RNA–Protein interactions for RNA: ENST00000417762.5

SHPRH-204, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 2

Gene SHPRH, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-204ENST00000417762 FGD6Q6ZV73 1430 aa11.36□□□□□ -0.59
SHPRH-204ENST00000417762 CDK13Q14004 1512 aaKnown RBP11.36□□□□□ -0.59
SHPRH-204ENST00000417762 CHD1O14646 1710 aa11.36□□□□□ -0.59
SHPRH-204ENST00000417762 SUPT6HQ7KZ85 1726 aaKnown RBP11.36□□□□□ -0.59
SHPRH-204ENST00000417762 MYOM3Q5VTT5 1437 aa11.35□□□□□ -0.59
SHPRH-204ENST00000417762 PRG4Q92954 1404 aaPredicted RBP11.35□□□□□ -0.59
SHPRH-204ENST00000417762 PLB1Q6P1J6 1458 aa11.34□□□□□ -0.59
SHPRH-204ENST00000417762 PPP1R15BQ5SWA1 713 aa11.34□□□□□ -0.59
SHPRH-204ENST00000417762 UPF1Q92900 1129 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHPRH-204ENST00000417762 CDK11AQ9UQ88 783 aaPredicted RBP11.34□□□□□ -0.59
SHPRH-204ENST00000417762 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
SHPRH-204ENST00000417762 KCNH8Q96L42 1107 aa11.33□□□□□ -0.6
SHPRH-204ENST00000417762 CLSPNQ9HAW4 1339 aa11.33□□□□□ -0.6
SHPRH-204ENST00000417762 DHX57Q6P158 1386 aaKnown RBP11.32□□□□□ -0.6
SHPRH-204ENST00000417762 KCNK17Q96T54 332 aa11.32□□□□□ -0.6
SHPRH-204ENST00000417762 SETD5Q9C0A6 1442 aa11.32□□□□□ -0.6
SHPRH-204ENST00000417762 PLA2G2EQ9NZK7 142 aa11.31□□□□□ -0.6
SHPRH-204ENST00000417762 PTPRGP23470 1445 aa11.31□□□□□ -0.6
SHPRH-204ENST00000417762 ABCA8O94911 1581 aa11.31□□□□□ -0.6
SHPRH-204ENST00000417762 NCKAP5LQ9HCH0 1330 aa11.31□□□□□ -0.6
SHPRH-204ENST00000417762 SHROOM2Q13796 1616 aa11.31□□□□□ -0.6
SHPRH-204ENST00000417762 RAB3GAP2Q9H2M9 1393 aa11.3□□□□□ -0.6
SHPRH-204ENST00000417762 PDE4AP27815 886 aa11.3□□□□□ -0.6
SHPRH-204ENST00000417762 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
SHPRH-204ENST00000417762 MIA2Q96PC5 1412 aa11.29□□□□□ -0.6
SHPRH-204ENST00000417762 TCOF1Q13428 1488 aaKnown RBP11.29□□□□□ -0.6
SHPRH-204ENST00000417762 TROQ12816 1431 aaPredicted RBP11.28□□□□□ -0.6
SHPRH-204ENST00000417762 BCL2L12Q9HB09 334 aa11.28□□□□□ -0.6
SHPRH-204ENST00000417762 PTPN23Q9H3S7 1636 aa11.27□□□□□ -0.6
SHPRH-204ENST00000417762 ATP10BO94823 1461 aa11.27□□□□□ -0.6
SHPRH-204ENST00000417762 CLASP1Q7Z460 1538 aa11.27□□□□□ -0.61
SHPRH-204ENST00000417762 GTPBP6O43824 516 aaPredicted RBP11.27□□□□□ -0.61
SHPRH-204ENST00000417762 FOSBP53539 338 aa11.27□□□□□ -0.61
SHPRH-204ENST00000417762 STAC3Q96MF2 364 aa11.27□□□□□ -0.61
SHPRH-204ENST00000417762 PTPRKQ15262 1439 aa11.26□□□□□ -0.61
SHPRH-204ENST00000417762 PLEKHD1A6NEE1 506 aa11.26□□□□□ -0.61
SHPRH-204ENST00000417762 KCTD12Q96CX2 325 aaKnown RBP11.26□□□□□ -0.61
SHPRH-204ENST00000417762 VPS9D1Q9Y2B5 631 aa11.26□□□□□ -0.61
SHPRH-204ENST00000417762 SLC4A5Q9BY07 1137 aa11.25□□□□□ -0.61
SHPRH-204ENST00000417762 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
SHPRH-204ENST00000417762 UACAQ9BZF9 1416 aa11.24□□□□□ -0.61
SHPRH-204ENST00000417762 HFM1A2PYH4 1435 aa11.22□□□□□ -0.61
SHPRH-204ENST00000417762 ERCC6L2Q5T890 1561 aa11.22□□□□□ -0.61
SHPRH-204ENST00000417762 ADCY10Q96PN6 1610 aa11.22□□□□□ -0.61
SHPRH-204ENST00000417762 PTPREP23469 700 aa11.21□□□□□ -0.61
SHPRH-204ENST00000417762 DDX27Q96GQ7 796 aaKnown RBP11.21□□□□□ -0.61
SHPRH-204ENST00000417762 LARP6Q9BRS8 491 aaKnown RBP11.21□□□□□ -0.61
SHPRH-204ENST00000417762 GPATCH8Q9UKJ3 1502 aaKnown RBP11.2□□□□□ -0.62
SHPRH-204ENST00000417762 NAIPQ13075 1403 aa11.2□□□□□ -0.62
SHPRH-204ENST00000417762 EVI5O60447 810 aa11.2□□□□□ -0.62
SHPRH-204ENST00000417762 MFSD10Q14728 455 aa11.2□□□□□ -0.62
SHPRH-204ENST00000417762 CFDP1Q9UEE9 299 aaPredicted RBP11.19□□□□□ -0.62
SHPRH-204ENST00000417762 ABCC10Q5T3U5 1492 aa11.19□□□□□ -0.62
SHPRH-204ENST00000417762 AKNAQ7Z591 1439 aa11.18□□□□□ -0.62
SHPRH-204ENST00000417762 ZNF644Q9H582 1327 aaPredicted RBP11.18□□□□□ -0.62
SHPRH-204ENST00000417762 KIF14Q15058 1648 aa11.18□□□□□ -0.62
SHPRH-204ENST00000417762 ZBED2Q9BTP6 218 aa11.18□□□□□ -0.62
SHPRH-204ENST00000417762 BHMG1C9JSJ3 638 aaPredicted RBP11.17□□□□□ -0.62
SHPRH-204ENST00000417762 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
SHPRH-204ENST00000417762 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
SHPRH-204ENST00000417762 MAPKBP1O60336 1514 aa11.17□□□□□ -0.62
SHPRH-204ENST00000417762 ABCC2Q92887 1545 aa11.17□□□□□ -0.62
SHPRH-204ENST00000417762 UHRF1BP1LA0JNW5 1464 aa11.17□□□□□ -0.62
SHPRH-204ENST00000417762 ABCC5O15440 1437 aa11.17□□□□□ -0.62
SHPRH-204ENST00000417762 DAPK1P53355 1430 aa11.17□□□□□ -0.62
SHPRH-204ENST00000417762 RRP7BPQ9NSQ0 103 aa11.16□□□□□ -0.62
SHPRH-204ENST00000417762 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
SHPRH-204ENST00000417762 ITSN2Q9NZM3 1697 aa11.15□□□□□ -0.62
SHPRH-204ENST00000417762 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
SHPRH-204ENST00000417762 ADAM33Q9BZ11 813 aa11.15□□□□□ -0.62
SHPRH-204ENST00000417762 DNMT1P26358 1616 aaKnown RBP11.14□□□□□ -0.63
SHPRH-204ENST00000417762 CAMSAP2Q08AD1 1489 aa11.13□□□□□ -0.63
SHPRH-204ENST00000417762 ACIN1Q9UKV3 1341 aaKnown RBP11.13□□□□□ -0.63
SHPRH-204ENST00000417762 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
SHPRH-204ENST00000417762 PTPN5P54829 565 aa11.12□□□□□ -0.63
SHPRH-204ENST00000417762 ZNF777Q9ULD5 760 aaPredicted RBP11.12□□□□□ -0.63
SHPRH-204ENST00000417762 KDM5BQ9UGL1 1544 aa11.12□□□□□ -0.63
SHPRH-204ENST00000417762 GCC2Q8IWJ2 1684 aa11.11□□□□□ -0.63
SHPRH-204ENST00000417762 THSD4Q6ZMP0 1018 aa11.11□□□□□ -0.63
SHPRH-204ENST00000417762 MRPL50Q8N5N7 158 aaKnown RBP11.11□□□□□ -0.63
SHPRH-204ENST00000417762 TIMELESSQ9UNS1 1208 aa11.11□□□□□ -0.63
SHPRH-204ENST00000417762 CDC42BPAQ5VT25 1732 aa11.11□□□□□ -0.63
SHPRH-204ENST00000417762 SIN3AQ96ST3 1273 aa11.1□□□□□ -0.63
SHPRH-204ENST00000417762 GOLGA8CPA6NN73 597 aa11.09□□□□□ -0.63
SHPRH-204ENST00000417762 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
SHPRH-204ENST00000417762 NCOA1Q15788 1441 aa11.09□□□□□ -0.63
SHPRH-204ENST00000417762 PCDHGA10Q9Y5H3 936 aa11.08□□□□□ -0.64
SHPRH-204ENST00000417762 KDM6BO15054 1643 aa11.08□□□□□ -0.64
SHPRH-204ENST00000417762 ADGRL2O95490 1459 aa11.07□□□□□ -0.64
SHPRH-204ENST00000417762 ZCCHC11Q5TAX3 1644 aaKnown RBP11.07□□□□□ -0.64
SHPRH-204ENST00000417762 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
SHPRH-204ENST00000417762 RSPH4AQ5TD94 716 aa11.07□□□□□ -0.64
SHPRH-204ENST00000417762 CADPS2Q86UW7 1296 aa11.07□□□□□ -0.64
SHPRH-204ENST00000417762 WNT2BQ93097 391 aa11.07□□□□□ -0.64
SHPRH-204ENST00000417762 TRIM52Q96A61 297 aa11.07□□□□□ -0.64
SHPRH-204ENST00000417762 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
SHPRH-204ENST00000417762 HNRNPMP52272 730 aaKnown RBP eCLIP11.06□□□□□ -0.64
SHPRH-204ENST00000417762 NEUROD1Q13562 356 aa11.06□□□□□ -0.64
SHPRH-204ENST00000417762 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
SHPRH-204ENST00000417762 MBD5Q9P267 1494 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms