST00000419016 ROCK2O75116 1388 aaKnown RBP19.52■□□□□ 0.71
CHMP5-202ENST00000419016 NLRP1Q9C000 1473 aa19.51■□□□□ 0.71
CHMP5-202ENST00000419016 KDM5AP29375 1690 aaKnown RBP19.51■□□□□ 0.71
CHMP5-202ENST00000419016 RIMS1Q86UR5 1692 aaKnown RBP19.51■□□□□ 0.71
CHMP5-202ENST00000419016 LAMC1P11047 1609 aa19.5■□□□□ 0.71
CHMP5-202ENST00000419016 PIK3C2GO75747 1445 aa19.5■□□□□ 0.71
CHMP5-202ENST00000419016 KIAA1210Q9ULL0 1709 aa19.5■□□□□ 0.71
CHMP5-202ENST00000419016 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
CHMP5-202ENST00000419016 CARD11Q9BXL7 1154 aa19.5■□□□□ 0.71
CHMP5-202ENST00000419016 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
CHMP5-202ENST00000419016 USP47Q96K76 1375 aa19.49■□□□□ 0.71
CHMP5-202ENST00000419016 STAG3Q9UJ98 1225 aa19.47■□□□□ 0.71
CHMP5-202ENST00000419016 UBR1Q8IWV7 1749 aa19.45■□□□□ 0.7
CHMP5-202ENST00000419016 CFAP70Q5T0N1 1121 aa19.45■□□□□ 0.7
CHMP5-202ENST00000419016 C14orf93Q9H972 538 aaKnown RBP19.45■□□□□ 0.7
CHMP5-202ENST00000419016 RIMS2Q9UQ26 1411 aa19.44■□□□□ 0.7
CHMP5-202ENST00000419016 NUTM2DQ5VT03 806 aaPredicted RBP19.43■□□□□ 0.7
CHMP5-202ENST00000419016 SETBP1Q9Y6X0 1596 aa19.41■□□□□ 0.7
CHMP5-202ENST00000419016 TMEM2Q9UHN6 1383 aa19.41■□□□□ 0.7
CHMP5-202ENST00000419016 PTPRMP28827 1452 aa19.41■□□□□ 0.7
CHMP5-202ENST00000419016 MYO3AQ8NEV4 1616 aa19.4■□□□□ 0.7
CHMP5-202ENST00000419016 PLPPR3Q6T4P5 718 aa19.4■□□□□ 0.7
CHMP5-202ENST00000419016 ADGRB1O14514 1584 aa19.4■□□□□ 0.7
CHMP5-202ENST00000419016 ST20-MTHFSA0A0A6YYL1 179 aa19.39■□□□□ 0.69
CHMP5-202ENST00000419016 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.39■□□□□ 0.69
CHMP5-202ENST00000419016 IQGAP1P46940 1657 aa19.39■□□□□ 0.69
CHMP5-202ENST00000419016 SCAF11Q99590 1463 aaKnown RBP19.38■□□□□ 0.69
CHMP5-202ENST00000419016 C11orf95C9JLR9 678 aaPredicted RBP19.38■□□□□ 0.69
CHMP5-202ENST00000419016 DIEXFQ68CQ4 756 aaKnown RBP19.38■□□□□ 0.69
CHMP5-202ENST00000419016 ARHGAP23Q9P227 1491 aa19.38■□□□□ 0.69
CHMP5-202ENST00000419016 SLIT1O75093 1534 aa19.37■□□□□ 0.69
CHMP5-202ENST00000419016 WASHC2AQ641Q2 1341 aa19.36■□□□□ 0.69
CHMP5-202ENST00000419016 SETD1BQ9UPS6 1966 aaKnown RBP19.36■□□□□ 0.69
CHMP5-202ENST00000419016 HDGFP51858 240 aaKnown RBP19.35■□□□□ 0.69
CHMP5-202ENST00000419016 CEP170BQ9Y4F5 1589 aaPredicted RBP19.35■□□□□ 0.69
CHMP5-202ENST00000419016 THEMISQ8N1K5 641 aaPredicted RBP19.35■□□□□ 0.69
CHMP5-202ENST00000419016 TESK2Q96S53 571 aa19.33■□□□□ 0.69
CHMP5-202ENST00000419016 ALKQ9UM73 1620 aa19.33■□□□□ 0.69
CHMP5-202ENST00000419016 LTKP29376 864 aa19.33■□□□□ 0.68
CHMP5-202ENST00000419016 ASXL1Q8IXJ9 1541 aa19.33■□□□□ 0.68
CHMP5-202ENST00000419016 ZNF142P52746 1687 aaPredicted RBP19.33■□□□□ 0.68
CHMP5-202ENST00000419016 CCDC7Q96M83 1385 aa19.32■□□□□ 0.68
CHMP5-202ENST00000419016 NRXN3Q9Y4C0 1643 aa19.32■□□□□ 0.68
CHMP5-202ENST00000419016 TMEM132EQ6IEE7 984 aa19.32■□□□□ 0.68
CHMP5-202ENST00000419016 KDM4FA0A1W2PPD8 638 aa19.3■□□□□ 0.68
CHMP5-202ENST00000419016 KIF7Q2M1P5 1343 aa19.3■□□□□ 0.68
CHMP5-202ENST00000419016 SETD1AO15047 1707 aaKnown RBP19.3■□□□□ 0.68
CHMP5-202ENST00000419016 POLR1AO95602 1720 aaPredicted RBP19.29■□□□□ 0.68
CHMP5-202ENST00000419016 PLEKHG1Q9ULL1 1385 aa19.29■□□□□ 0.68
CHMP5-202ENST00000419016 TXNDC2Q86VQ3 553 aa19.28■□□□□ 0.68
CHMP5-202ENST00000419016 EIF3AQ14152 1382 aaKnown RBP19.28■□□□□ 0.68
CHMP5-202ENST00000419016 DDX10Q13206 875 aaKnown RBP19.28■□□□□ 0.68
CHMP5-202ENST00000419016 EID1Q9Y6B2 187 aa19.26■□□□□ 0.67
CHMP5-202ENST00000419016 MED14O60244 1454 aa19.26■□□□□ 0.67
CHMP5-202ENST00000419016 ADAMTS13Q76LX8 1427 aa19.26■□□□□ 0.67
CHMP5-202ENST00000419016 SENP3Q9H4L4 574 aaPredicted RBP19.25■□□□□ 0.67
CHMP5-202ENST00000419016 YTHDC2Q9H6S0 1430 aaKnown RBP19.25■□□□□ 0.67
CHMP5-202ENST00000419016 TRAK1Q9UPV9 953 aa19.24■□□□□ 0.67
CHMP5-202ENST00000419016 SBNO2Q9Y2G9 1366 aa19.24■□□□□ 0.67
CHMP5-202ENST00000419016 METP08581 1390 aa19.23■□□□□ 0.67
CHMP5-202ENST00000419016 DISP3Q9P2K9 1392 aa19.22■□□□□ 0.67
CHMP5-202ENST00000419016 LRPPRCP42704 1394 aaKnown RBP19.22■□□□□ 0.67
CHMP5-202ENST00000419016 CENPJQ9HC77 1338 aaPredicted RBP19.21■□□□□ 0.67
CHMP5-202ENST00000419016 ARHGEF28Q8N1W1 1705 aaKnown RBP19.21■□□□□ 0.67
CHMP5-202ENST00000419016 TMF1P82094 1093 aa19.21■□□□□ 0.67
CHMP5-202ENST00000419016 ABCC11Q96J66 1382 aa19.2■□□□□ 0.66
CHMP5-202ENST00000419016 SLC24A1O60721 1099 aa19.19■□□□□ 0.66
CHMP5-202ENST00000419016 TBX22Q9Y458 520 aa19.19■□□□□ 0.66
CHMP5-202ENST00000419016 DLC1Q96QB1 1528 aa19.18■□□□□ 0.66
CHMP5-202ENST00000419016 ANKLE2Q86XL3 938 aa19.18■□□□□ 0.66
CHMP5-202ENST00000419016 STK26Q9P289 416 aa19.18■□□□□ 0.66
CHMP5-202ENST00000419016 TECPR2O15040 1411 aa19.17■□□□□ 0.66
CHMP5-202ENST00000419016 DIP2AQ14689 1571 aa19.16■□□□□ 0.66
CHMP5-202ENST00000419016 SIRT1Q96EB6 747 aa19.15■□□□□ 0.66
CHMP5-202ENST00000419016 QRICH2Q9H0J4 1663 aa19.15■□□□□ 0.66
CHMP5-202ENST00000419016 BCANQ96GW7 911 aa19.15■□□□□ 0.66
CHMP5-202ENST00000419016 SLC26A8Q96RN1 970 aa19.15■□□□□ 0.66
CHMP5-202ENST00000419016 MIER1Q8N108 512 aa19.13■□□□□ 0.65
CHMP5-202ENST00000419016 PRAM1Q96QH2 718 aa19.13■□□□□ 0.65
CHMP5-202ENST00000419016 KNDC1Q76NI1 1749 aa19.12■□□□□ 0.65
CHMP5-202ENST00000419016 CDCA8Q53HL2 280 aa19.12■□□□□ 0.65
CHMP5-202ENST00000419016 PTPRUQ92729 1446 aa19.12■□□□□ 0.65
CHMP5-202ENST00000419016 FAM135BQ49AJ0 1406 aa19.11■□□□□ 0.65
CHMP5-202ENST00000419016 CPS1P31327 1500 aa19.11■□□□□ 0.65
CHMP5-202ENST00000419016 POLR3GLQ9BT43 218 aa19.1■□□□□ 0.65
CHMP5-202ENST00000419016 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
CHMP5-202ENST00000419016 PUS7Q96PZ0 661 aaKnown RBP19.09■□□□□ 0.65
CHMP5-202ENST00000419016 TULP4Q9NRJ4 1543 aa19.09■□□□□ 0.65
CHMP5-202ENST00000419016 PLEKHH1Q9ULM0 1364 aa19.08■□□□□ 0.65
CHMP5-202ENST00000419016 POGKQ9P215 609 aa19.08■□□□□ 0.65
CHMP5-202ENST00000419016 NPHP4O75161 1426 aaPredicted RBP19.08■□□□□ 0.64
CHMP5-202ENST00000419016 WAPLQ7Z5K2 1190 aa19.08■□□□□ 0.64
CHMP5-202ENST00000419016 ROBO2Q9HCK4 1378 aa19.07■□□□□ 0.64
CHMP5-202ENST00000419016 LMTK3Q96Q04 1460 aa19.07■□□□□ 0.64
CHMP5-202ENST00000419016 NCKAP5LQ9HCH0 1330 aa19.06■□□□□ 0.64
CHMP5-202ENST00000419016 SAFB2Q14151 953 aaKnown RBP eCLIP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms