RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 CLTCL1P53675 1640 aa16.89■□□□□ 0.29
LRRTM1-205ENST00000417012 LAMC1P11047 1609 aa16.89■□□□□ 0.29
LRRTM1-205ENST00000417012 TRPM2O94759 1503 aa16.88■□□□□ 0.29
LRRTM1-205ENST00000417012 NPM1P06748 294 aaKnown RBP eCLIP16.88■□□□□ 0.29
LRRTM1-205ENST00000417012 PANK3Q9H999 370 aa16.88■□□□□ 0.29
LRRTM1-205ENST00000417012 KANK1Q14678 1352 aa16.87■□□□□ 0.29
LRRTM1-205ENST00000417012 USP35Q9P2H5 1018 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 CEP152O94986 1710 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 PLIN1O60240 522 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 TMF1P82094 1093 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 LAS1LQ9Y4W2 734 aaKnown RBP16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 PTPRTO14522 1441 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 TET3O43151 1660 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 UGGT1Q9NYU2 1555 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 NEFMP07197 916 aa16.86■□□□□ 0.29
LRRTM1-205ENST00000417012 CRBNQ96SW2 442 aa16.85■□□□□ 0.29
LRRTM1-205ENST00000417012 RNF17Q9BXT8 1623 aaKnown RBP16.84■□□□□ 0.29
LRRTM1-205ENST00000417012 PPM1GO15355 546 aaPredicted RBP16.84■□□□□ 0.29
LRRTM1-205ENST00000417012 KIDINS220Q9ULH0 1771 aa16.84■□□□□ 0.29
LRRTM1-205ENST00000417012 DDRGK1Q96HY6 314 aa16.83■□□□□ 0.29
LRRTM1-205ENST00000417012 MROH1Q8NDA8 1641 aa16.83■□□□□ 0.28
LRRTM1-205ENST00000417012 VWDEQ8N2E2 1590 aa16.82■□□□□ 0.28
LRRTM1-205ENST00000417012 CFAP65Q6ZU64 1925 aaKnown RBP16.82■□□□□ 0.28
LRRTM1-205ENST00000417012 CD109Q6YHK3 1445 aa16.8■□□□□ 0.28
LRRTM1-205ENST00000417012 GGT6Q6P531 493 aa16.78■□□□□ 0.28
LRRTM1-205ENST00000417012 IQGAP1P46940 1657 aa16.78■□□□□ 0.28
LRRTM1-205ENST00000417012 ZNF518AQ6AHZ1 1483 aa16.78■□□□□ 0.28
LRRTM1-205ENST00000417012 CFAP70Q5T0N1 1121 aa16.78■□□□□ 0.28
LRRTM1-205ENST00000417012 ADGRF5Q8IZF2 1346 aa16.77■□□□□ 0.28
LRRTM1-205ENST00000417012 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
LRRTM1-205ENST00000417012 SKAP1Q86WV1 359 aa16.76■□□□□ 0.27
LRRTM1-205ENST00000417012 PPRC1Q5VV67 1664 aaKnown RBP16.76■□□□□ 0.27
LRRTM1-205ENST00000417012 WDR43Q15061 677 aaKnown RBP eCLIP16.75■□□□□ 0.27
LRRTM1-205ENST00000417012 ADAMTS8Q9UP79 889 aa16.75■□□□□ 0.27
LRRTM1-205ENST00000417012 SCAF11Q99590 1463 aaKnown RBP16.75■□□□□ 0.27
LRRTM1-205ENST00000417012 RAPGEF3O95398 923 aa16.75■□□□□ 0.27
LRRTM1-205ENST00000417012 C20orf194Q5TEA3 1177 aa16.75■□□□□ 0.27
LRRTM1-205ENST00000417012 CENPQQ7L2Z9 268 aaPredicted RBP16.75■□□□□ 0.27
LRRTM1-205ENST00000417012 EFCAB6Q5THR3 1501 aa16.74■□□□□ 0.27
LRRTM1-205ENST00000417012 KDM2BQ8NHM5 1336 aa16.74■□□□□ 0.27
LRRTM1-205ENST00000417012 KIF1BO60333 1816 aa16.73■□□□□ 0.27
LRRTM1-205ENST00000417012 KNSTRNQ9Y448 316 aa16.73■□□□□ 0.27
LRRTM1-205ENST00000417012 POGZQ7Z3K3 1410 aa16.73■□□□□ 0.27
LRRTM1-205ENST00000417012 MROH2AA6NES4 1674 aa16.73■□□□□ 0.27
LRRTM1-205ENST00000417012 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.72■□□□□ 0.27
LRRTM1-205ENST00000417012 DAXXQ9UER7 740 aaPredicted RBP16.72■□□□□ 0.27
LRRTM1-205ENST00000417012 STAC3Q96MF2 364 aa16.71■□□□□ 0.27
LRRTM1-205ENST00000417012 PLEKHH1Q9ULM0 1364 aa16.71■□□□□ 0.27
LRRTM1-205ENST00000417012 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
LRRTM1-205ENST00000417012 DUSP27Q5VZP5 1158 aa16.71■□□□□ 0.27
LRRTM1-205ENST00000417012 FRMPD1Q5SYB0 1578 aa16.7■□□□□ 0.26
LRRTM1-205ENST00000417012 GOLGA2Q08379 1002 aa16.7■□□□□ 0.26
LRRTM1-205ENST00000417012 ABCA6Q8N139 1617 aa16.7■□□□□ 0.26
LRRTM1-205ENST00000417012 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
LRRTM1-205ENST00000417012 IL27Q8NEV9 243 aa16.7■□□□□ 0.26
LRRTM1-205ENST00000417012 NPATQ14207 1427 aa16.68■□□□□ 0.26
LRRTM1-205ENST00000417012 FAM161AQ3B820 660 aa16.68■□□□□ 0.26
LRRTM1-205ENST00000417012 CDCA8Q53HL2 280 aa16.68■□□□□ 0.26
LRRTM1-205ENST00000417012 HECW2Q9P2P5 1572 aa16.67■□□□□ 0.26
LRRTM1-205ENST00000417012 AMER1Q5JTC6 1135 aaPredicted RBP16.67■□□□□ 0.26
LRRTM1-205ENST00000417012 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
LRRTM1-205ENST00000417012 ZNF521Q96K83 1311 aa16.67■□□□□ 0.26
LRRTM1-205ENST00000417012 NOS1P29475 1434 aa16.67■□□□□ 0.26
LRRTM1-205ENST00000417012 SYNMO15061 1565 aa16.67■□□□□ 0.26
LRRTM1-205ENST00000417012 NUTM2DQ5VT03 806 aaPredicted RBP16.67■□□□□ 0.26
LRRTM1-205ENST00000417012 MLH3Q9UHC1 1453 aa16.66■□□□□ 0.26
LRRTM1-205ENST00000417012 CFAP74Q9C0B2 1584 aa16.66■□□□□ 0.26
LRRTM1-205ENST00000417012 IFT172Q9UG01 1749 aa16.66■□□□□ 0.26
LRRTM1-205ENST00000417012 KIAA1210Q9ULL0 1709 aa16.65■□□□□ 0.26
LRRTM1-205ENST00000417012 MYOM1P52179 1685 aa16.65■□□□□ 0.26
LRRTM1-205ENST00000417012 MYOM2P54296 1465 aa16.65■□□□□ 0.26
LRRTM1-205ENST00000417012 SENP3Q9H4L4 574 aaPredicted RBP16.65■□□□□ 0.26
LRRTM1-205ENST00000417012 LMTK2Q8IWU2 1503 aa16.65■□□□□ 0.26
LRRTM1-205ENST00000417012 ASXL1Q8IXJ9 1541 aa16.65■□□□□ 0.26
LRRTM1-205ENST00000417012 PIK3C2GO75747 1445 aa16.65■□□□□ 0.26
LRRTM1-205ENST00000417012 NFKBIBQ15653 356 aa16.64■□□□□ 0.26
LRRTM1-205ENST00000417012 C8orf34Q49A92 452 aa16.64■□□□□ 0.25
LRRTM1-205ENST00000417012 CYB5RLQ6IPT4 315 aa16.64■□□□□ 0.25
LRRTM1-205ENST00000417012 NEURL4Q96JN8 1562 aa16.63■□□□□ 0.25
LRRTM1-205ENST00000417012 TRAK1Q9UPV9 953 aa16.63■□□□□ 0.25
LRRTM1-205ENST00000417012 SLC4A3P48751 1232 aa16.63■□□□□ 0.25
LRRTM1-205ENST00000417012 SLFN5Q08AF3 891 aa16.63■□□□□ 0.25
LRRTM1-205ENST00000417012 GSE1Q14687 1217 aa16.63■□□□□ 0.25
LRRTM1-205ENST00000417012 TMEM132EQ6IEE7 984 aa16.63■□□□□ 0.25
LRRTM1-205ENST00000417012 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
LRRTM1-205ENST00000417012 ERVK-7P63135 1459 aa16.62■□□□□ 0.25
LRRTM1-205ENST00000417012 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
LRRTM1-205ENST00000417012 RTN4Q9NQC3 1192 aaKnown RBP16.61■□□□□ 0.25
LRRTM1-205ENST00000417012 RGS3P49796 1198 aa16.61■□□□□ 0.25
LRRTM1-205ENST00000417012 ABCC3O15438 1527 aa16.6■□□□□ 0.25
LRRTM1-205ENST00000417012 NPC1L1Q9UHC9 1359 aa16.6■□□□□ 0.25
LRRTM1-205ENST00000417012 NKTRP30414 1462 aaKnown RBP16.6■□□□□ 0.25
LRRTM1-205ENST00000417012 CARD14Q9BXL6 1004 aa16.59■□□□□ 0.25
LRRTM1-205ENST00000417012 SIGLEC1Q9BZZ2 1709 aa16.59■□□□□ 0.25
LRRTM1-205ENST00000417012 NRXN1Q9ULB1 1477 aa16.59■□□□□ 0.25
LRRTM1-205ENST00000417012 CCDC146Q8IYE0 955 aa16.59■□□□□ 0.25
LRRTM1-205ENST00000417012 PPLO60437 1756 aa16.58■□□□□ 0.24
LRRTM1-205ENST00000417012 NEO1Q92859 1461 aa16.57■□□□□ 0.24
LRRTM1-205ENST00000417012 TRMT2AQ8IZ69 625 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms