RNA–Protein interactions for RNA: ENST00000416529.5

RBM39-209, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-209ENST00000416529 REREQ9P2R6 1566 aa11.66□□□□□ -0.54
RBM39-209ENST00000416529 SYCP2Q9BX26 1530 aa11.65□□□□□ -0.54
RBM39-209ENST00000416529 DNMT1P26358 1616 aaKnown RBP11.65□□□□□ -0.54
RBM39-209ENST00000416529 ROCK1Q13464 1354 aa11.65□□□□□ -0.55
RBM39-209ENST00000416529 SPAG9O60271 1321 aaKnown RBP11.64□□□□□ -0.55
RBM39-209ENST00000416529 ARHGEF12Q9NZN5 1544 aa11.64□□□□□ -0.55
RBM39-209ENST00000416529 FRMPD1Q5SYB0 1578 aa11.62□□□□□ -0.55
RBM39-209ENST00000416529 DAPK1P53355 1430 aa11.62□□□□□ -0.55
RBM39-209ENST00000416529 TRAPPC8Q9Y2L5 1435 aa11.62□□□□□ -0.55
RBM39-209ENST00000416529 ZFYVE16Q7Z3T8 1539 aa11.62□□□□□ -0.55
RBM39-209ENST00000416529 HNRNPMP52272 730 aaKnown RBP eCLIP11.62□□□□□ -0.55
RBM39-209ENST00000416529 LCE2DQ5TA82 110 aaPredicted RBP11.62□□□□□ -0.55
RBM39-209ENST00000416529 ANKRD30AQ9BXX3 1397 aa11.62□□□□□ -0.55
RBM39-209ENST00000416529 ATP10AO60312 1499 aa11.62□□□□□ -0.55
RBM39-209ENST00000416529 ADGRL2O95490 1459 aa11.62□□□□□ -0.55
RBM39-209ENST00000416529 PLXNC1O60486 1568 aa11.62□□□□□ -0.55
RBM39-209ENST00000416529 ABCC5O15440 1437 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 AGLP35573 1532 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 ARHGEF40Q8TER5 1519 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 FAM135AQ9P2D6 1515 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 SOX12O15370 315 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 RAPGEF3O95398 923 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 AFAP1Q8N556 730 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
RBM39-209ENST00000416529 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 LMTK3Q96Q04 1460 aa11.61□□□□□ -0.55
RBM39-209ENST00000416529 INO80Q9ULG1 1556 aaPredicted RBP11.61□□□□□ -0.55
RBM39-209ENST00000416529 ADGBQ8N7X0 1667 aa11.6□□□□□ -0.55
RBM39-209ENST00000416529 EFCAB3Q8N7B9 438 aa11.6□□□□□ -0.55
RBM39-209ENST00000416529 C9orf84Q5VXU9 1444 aa11.6□□□□□ -0.55
RBM39-209ENST00000416529 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
RBM39-209ENST00000416529 ZNF644Q9H582 1327 aaPredicted RBP11.6□□□□□ -0.55
RBM39-209ENST00000416529 CROCC2H7BZ55 1655 aa11.59□□□□□ -0.55
RBM39-209ENST00000416529 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
RBM39-209ENST00000416529 RNF25Q96BH1 459 aaPredicted RBP11.59□□□□□ -0.55
RBM39-209ENST00000416529 ZFP91Q96JP5 570 aaPredicted RBP11.59□□□□□ -0.55
RBM39-209ENST00000416529 KIDINS220Q9ULH0 1771 aa11.59□□□□□ -0.55
RBM39-209ENST00000416529 DHX29Q7Z478 1369 aaKnown RBP11.58□□□□□ -0.56
RBM39-209ENST00000416529 FAM50AQ14320 339 aaKnown RBP11.58□□□□□ -0.56
RBM39-209ENST00000416529 DUOX2Q9NRD8 1548 aa11.57□□□□□ -0.56
RBM39-209ENST00000416529 PLSCR2Q9NRY7 297 aa11.57□□□□□ -0.56
RBM39-209ENST00000416529 NCOA1Q15788 1441 aa11.57□□□□□ -0.56
RBM39-209ENST00000416529 ERBINQ96RT1 1412 aa11.57□□□□□ -0.56
RBM39-209ENST00000416529 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
RBM39-209ENST00000416529 ST18O60284 1047 aa11.56□□□□□ -0.56
RBM39-209ENST00000416529 ECM2O94769 699 aaPredicted RBP11.56□□□□□ -0.56
RBM39-209ENST00000416529 HRCP23327 699 aa11.56□□□□□ -0.56
RBM39-209ENST00000416529 EIF2AK4Q9P2K8 1649 aaKnown RBP11.56□□□□□ -0.56
RBM39-209ENST00000416529 A2MP01023 1474 aa11.56□□□□□ -0.56
RBM39-209ENST00000416529 DIP2CQ9Y2E4 1556 aa11.55□□□□□ -0.56
RBM39-209ENST00000416529 DPY19L2Q6NUT2 758 aa11.54□□□□□ -0.56
RBM39-209ENST00000416529 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
RBM39-209ENST00000416529 PTPRMP28827 1452 aa11.54□□□□□ -0.56
RBM39-209ENST00000416529 KIF15Q9NS87 1388 aa11.53□□□□□ -0.56
RBM39-209ENST00000416529 DISP3Q9P2K9 1392 aa11.53□□□□□ -0.56
RBM39-209ENST00000416529 HFM1A2PYH4 1435 aa11.52□□□□□ -0.56
RBM39-209ENST00000416529 HSPA2P54652 639 aa11.52□□□□□ -0.57
RBM39-209ENST00000416529 ABCA6Q8N139 1617 aa11.52□□□□□ -0.57
RBM39-209ENST00000416529 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
RBM39-209ENST00000416529 YEATS2Q9ULM3 1422 aa11.52□□□□□ -0.57
RBM39-209ENST00000416529 TRIM26Q12899 539 aaPredicted RBP11.51□□□□□ -0.57
RBM39-209ENST00000416529 ANKRD50Q9ULJ7 1429 aa11.51□□□□□ -0.57
RBM39-209ENST00000416529 NLRP6P59044 892 aa11.49□□□□□ -0.57
RBM39-209ENST00000416529 PPARGC1BQ86YN6 1023 aaKnown RBP11.49□□□□□ -0.57
RBM39-209ENST00000416529 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
RBM39-209ENST00000416529 MADDQ8WXG6 1647 aa11.49□□□□□ -0.57
RBM39-209ENST00000416529 KDM5DQ9BY66 1539 aa11.48□□□□□ -0.57
RBM39-209ENST00000416529 ADAMTSL3P82987 1691 aa11.47□□□□□ -0.57
RBM39-209ENST00000416529 RIMS1Q86UR5 1692 aaKnown RBP11.47□□□□□ -0.57
RBM39-209ENST00000416529 RNF17Q9BXT8 1623 aaKnown RBP11.47□□□□□ -0.57
RBM39-209ENST00000416529 PTPRKQ15262 1439 aa11.47□□□□□ -0.57
RBM39-209ENST00000416529 KANK1Q14678 1352 aa11.47□□□□□ -0.57
RBM39-209ENST00000416529 STK24Q9Y6E0 443 aa11.47□□□□□ -0.57
RBM39-209ENST00000416529 GCC2Q8IWJ2 1684 aa11.46□□□□□ -0.57
RBM39-209ENST00000416529 STK25O00506 426 aa11.46□□□□□ -0.57
RBM39-209ENST00000416529 ILDR2Q71H61 639 aa11.46□□□□□ -0.57
RBM39-209ENST00000416529 NAIPQ13075 1403 aa11.45□□□□□ -0.58
RBM39-209ENST00000416529 RRP7BPQ9NSQ0 103 aa11.45□□□□□ -0.58
RBM39-209ENST00000416529 ZC3H13Q5T200 1668 aaKnown RBP11.45□□□□□ -0.58
RBM39-209ENST00000416529 DEPDC5O75140 1603 aa11.45□□□□□ -0.58
RBM39-209ENST00000416529 KIF3BO15066 747 aa11.44□□□□□ -0.58
RBM39-209ENST00000416529 PKD2Q13563 968 aa11.44□□□□□ -0.58
RBM39-209ENST00000416529 MLECQ14165 292 aa11.44□□□□□ -0.58
RBM39-209ENST00000416529 CDAN1Q8IWY9 1227 aa11.44□□□□□ -0.58
RBM39-209ENST00000416529 MICALL2Q8IY33 904 aa11.44□□□□□ -0.58
RBM39-209ENST00000416529 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
RBM39-209ENST00000416529 ESF1Q9H501 851 aaKnown RBP11.44□□□□□ -0.58
RBM39-209ENST00000416529 PHF8Q9UPP1 1060 aa11.44□□□□□ -0.58
RBM39-209ENST00000416529 PRDM15P57071 1507 aaPredicted RBP11.44□□□□□ -0.58
RBM39-209ENST00000416529 LMTK2Q8IWU2 1503 aa11.44□□□□□ -0.58
RBM39-209ENST00000416529 SETD5Q9C0A6 1442 aa11.43□□□□□ -0.58
RBM39-209ENST00000416529 MROH2AA6NES4 1674 aa11.43□□□□□ -0.58
RBM39-209ENST00000416529 SETD1BQ9UPS6 1966 aaKnown RBP11.43□□□□□ -0.58
RBM39-209ENST00000416529 CHIC2Q9UKJ5 165 aa11.43□□□□□ -0.58
RBM39-209ENST00000416529 ARHGAP31Q2M1Z3 1444 aa11.43□□□□□ -0.58
RBM39-209ENST00000416529 SOCS7O14512 581 aa11.42□□□□□ -0.58
RBM39-209ENST00000416529 DOK7Q18PE1 504 aa11.42□□□□□ -0.58
RBM39-209ENST00000416529 UNC13BO14795 1591 aa11.41□□□□□ -0.58
RBM39-209ENST00000416529 VWDEQ8N2E2 1590 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms