RNA–Protein interactions for RNA: ENST00000416893.2

ATG4AP1-201, Transcript of autophagy related 4A cysteine peptidase pseudogene 1, humanhuman

BASIC

Gene ATG4AP1, Length 538 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AP1-201ENST00000416893 NKX2-3Q8TAU0 364 aa9.68□□□□□ -0.86
ATG4AP1-201ENST00000416893 PRR14Q9BWN1 585 aa9.68□□□□□ -0.86
ATG4AP1-201ENST00000416893 PRKD2Q9BZL6 878 aa9.68□□□□□ -0.86
ATG4AP1-201ENST00000416893 FCHSD2O94868 740 aa9.67□□□□□ -0.86
ATG4AP1-201ENST00000416893 TMEM134Q9H6X4 195 aa9.67□□□□□ -0.86
ATG4AP1-201ENST00000416893 LAPTM4AQ15012 233 aa9.66□□□□□ -0.86
ATG4AP1-201ENST00000416893 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
ATG4AP1-201ENST00000416893 RCCD1A6NED2 376 aa9.65□□□□□ -0.86
ATG4AP1-201ENST00000416893 ZPR1O75312 459 aa9.65□□□□□ -0.86
ATG4AP1-201ENST00000416893 PCDHB3Q9Y5E6 796 aa9.65□□□□□ -0.86
ATG4AP1-201ENST00000416893 V9GY48 417 aaPredicted RBP9.64□□□□□ -0.87
ATG4AP1-201ENST00000416893 GFRA3O60609 400 aa9.63□□□□□ -0.87
ATG4AP1-201ENST00000416893 GGCXP38435 758 aa9.63□□□□□ -0.87
ATG4AP1-201ENST00000416893 SMYD5Q6GMV2 418 aa9.62□□□□□ -0.87
ATG4AP1-201ENST00000416893 BLOC1S3Q6QNY0 202 aa9.62□□□□□ -0.87
ATG4AP1-201ENST00000416893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.61□□□□□ -0.87
ATG4AP1-201ENST00000416893 KMT5BQ4FZB7 885 aa9.61□□□□□ -0.87
ATG4AP1-201ENST00000416893 TMUB1Q9BVT8 246 aa9.61□□□□□ -0.87
ATG4AP1-201ENST00000416893 TESPA1A2RU30 521 aaPredicted RBP9.6□□□□□ -0.87
ATG4AP1-201ENST00000416893 ACTN4O43707 911 aaKnown RBP9.59□□□□□ -0.87
ATG4AP1-201ENST00000416893 CFHP08603 1231 aa9.59□□□□□ -0.87
ATG4AP1-201ENST00000416893 HIC1Q14526 733 aa9.59□□□□□ -0.87
ATG4AP1-201ENST00000416893 OATP04181 439 aa9.58□□□□□ -0.88
ATG4AP1-201ENST00000416893 RBM26Q5T8P6 1007 aaKnown RBP9.58□□□□□ -0.88
ATG4AP1-201ENST00000416893 PXYLP1Q8TE99 480 aa9.58□□□□□ -0.88
ATG4AP1-201ENST00000416893 NRG2O14511 850 aaPredicted RBP9.57□□□□□ -0.88
ATG4AP1-201ENST00000416893 SLC10A3P09131 477 aa9.57□□□□□ -0.88
ATG4AP1-201ENST00000416893 RB1CC1Q8TDY2 1594 aa9.56□□□□□ -0.88
ATG4AP1-201ENST00000416893 TLL1O43897 1013 aa9.56□□□□□ -0.88
ATG4AP1-201ENST00000416893 NACADO15069 1562 aa9.55□□□□□ -0.88
ATG4AP1-201ENST00000416893 TULP1O00294 542 aaPredicted RBP9.55□□□□□ -0.88
ATG4AP1-201ENST00000416893 METTL3Q86U44 580 aaKnown RBP9.55□□□□□ -0.88
ATG4AP1-201ENST00000416893 ZCCHC6Q5VYS8 1495 aaKnown RBP9.54□□□□□ -0.88
ATG4AP1-201ENST00000416893 RNF223E7ERA6 249 aa9.54□□□□□ -0.88
ATG4AP1-201ENST00000416893 LCE2BO14633 110 aa9.54□□□□□ -0.88
ATG4AP1-201ENST00000416893 TRAF7Q6Q0C0 670 aa9.54□□□□□ -0.88
ATG4AP1-201ENST00000416893 GNPATO15228 680 aa9.53□□□□□ -0.88
ATG4AP1-201ENST00000416893 FECHP22830 423 aa9.52□□□□□ -0.89
ATG4AP1-201ENST00000416893 PDZRN3Q9UPQ7 1066 aa9.52□□□□□ -0.89
ATG4AP1-201ENST00000416893 GPR37O15354 613 aa9.51□□□□□ -0.89
ATG4AP1-201ENST00000416893 NR1I2O75469 434 aa9.51□□□□□ -0.89
ATG4AP1-201ENST00000416893 RSPH4AQ5TD94 716 aa9.51□□□□□ -0.89
ATG4AP1-201ENST00000416893 S1PR4O95977 384 aa9.5□□□□□ -0.89
ATG4AP1-201ENST00000416893 ADH1BP00325 375 aa9.5□□□□□ -0.89
ATG4AP1-201ENST00000416893 SLC19A1P41440 591 aa9.5□□□□□ -0.89
ATG4AP1-201ENST00000416893 ANKLE1Q8NAG6 615 aa9.5□□□□□ -0.89
ATG4AP1-201ENST00000416893 MYO15BQ96JP2 1530 aa9.5□□□□□ -0.89
ATG4AP1-201ENST00000416893 EMID1Q96A84 441 aaPredicted RBP9.49□□□□□ -0.89
ATG4AP1-201ENST00000416893 PPEF1O14829 653 aaPredicted RBP9.48□□□□□ -0.89
ATG4AP1-201ENST00000416893 DAXXQ9UER7 740 aaPredicted RBP9.48□□□□□ -0.89
ATG4AP1-201ENST00000416893 DCAF1Q9Y4B6 1507 aa9.46□□□□□ -0.89
ATG4AP1-201ENST00000416893 PUS10Q3MIT2 529 aaKnown RBP9.46□□□□□ -0.9
ATG4AP1-201ENST00000416893 SCUBE3Q8IX30 993 aa9.46□□□□□ -0.9
ATG4AP1-201ENST00000416893 SPRYD7Q5W111 196 aa9.45□□□□□ -0.9
ATG4AP1-201ENST00000416893 RDH13Q8NBN7 331 aa9.45□□□□□ -0.9
ATG4AP1-201ENST00000416893 SLC6A16Q9GZN6 736 aa9.45□□□□□ -0.9
ATG4AP1-201ENST00000416893 TRIM67Q6ZTA4 783 aa9.44□□□□□ -0.9
ATG4AP1-201ENST00000416893 ZNF598Q86UK7 904 aaKnown RBP9.44□□□□□ -0.9
ATG4AP1-201ENST00000416893 GPIHBP1Q8IV16 184 aa9.44□□□□□ -0.9
ATG4AP1-201ENST00000416893 NLRP7Q8WX94 980 aa9.44□□□□□ -0.9
ATG4AP1-201ENST00000416893 DDX11L8A8MPP1 907 aa9.43□□□□□ -0.9
ATG4AP1-201ENST00000416893 LIAT1Q6ZQX7 453 aa9.43□□□□□ -0.9
ATG4AP1-201ENST00000416893 SPSB2Q99619 263 aa9.42□□□□□ -0.9
ATG4AP1-201ENST00000416893 PHOX2BQ99453 314 aa9.41□□□□□ -0.9
ATG4AP1-201ENST00000416893 PRR20EP86478 221 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 PRR20CP86479 221 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 PRR20DP86480 221 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 PRR20BP86481 221 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 PRR20AP86496 221 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 FUT2Q10981 343 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 MORN1Q5T089 497 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 ZNF697Q5TEC3 545 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
ATG4AP1-201ENST00000416893 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
ATG4AP1-201ENST00000416893 GCGRP47871 477 aa9.39□□□□□ -0.91
ATG4AP1-201ENST00000416893 PLA2G2CQ5R387 149 aa9.39□□□□□ -0.91
ATG4AP1-201ENST00000416893 UNC13AQ9UPW8 1703 aa9.38□□□□□ -0.91
ATG4AP1-201ENST00000416893 THAP11Q96EK4 314 aa9.37□□□□□ -0.91
ATG4AP1-201ENST00000416893 GDF9O60383 454 aa9.36□□□□□ -0.91
ATG4AP1-201ENST00000416893 PKDCCQ504Y2 493 aa9.36□□□□□ -0.91
ATG4AP1-201ENST00000416893 BCANQ96GW7 911 aa9.36□□□□□ -0.91
ATG4AP1-201ENST00000416893 SLC27A5Q9Y2P5 690 aa9.36□□□□□ -0.91
ATG4AP1-201ENST00000416893 DGAT1O75907 488 aa9.35□□□□□ -0.91
ATG4AP1-201ENST00000416893 FMNL1O95466 1100 aaPredicted RBP9.35□□□□□ -0.91
ATG4AP1-201ENST00000416893 ZNF787Q6DD87 383 aa9.35□□□□□ -0.91
ATG4AP1-201ENST00000416893 TNFRSF10AO00220 468 aa9.34□□□□□ -0.91
ATG4AP1-201ENST00000416893 MAP2K5Q13163 448 aa9.33□□□□□ -0.92
ATG4AP1-201ENST00000416893 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.33□□□□□ -0.92
ATG4AP1-201ENST00000416893 FAM160A2Q8N612 972 aaPredicted RBP9.33□□□□□ -0.92
ATG4AP1-201ENST00000416893 SALL2Q9Y467 1007 aaPredicted RBP9.33□□□□□ -0.92
ATG4AP1-201ENST00000416893 MYT1Q01538 1121 aa9.32□□□□□ -0.92
ATG4AP1-201ENST00000416893 FCF1Q9Y324 198 aaKnown RBP9.32□□□□□ -0.92
ATG4AP1-201ENST00000416893 FAM187AA6NFU0 413 aa9.31□□□□□ -0.92
ATG4AP1-201ENST00000416893 RPIAP49247 311 aa9.31□□□□□ -0.92
ATG4AP1-201ENST00000416893 GRIPAP1Q4V328 841 aa9.31□□□□□ -0.92
ATG4AP1-201ENST00000416893 LMOD2Q6P5Q4 547 aa9.31□□□□□ -0.92
ATG4AP1-201ENST00000416893 BRICD5Q6PL45 260 aa9.31□□□□□ -0.92
ATG4AP1-201ENST00000416893 PRDM9Q9NQV7 894 aa9.3□□□□□ -0.92
ATG4AP1-201ENST00000416893 CD46P15529 392 aa9.29□□□□□ -0.92
ATG4AP1-201ENST00000416893 PKD2L1Q9P0L9 805 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms