RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 ITPRIPQ8IWB1 547 aa14.77□□□□□ -0.04
DDR1-232ENST00000418800 TBC1D2Q9BYX2 928 aa14.77□□□□□ -0.04
DDR1-232ENST00000418800 GRPEL1Q9HAV7 217 aa14.77□□□□□ -0.04
DDR1-232ENST00000418800 R3HCC1Q9Y3T6 440 aaKnown RBP14.77□□□□□ -0.04
DDR1-232ENST00000418800 TEX14Q8IWB6 1497 aa14.77□□□□□ -0.05
DDR1-232ENST00000418800 PER1O15534 1290 aaPredicted RBP14.77□□□□□ -0.05
DDR1-232ENST00000418800 MRE11P49959 708 aa14.77□□□□□ -0.05
DDR1-232ENST00000418800 DNTTIP2Q5QJE6 756 aaKnown RBP14.77□□□□□ -0.05
DDR1-232ENST00000418800 PLEKHH1Q9ULM0 1364 aa14.76□□□□□ -0.05
DDR1-232ENST00000418800 CCDC144AA2RUR9 1427 aa14.76□□□□□ -0.05
DDR1-232ENST00000418800 SLFN5Q08AF3 891 aa14.76□□□□□ -0.05
DDR1-232ENST00000418800 NUTM2DQ5VT03 806 aaPredicted RBP14.76□□□□□ -0.05
DDR1-232ENST00000418800 MORC1Q86VD1 984 aa14.76□□□□□ -0.05
DDR1-232ENST00000418800 DMRT2Q9Y5R5 561 aa14.76□□□□□ -0.05
DDR1-232ENST00000418800 DISP3Q9P2K9 1392 aa14.75□□□□□ -0.05
DDR1-232ENST00000418800 RWDD1Q9H446 243 aaPredicted RBP14.75□□□□□ -0.05
DDR1-232ENST00000418800 MAGI3Q5TCQ9 1506 aa14.75□□□□□ -0.05
DDR1-232ENST00000418800 E9PSI1 815 aa14.74□□□□□ -0.05
DDR1-232ENST00000418800 U2AF1L5P0DN76 240 aaPredicted RBP14.74□□□□□ -0.05
DDR1-232ENST00000418800 U2AF1Q01081 240 aaKnown RBP eCLIP14.74□□□□□ -0.05
DDR1-232ENST00000418800 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
DDR1-232ENST00000418800 UGGT2Q9NYU1 1516 aa14.74□□□□□ -0.05
DDR1-232ENST00000418800 MAPK8IP3Q9UPT6 1336 aa14.74□□□□□ -0.05
DDR1-232ENST00000418800 APBB1O00213 710 aa14.73□□□□□ -0.05
DDR1-232ENST00000418800 CGNL1Q0VF96 1302 aa14.73□□□□□ -0.05
DDR1-232ENST00000418800 FOXD4L5Q5VV16 416 aaPredicted RBP14.73□□□□□ -0.05
DDR1-232ENST00000418800 FOXD4L4Q8WXT5 416 aaPredicted RBP14.73□□□□□ -0.05
DDR1-232ENST00000418800 C22orf23Q9BZE7 217 aa14.73□□□□□ -0.05
DDR1-232ENST00000418800 CDCA8Q53HL2 280 aa14.72□□□□□ -0.05
DDR1-232ENST00000418800 PMFBP1Q8TBY8 1022 aa14.72□□□□□ -0.05
DDR1-232ENST00000418800 CHMP5Q9NZZ3 219 aa14.72□□□□□ -0.05
DDR1-232ENST00000418800 ZHX1Q9UKY1 873 aaPredicted RBP14.72□□□□□ -0.05
DDR1-232ENST00000418800 SMC4Q9NTJ3 1288 aa14.72□□□□□ -0.05
DDR1-232ENST00000418800 DISP1Q96F81 1524 aa14.71□□□□□ -0.05
DDR1-232ENST00000418800 PTMAP06454 111 aaKnown RBP14.71□□□□□ -0.05
DDR1-232ENST00000418800 AFAP1Q8N556 730 aa14.71□□□□□ -0.05
DDR1-232ENST00000418800 MPNDQ8N594 471 aa14.71□□□□□ -0.05
DDR1-232ENST00000418800 PTPRGP23470 1445 aa14.7□□□□□ -0.06
DDR1-232ENST00000418800 LNPKQ9C0E8 428 aa14.7□□□□□ -0.06
DDR1-232ENST00000418800 PCDHB15Q9Y5E8 787 aa14.7□□□□□ -0.06
DDR1-232ENST00000418800 KIAA0556O60303 1618 aa14.69□□□□□ -0.06
DDR1-232ENST00000418800 GOLGA6L22H0YM25 854 aa14.69□□□□□ -0.06
DDR1-232ENST00000418800 ELL2O00472 640 aaPredicted RBP14.69□□□□□ -0.06
DDR1-232ENST00000418800 PARD3Q8TEW0 1356 aa14.68□□□□□ -0.06
DDR1-232ENST00000418800 TSR2Q969E8 191 aaKnown RBP14.68□□□□□ -0.06
DDR1-232ENST00000418800 DDX49Q9Y6V7 483 aaKnown RBP14.68□□□□□ -0.06
DDR1-232ENST00000418800 ROCK1Q13464 1354 aa14.67□□□□□ -0.06
DDR1-232ENST00000418800 CYB5RLQ6IPT4 315 aa14.67□□□□□ -0.06
DDR1-232ENST00000418800 TCP11L2Q8N4U5 519 aa14.67□□□□□ -0.06
DDR1-232ENST00000418800 BCORL1Q5H9F3 1711 aa14.67□□□□□ -0.06
DDR1-232ENST00000418800 DDX11L8A8MPP1 907 aa14.67□□□□□ -0.06
DDR1-232ENST00000418800 RLBP1P12271 317 aa14.67□□□□□ -0.06
DDR1-232ENST00000418800 FOXD4L6Q3SYB3 417 aaPredicted RBP14.67□□□□□ -0.06
DDR1-232ENST00000418800 FOXD4L3Q6VB84 417 aaPredicted RBP14.67□□□□□ -0.06
DDR1-232ENST00000418800 GBP4Q96PP9 640 aa14.67□□□□□ -0.06
DDR1-232ENST00000418800 TRAK1Q9UPV9 953 aa14.67□□□□□ -0.06
DDR1-232ENST00000418800 NASPP49321 788 aaPredicted RBP14.65□□□□□ -0.06
DDR1-232ENST00000418800 TESK2Q96S53 571 aa14.65□□□□□ -0.06
DDR1-232ENST00000418800 ERBB4Q15303 1308 aa14.65□□□□□ -0.06
DDR1-232ENST00000418800 PZPP20742 1482 aa14.65□□□□□ -0.06
DDR1-232ENST00000418800 ARHGEF11O15085 1522 aa14.65□□□□□ -0.06
DDR1-232ENST00000418800 PLCB2Q00722 1185 aa14.65□□□□□ -0.06
DDR1-232ENST00000418800 PDCL3Q9H2J4 239 aa14.65□□□□□ -0.06
DDR1-232ENST00000418800 CARMIL2Q6F5E8 1435 aa14.64□□□□□ -0.07
DDR1-232ENST00000418800 WWC1Q8IX03 1113 aa14.64□□□□□ -0.07
DDR1-232ENST00000418800 TPM2P07951 284 aa14.64□□□□□ -0.07
DDR1-232ENST00000418800 CFAP53Q96M91 514 aa14.64□□□□□ -0.07
DDR1-232ENST00000418800 LRRIQ1Q96JM4 1722 aa14.64□□□□□ -0.07
DDR1-232ENST00000418800 ERBINQ96RT1 1412 aa14.63□□□□□ -0.07
DDR1-232ENST00000418800 XPCQ01831 940 aaPredicted RBP14.63□□□□□ -0.07
DDR1-232ENST00000418800 MLECQ14165 292 aa14.63□□□□□ -0.07
DDR1-232ENST00000418800 HECW1Q76N89 1606 aa14.63□□□□□ -0.07
DDR1-232ENST00000418800 CFAP70Q5T0N1 1121 aa14.62□□□□□ -0.07
DDR1-232ENST00000418800 ANKRD45Q5TZF3 282 aa14.62□□□□□ -0.07
DDR1-232ENST00000418800 GGT6Q6P531 493 aa14.62□□□□□ -0.07
DDR1-232ENST00000418800 CLASP1Q7Z460 1538 aa14.62□□□□□ -0.07
DDR1-232ENST00000418800 PDE3AQ14432 1141 aa14.62□□□□□ -0.07
DDR1-232ENST00000418800 NOL8Q76FK4 1167 aaKnown RBP14.61□□□□□ -0.07
DDR1-232ENST00000418800 DZIP1LQ8IYY4 767 aaKnown RBP14.61□□□□□ -0.07
DDR1-232ENST00000418800 C1orf115Q9H7X2 142 aa14.61□□□□□ -0.07
DDR1-232ENST00000418800 TBC1D32Q96NH3 1257 aa14.61□□□□□ -0.07
DDR1-232ENST00000418800 SHROOM2Q13796 1616 aa14.61□□□□□ -0.07
DDR1-232ENST00000418800 ZKSCAN2Q63HK3 967 aa14.6□□□□□ -0.07
DDR1-232ENST00000418800 RNF214Q8ND24 703 aa14.6□□□□□ -0.07
DDR1-232ENST00000418800 NUP153P49790 1475 aaKnown RBP14.6□□□□□ -0.07
DDR1-232ENST00000418800 C9orf84Q5VXU9 1444 aa14.6□□□□□ -0.07
DDR1-232ENST00000418800 MTHFSP49914 203 aa14.6□□□□□ -0.07
DDR1-232ENST00000418800 SLC12A5Q9H2X9 1139 aa14.6□□□□□ -0.07
DDR1-232ENST00000418800 CAMSAP2Q08AD1 1489 aa14.59□□□□□ -0.07
DDR1-232ENST00000418800 RARSP54136 660 aaKnown RBP14.59□□□□□ -0.07
DDR1-232ENST00000418800 TCOF1Q13428 1488 aaKnown RBP14.59□□□□□ -0.07
DDR1-232ENST00000418800 MAPK8IP2Q13387 824 aaPredicted RBP14.59□□□□□ -0.07
DDR1-232ENST00000418800 USP19O94966 1318 aa14.59□□□□□ -0.07
DDR1-232ENST00000418800 UQCRHLA0A096LP55 91 aa14.59□□□□□ -0.07
DDR1-232ENST00000418800 UQCRHP07919 91 aa14.59□□□□□ -0.07
DDR1-232ENST00000418800 GAS2L3Q86XJ1 694 aa14.59□□□□□ -0.07
DDR1-232ENST00000418800 ERCC6L2Q5T890 1561 aa14.59□□□□□ -0.07
DDR1-232ENST00000418800 BCL11BQ9C0K0 894 aaPredicted RBP14.58□□□□□ -0.07
DDR1-232ENST00000418800 STK26Q9P289 416 aa14.58□□□□□ -0.07
DDR1-232ENST00000418800 CAVIN1Q6NZI2 390 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms