RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TSR1Q2NL82 804 aaKnown RBP14.72□□□□□ -0.05
UBR4-205ENST00000417040 TEX35Q5T0J7 233 aa14.72□□□□□ -0.05
UBR4-205ENST00000417040 MPNDQ8N594 471 aa14.72□□□□□ -0.05
UBR4-205ENST00000417040 MROH2BQ7Z745 1585 aa14.72□□□□□ -0.05
UBR4-205ENST00000417040 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
UBR4-205ENST00000417040 CGNL1Q0VF96 1302 aa14.72□□□□□ -0.05
UBR4-205ENST00000417040 EIF2S2P20042 333 aaKnown RBP14.72□□□□□ -0.05
UBR4-205ENST00000417040 DZIP1LQ8IYY4 767 aaKnown RBP14.72□□□□□ -0.05
UBR4-205ENST00000417040 TRAK2O60296 914 aa14.72□□□□□ -0.05
UBR4-205ENST00000417040 LMOD3Q0VAK6 560 aa14.71□□□□□ -0.05
UBR4-205ENST00000417040 CAVIN1Q6NZI2 390 aaKnown RBP14.71□□□□□ -0.06
UBR4-205ENST00000417040 CCDC27Q2M243 656 aa14.7□□□□□ -0.06
UBR4-205ENST00000417040 CDCA7LQ96GN5 454 aa14.7□□□□□ -0.06
UBR4-205ENST00000417040 RUSC2Q8N2Y8 1516 aa14.7□□□□□ -0.06
UBR4-205ENST00000417040 KIF3AQ9Y496 699 aa14.69□□□□□ -0.06
UBR4-205ENST00000417040 CEP89Q96ST8 783 aa14.69□□□□□ -0.06
UBR4-205ENST00000417040 DDX19BQ9UMR2 479 aa14.69□□□□□ -0.06
UBR4-205ENST00000417040 MRE11P49959 708 aa14.69□□□□□ -0.06
UBR4-205ENST00000417040 SASS6Q6UVJ0 657 aa14.69□□□□□ -0.06
UBR4-205ENST00000417040 NGDNQ8NEJ9 315 aaKnown RBP14.68□□□□□ -0.06
UBR4-205ENST00000417040 REC8O95072 547 aa14.68□□□□□ -0.06
UBR4-205ENST00000417040 RIPK4P57078 832 aa14.68□□□□□ -0.06
UBR4-205ENST00000417040 CCDC39Q9UFE4 941 aa14.68□□□□□ -0.06
UBR4-205ENST00000417040 TPM1P09493 284 aa14.67□□□□□ -0.06
UBR4-205ENST00000417040 SMC3Q9UQE7 1217 aa14.67□□□□□ -0.06
UBR4-205ENST00000417040 WIZO95785 1651 aa14.67□□□□□ -0.06
UBR4-205ENST00000417040 CCDC18Q5T9S5 1454 aa14.67□□□□□ -0.06
UBR4-205ENST00000417040 TTLL5Q6EMB2 1281 aa14.66□□□□□ -0.06
UBR4-205ENST00000417040 CCDC70Q6NSX1 233 aa14.66□□□□□ -0.06
UBR4-205ENST00000417040 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
UBR4-205ENST00000417040 SPC24Q8NBT2 197 aa14.65□□□□□ -0.06
UBR4-205ENST00000417040 MNS1Q8NEH6 495 aa14.65□□□□□ -0.06
UBR4-205ENST00000417040 KIF7Q2M1P5 1343 aa14.65□□□□□ -0.06
UBR4-205ENST00000417040 TDRD9Q8NDG6 1382 aaKnown RBP14.65□□□□□ -0.06
UBR4-205ENST00000417040 PRPF40AO75400 957 aaKnown RBP14.65□□□□□ -0.06
UBR4-205ENST00000417040 SKIDA1Q1XH10 827 aa14.65□□□□□ -0.06
UBR4-205ENST00000417040 INTS3Q68E01 1043 aaKnown RBP14.65□□□□□ -0.06
UBR4-205ENST00000417040 TPM2P07951 284 aa14.65□□□□□ -0.06
UBR4-205ENST00000417040 AKAP17AQ02040 695 aaKnown RBP14.65□□□□□ -0.06
UBR4-205ENST00000417040 NUCB2P80303 420 aa14.64□□□□□ -0.07
UBR4-205ENST00000417040 PDILTQ8N807 584 aa14.64□□□□□ -0.07
UBR4-205ENST00000417040 CCDC144AA2RUR9 1427 aa14.64□□□□□ -0.07
UBR4-205ENST00000417040 IFIT2P09913 472 aaKnown RBP14.63□□□□□ -0.07
UBR4-205ENST00000417040 RAD21O60216 631 aa14.63□□□□□ -0.07
UBR4-205ENST00000417040 MAPK8IP2Q13387 824 aaPredicted RBP14.63□□□□□ -0.07
UBR4-205ENST00000417040 APPP05067 770 aa14.63□□□□□ -0.07
UBR4-205ENST00000417040 ZKSCAN1P17029 563 aaPredicted RBP14.63□□□□□ -0.07
UBR4-205ENST00000417040 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.62□□□□□ -0.07
UBR4-205ENST00000417040 CCDC7Q96M83 1385 aa14.62□□□□□ -0.07
UBR4-205ENST00000417040 MINK1Q8N4C8 1332 aaPredicted RBP14.62□□□□□ -0.07
UBR4-205ENST00000417040 HMOX1P09601 288 aa14.62□□□□□ -0.07
UBR4-205ENST00000417040 PRKCSHP14314 528 aaPredicted RBP14.62□□□□□ -0.07
UBR4-205ENST00000417040 TRIM29Q14134 588 aa14.62□□□□□ -0.07
UBR4-205ENST00000417040 C1orf115Q9H7X2 142 aa14.62□□□□□ -0.07
UBR4-205ENST00000417040 C9orf78Q9NZ63 289 aaPredicted RBP14.62□□□□□ -0.07
UBR4-205ENST00000417040 NAP1L1P55209 391 aaKnown RBP14.61□□□□□ -0.07
UBR4-205ENST00000417040 NACADO15069 1562 aa14.61□□□□□ -0.07
UBR4-205ENST00000417040 HDAC5Q9UQL6 1122 aa14.61□□□□□ -0.07
UBR4-205ENST00000417040 CNTLNQ9NXG0 1405 aa14.61□□□□□ -0.07
UBR4-205ENST00000417040 RUFY2Q8WXA3 655 aa14.61□□□□□ -0.07
UBR4-205ENST00000417040 SYNE3Q6ZMZ3 975 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 ADAMTS8Q9UP79 889 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 CPLX1O14810 134 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 TSPY26PQ9H489 355 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 WASHC2CQ9Y4E1 1318 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 G3V3G9 751 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 DCAF8Q5TAQ9 597 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 COG3Q96JB2 828 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 WASHC2AQ641Q2 1341 aa14.6□□□□□ -0.07
UBR4-205ENST00000417040 DHX37Q8IY37 1157 aaKnown RBP14.59□□□□□ -0.07
UBR4-205ENST00000417040 PDZRN3Q9UPQ7 1066 aa14.59□□□□□ -0.07
UBR4-205ENST00000417040 NFXL1Q6ZNB6 911 aa14.59□□□□□ -0.07
UBR4-205ENST00000417040 ARGLU1Q9NWB6 273 aaPredicted RBP14.59□□□□□ -0.07
UBR4-205ENST00000417040 MSH5O43196 834 aa14.59□□□□□ -0.07
UBR4-205ENST00000417040 RUNDC1Q96C34 613 aa14.59□□□□□ -0.07
UBR4-205ENST00000417040 DIAPH1O60610 1272 aaKnown RBP14.58□□□□□ -0.07
UBR4-205ENST00000417040 EFCAB2Q5VUJ9 269 aa14.58□□□□□ -0.07
UBR4-205ENST00000417040 FKBP5Q13451 457 aaPredicted RBP14.58□□□□□ -0.08
UBR4-205ENST00000417040 RUFY1Q96T51 708 aa14.58□□□□□ -0.08
UBR4-205ENST00000417040 CDC45O75419 566 aa14.58□□□□□ -0.08
UBR4-205ENST00000417040 TRIM5Q9C035 493 aa14.58□□□□□ -0.08
UBR4-205ENST00000417040 CEBPZQ03701 1054 aaKnown RBP14.57□□□□□ -0.08
UBR4-205ENST00000417040 UQCRHLA0A096LP55 91 aa14.57□□□□□ -0.08
UBR4-205ENST00000417040 UQCRHP07919 91 aa14.57□□□□□ -0.08
UBR4-205ENST00000417040 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
UBR4-205ENST00000417040 NOM1Q5C9Z4 860 aaKnown RBP14.57□□□□□ -0.08
UBR4-205ENST00000417040 ZNF428Q96B54 188 aa14.57□□□□□ -0.08
UBR4-205ENST00000417040 CCDC173Q0VFZ6 552 aa14.56□□□□□ -0.08
UBR4-205ENST00000417040 BCAR3O75815 825 aa14.56□□□□□ -0.08
UBR4-205ENST00000417040 SMC2O95347 1197 aa14.56□□□□□ -0.08
UBR4-205ENST00000417040 IPO7O95373 1038 aaKnown RBP14.56□□□□□ -0.08
UBR4-205ENST00000417040 C1orf141Q5JVX7 400 aa14.56□□□□□ -0.08
UBR4-205ENST00000417040 SKAP1Q86WV1 359 aa14.56□□□□□ -0.08
UBR4-205ENST00000417040 CCDC73Q6ZRK6 1079 aa14.56□□□□□ -0.08
UBR4-205ENST00000417040 AK7Q96M32 723 aa14.56□□□□□ -0.08
UBR4-205ENST00000417040 CARMIL2Q6F5E8 1435 aa14.56□□□□□ -0.08
UBR4-205ENST00000417040 FMNL2Q96PY5 1086 aa14.55□□□□□ -0.08
UBR4-205ENST00000417040 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
UBR4-205ENST00000417040 CHMP4AQ9BY43 222 aa14.55□□□□□ -0.08
UBR4-205ENST00000417040 GRPEL1Q9HAV7 217 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms