RNA–Protein interactions for RNA: ENST00000418533.6

LTBP1-207, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene LTBP1, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-207ENST00000418533 RRP1P56182 461 aaKnown RBP10.62□□□□□ -0.71
LTBP1-207ENST00000418533 ZNF771Q7L3S4 317 aaPredicted RBP10.62□□□□□ -0.71
LTBP1-207ENST00000418533 UBE2Q2Q8WVN8 375 aa10.62□□□□□ -0.71
LTBP1-207ENST00000418533 DNAJC5BQ9UF47 199 aa10.62□□□□□ -0.71
LTBP1-207ENST00000418533 HTATSF1O43719 755 aaKnown RBP10.61□□□□□ -0.71
LTBP1-207ENST00000418533 MFAP1P55081 439 aaKnown RBP10.61□□□□□ -0.71
LTBP1-207ENST00000418533 TERF2IPQ9NYB0 399 aa10.61□□□□□ -0.71
LTBP1-207ENST00000418533 TEX14Q8IWB6 1497 aa10.61□□□□□ -0.71
LTBP1-207ENST00000418533 GOLGA6L1Q8N7Z2 621 aa10.6□□□□□ -0.71
LTBP1-207ENST00000418533 CWC22Q9HCG8 908 aaKnown RBP10.6□□□□□ -0.71
LTBP1-207ENST00000418533 CHMP5Q9NZZ3 219 aa10.6□□□□□ -0.71
LTBP1-207ENST00000418533 NLRP13Q86W25 1043 aa10.6□□□□□ -0.71
LTBP1-207ENST00000418533 L3MBTL2Q969R5 705 aa10.6□□□□□ -0.71
LTBP1-207ENST00000418533 TIAM1Q13009 1591 aa10.6□□□□□ -0.71
LTBP1-207ENST00000418533 SUPT6HQ7KZ85 1726 aaKnown RBP10.6□□□□□ -0.71
LTBP1-207ENST00000418533 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
LTBP1-207ENST00000418533 DDX49Q9Y6V7 483 aaKnown RBP10.6□□□□□ -0.71
LTBP1-207ENST00000418533 ANKRD50Q9ULJ7 1429 aa10.6□□□□□ -0.71
LTBP1-207ENST00000418533 SAFB2Q14151 953 aaKnown RBP eCLIP10.59□□□□□ -0.71
LTBP1-207ENST00000418533 BRPF3Q9ULD4 1205 aa10.59□□□□□ -0.71
LTBP1-207ENST00000418533 PRKRIP1Q9H875 184 aaPredicted RBP10.58□□□□□ -0.72
LTBP1-207ENST00000418533 U2SURPO15042 1029 aaKnown RBP10.58□□□□□ -0.72
LTBP1-207ENST00000418533 RRBP1Q9P2E9 1410 aaKnown RBP10.58□□□□□ -0.72
LTBP1-207ENST00000418533 EXOC6Q8TAG9 804 aa10.58□□□□□ -0.72
LTBP1-207ENST00000418533 ISY1Q9ULR0 285 aaKnown RBP10.57□□□□□ -0.72
LTBP1-207ENST00000418533 SETQ01105 290 aaPredicted RBP10.57□□□□□ -0.72
LTBP1-207ENST00000418533 KCNJ4P48050 445 aa10.57□□□□□ -0.72
LTBP1-207ENST00000418533 TPM4P67936 248 aa10.56□□□□□ -0.72
LTBP1-207ENST00000418533 FGD1P98174 961 aa10.56□□□□□ -0.72
LTBP1-207ENST00000418533 A0A0U1RQG5 324 aaPredicted RBP10.56□□□□□ -0.72
LTBP1-207ENST00000418533 ST18O60284 1047 aa10.56□□□□□ -0.72
LTBP1-207ENST00000418533 EPRSP07814 1512 aaKnown RBP10.56□□□□□ -0.72
LTBP1-207ENST00000418533 PPP6R1Q9UPN7 881 aa10.55□□□□□ -0.72
LTBP1-207ENST00000418533 MYBBP1AQ9BQG0 1328 aaKnown RBP10.55□□□□□ -0.72
LTBP1-207ENST00000418533 TEX35Q5T0J7 233 aa10.55□□□□□ -0.72
LTBP1-207ENST00000418533 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.55□□□□□ -0.72
LTBP1-207ENST00000418533 CGNL1Q0VF96 1302 aa10.54□□□□□ -0.72
LTBP1-207ENST00000418533 C9orf84Q5VXU9 1444 aa10.54□□□□□ -0.72
LTBP1-207ENST00000418533 MAP3K1Q13233 1512 aa10.54□□□□□ -0.72
LTBP1-207ENST00000418533 KIF16BQ96L93 1317 aa10.54□□□□□ -0.72
LTBP1-207ENST00000418533 CCDC66A2RUB6 948 aa10.54□□□□□ -0.72
LTBP1-207ENST00000418533 HDAC5Q9UQL6 1122 aa10.54□□□□□ -0.72
LTBP1-207ENST00000418533 GPS2Q13227 327 aa10.53□□□□□ -0.72
LTBP1-207ENST00000418533 KIF14Q15058 1648 aa10.53□□□□□ -0.72
LTBP1-207ENST00000418533 CENPJQ9HC77 1338 aaPredicted RBP10.53□□□□□ -0.72
LTBP1-207ENST00000418533 EVC2Q86UK5 1308 aa10.53□□□□□ -0.72
LTBP1-207ENST00000418533 ZNF644Q9H582 1327 aaPredicted RBP10.52□□□□□ -0.72
LTBP1-207ENST00000418533 KIAA1211Q6ZU35 1233 aa10.52□□□□□ -0.72
LTBP1-207ENST00000418533 RTF1Q92541 710 aaKnown RBP10.52□□□□□ -0.72
LTBP1-207ENST00000418533 GPRASP1Q5JY77 1395 aa10.52□□□□□ -0.73
LTBP1-207ENST00000418533 ITPRIPQ8IWB1 547 aa10.52□□□□□ -0.73
LTBP1-207ENST00000418533 DIAPH3Q9NSV4 1193 aa10.52□□□□□ -0.73
LTBP1-207ENST00000418533 HFM1A2PYH4 1435 aa10.52□□□□□ -0.73
LTBP1-207ENST00000418533 CRBNQ96SW2 442 aa10.51□□□□□ -0.73
LTBP1-207ENST00000418533 PCF11O94913 1555 aaKnown RBP10.51□□□□□ -0.73
LTBP1-207ENST00000418533 CCDC39Q9UFE4 941 aa10.51□□□□□ -0.73
LTBP1-207ENST00000418533 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
LTBP1-207ENST00000418533 AKNAQ7Z591 1439 aa10.51□□□□□ -0.73
LTBP1-207ENST00000418533 HMGN5P82970 282 aaKnown RBP10.51□□□□□ -0.73
LTBP1-207ENST00000418533 BEGAINQ9BUH8 593 aa10.5□□□□□ -0.73
LTBP1-207ENST00000418533 ATP6V1DQ9Y5K8 247 aa10.5□□□□□ -0.73
LTBP1-207ENST00000418533 AAMPQ13685 434 aa10.5□□□□□ -0.73
LTBP1-207ENST00000418533 R3HCC1Q9Y3T6 440 aaKnown RBP10.5□□□□□ -0.73
LTBP1-207ENST00000418533 ZNF608Q9ULD9 1512 aaPredicted RBP10.5□□□□□ -0.73
LTBP1-207ENST00000418533 NOM1Q5C9Z4 860 aaKnown RBP10.5□□□□□ -0.73
LTBP1-207ENST00000418533 CCDC173Q0VFZ6 552 aa10.49□□□□□ -0.73
LTBP1-207ENST00000418533 OS9Q13438 667 aaPredicted RBP10.49□□□□□ -0.73
LTBP1-207ENST00000418533 POLD1P28340 1107 aa10.49□□□□□ -0.73
LTBP1-207ENST00000418533 TAF3Q5VWG9 929 aa10.49□□□□□ -0.73
LTBP1-207ENST00000418533 THOC2Q8NI27 1593 aaKnown RBP10.49□□□□□ -0.73
LTBP1-207ENST00000418533 DAPK1P53355 1430 aa10.49□□□□□ -0.73
LTBP1-207ENST00000418533 NASPP49321 788 aaPredicted RBP10.49□□□□□ -0.73
LTBP1-207ENST00000418533 NGEFQ8N5V2 710 aa10.49□□□□□ -0.73
LTBP1-207ENST00000418533 TRAK1Q9UPV9 953 aa10.48□□□□□ -0.73
LTBP1-207ENST00000418533 USP47Q96K76 1375 aa10.48□□□□□ -0.73
LTBP1-207ENST00000418533 NUCB2P80303 420 aa10.48□□□□□ -0.73
LTBP1-207ENST00000418533 CDK13Q14004 1512 aaKnown RBP10.48□□□□□ -0.73
LTBP1-207ENST00000418533 TXNDC2Q86VQ3 553 aa10.48□□□□□ -0.73
LTBP1-207ENST00000418533 CCDC141Q6ZP82 1450 aa10.48□□□□□ -0.73
LTBP1-207ENST00000418533 ROCK1Q13464 1354 aa10.48□□□□□ -0.73
LTBP1-207ENST00000418533 TPM3P06753 285 aa10.48□□□□□ -0.73
LTBP1-207ENST00000418533 TRAK2O60296 914 aa10.47□□□□□ -0.73
LTBP1-207ENST00000418533 FOXD4L1Q9NU39 408 aa10.47□□□□□ -0.73
LTBP1-207ENST00000418533 SCAPERQ9BY12 1400 aa10.47□□□□□ -0.73
LTBP1-207ENST00000418533 C11orf95C9JLR9 678 aaPredicted RBP10.47□□□□□ -0.73
LTBP1-207ENST00000418533 SOX12O15370 315 aa10.47□□□□□ -0.73
LTBP1-207ENST00000418533 LMOD3Q0VAK6 560 aa10.47□□□□□ -0.73
LTBP1-207ENST00000418533 AFAP1Q8N556 730 aa10.47□□□□□ -0.73
LTBP1-207ENST00000418533 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
LTBP1-207ENST00000418533 LRPPRCP42704 1394 aaKnown RBP10.47□□□□□ -0.73
LTBP1-207ENST00000418533 WDR97A6NE52 1622 aa10.46□□□□□ -0.73
LTBP1-207ENST00000418533 BACH2Q9BYV9 841 aa10.46□□□□□ -0.73
LTBP1-207ENST00000418533 E9PSI1 815 aa10.46□□□□□ -0.74
LTBP1-207ENST00000418533 U2AF1L5P0DN76 240 aaPredicted RBP10.45□□□□□ -0.74
LTBP1-207ENST00000418533 U2AF1Q01081 240 aaKnown RBP eCLIP10.45□□□□□ -0.74
LTBP1-207ENST00000418533 SMC4Q9NTJ3 1288 aa10.45□□□□□ -0.74
LTBP1-207ENST00000418533 WDR62O43379 1518 aa10.45□□□□□ -0.74
LTBP1-207ENST00000418533 CD109Q6YHK3 1445 aa10.45□□□□□ -0.74
LTBP1-207ENST00000418533 HMMRO75330 724 aa10.45□□□□□ -0.74
LTBP1-207ENST00000418533 CALRP27797 417 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms