RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 NBPF8Q3BBV2 869 aa14.39□□□□□ -0.11
DEPDC4-203ENST00000416321 IDI1Q13907 227 aa14.37□□□□□ -0.11
DEPDC4-203ENST00000416321 PRAG1Q86YV5 1406 aa14.37□□□□□ -0.11
DEPDC4-203ENST00000416321 RPGRIP1LQ68CZ1 1315 aa14.37□□□□□ -0.11
DEPDC4-203ENST00000416321 RALGAPBQ86X10 1494 aa14.37□□□□□ -0.11
DEPDC4-203ENST00000416321 TNRQ92752 1358 aa14.36□□□□□ -0.11
DEPDC4-203ENST00000416321 MADDQ8WXG6 1647 aa14.35□□□□□ -0.11
DEPDC4-203ENST00000416321 EIF4G2P78344 907 aaKnown RBP eCLIP14.35□□□□□ -0.11
DEPDC4-203ENST00000416321 MYOM2P54296 1465 aa14.35□□□□□ -0.11
DEPDC4-203ENST00000416321 C3P01024 1663 aa14.35□□□□□ -0.11
DEPDC4-203ENST00000416321 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
DEPDC4-203ENST00000416321 RIMS1Q86UR5 1692 aaKnown RBP14.34□□□□□ -0.11
DEPDC4-203ENST00000416321 IFT172Q9UG01 1749 aa14.34□□□□□ -0.11
DEPDC4-203ENST00000416321 TRPM1Q7Z4N2 1603 aa14.33□□□□□ -0.11
DEPDC4-203ENST00000416321 CARD11Q9BXL7 1154 aa14.33□□□□□ -0.12
DEPDC4-203ENST00000416321 TMEM131LA2VDJ0 1609 aa14.33□□□□□ -0.12
DEPDC4-203ENST00000416321 PPLO60437 1756 aa14.32□□□□□ -0.12
DEPDC4-203ENST00000416321 ADAMTSL3P82987 1691 aa14.32□□□□□ -0.12
DEPDC4-203ENST00000416321 VGFO15240 615 aaPredicted RBP14.31□□□□□ -0.12
DEPDC4-203ENST00000416321 MYO5BQ9ULV0 1848 aa14.31□□□□□ -0.12
DEPDC4-203ENST00000416321 CEBPAP49715 358 aaPredicted RBP14.3□□□□□ -0.12
DEPDC4-203ENST00000416321 NLRP1Q9C000 1473 aa14.3□□□□□ -0.12
DEPDC4-203ENST00000416321 HSPA5P11021 654 aaKnown RBP14.29□□□□□ -0.12
DEPDC4-203ENST00000416321 USP47Q96K76 1375 aa14.29□□□□□ -0.12
DEPDC4-203ENST00000416321 NEXMIFQ5QGS0 1516 aa14.29□□□□□ -0.12
DEPDC4-203ENST00000416321 KIAA1210Q9ULL0 1709 aa14.29□□□□□ -0.12
DEPDC4-203ENST00000416321 LAMC1P11047 1609 aa14.28□□□□□ -0.12
DEPDC4-203ENST00000416321 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
DEPDC4-203ENST00000416321 KDM5AP29375 1690 aaKnown RBP14.27□□□□□ -0.12
DEPDC4-203ENST00000416321 A2ML1A8K2U0 1454 aa14.27□□□□□ -0.12
DEPDC4-203ENST00000416321 ADGRF5Q8IZF2 1346 aa14.27□□□□□ -0.12
DEPDC4-203ENST00000416321 HDGFP51858 240 aaKnown RBP14.27□□□□□ -0.13
DEPDC4-203ENST00000416321 NRXN1Q9ULB1 1477 aa14.26□□□□□ -0.13
DEPDC4-203ENST00000416321 GPRASP1Q5JY77 1395 aa14.26□□□□□ -0.13
DEPDC4-203ENST00000416321 ZFYVE9O95405 1425 aa14.25□□□□□ -0.13
DEPDC4-203ENST00000416321 NUTM2DQ5VT03 806 aaPredicted RBP14.25□□□□□ -0.13
DEPDC4-203ENST00000416321 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.25□□□□□ -0.13
DEPDC4-203ENST00000416321 PIK3C2GO75747 1445 aa14.24□□□□□ -0.13
DEPDC4-203ENST00000416321 RIMS2Q9UQ26 1411 aa14.24□□□□□ -0.13
DEPDC4-203ENST00000416321 UBR1Q8IWV7 1749 aa14.24□□□□□ -0.13
DEPDC4-203ENST00000416321 MYO3AQ8NEV4 1616 aa14.24□□□□□ -0.13
DEPDC4-203ENST00000416321 NBPF1Q3BBV0 1214 aa14.24□□□□□ -0.13
DEPDC4-203ENST00000416321 CFAP70Q5T0N1 1121 aa14.23□□□□□ -0.13
DEPDC4-203ENST00000416321 DIEXFQ68CQ4 756 aaKnown RBP14.23□□□□□ -0.13
DEPDC4-203ENST00000416321 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
DEPDC4-203ENST00000416321 SCAF11Q99590 1463 aaKnown RBP14.21□□□□□ -0.13
DEPDC4-203ENST00000416321 SETBP1Q9Y6X0 1596 aa14.21□□□□□ -0.14
DEPDC4-203ENST00000416321 C14orf93Q9H972 538 aaKnown RBP14.2□□□□□ -0.14
DEPDC4-203ENST00000416321 TMEM2Q9UHN6 1383 aa14.2□□□□□ -0.14
DEPDC4-203ENST00000416321 PTPRMP28827 1452 aa14.19□□□□□ -0.14
DEPDC4-203ENST00000416321 CEP170BQ9Y4F5 1589 aaPredicted RBP14.19□□□□□ -0.14
DEPDC4-203ENST00000416321 THEMISQ8N1K5 641 aaPredicted RBP14.19□□□□□ -0.14
DEPDC4-203ENST00000416321 BCANQ96GW7 911 aa14.19□□□□□ -0.14
DEPDC4-203ENST00000416321 EID1Q9Y6B2 187 aa14.19□□□□□ -0.14
DEPDC4-203ENST00000416321 IQGAP1P46940 1657 aa14.19□□□□□ -0.14
DEPDC4-203ENST00000416321 ST20-MTHFSA0A0A6YYL1 179 aa14.18□□□□□ -0.14
DEPDC4-203ENST00000416321 SETD1BQ9UPS6 1966 aaKnown RBP14.17□□□□□ -0.14
DEPDC4-203ENST00000416321 C1QBPQ07021 282 aaKnown RBP14.17□□□□□ -0.14
DEPDC4-203ENST00000416321 POLR1AO95602 1720 aaPredicted RBP14.16□□□□□ -0.14
DEPDC4-203ENST00000416321 ZNF142P52746 1687 aaPredicted RBP14.16□□□□□ -0.14
DEPDC4-203ENST00000416321 TXNDC2Q86VQ3 553 aa14.15□□□□□ -0.14
DEPDC4-203ENST00000416321 POLR3GLQ9BT43 218 aa14.15□□□□□ -0.14
DEPDC4-203ENST00000416321 SLIT1O75093 1534 aa14.15□□□□□ -0.14
DEPDC4-203ENST00000416321 CCDC7Q96M83 1385 aa14.14□□□□□ -0.15
DEPDC4-203ENST00000416321 SLC24A1O60721 1099 aa14.14□□□□□ -0.15
DEPDC4-203ENST00000416321 DDX10Q13206 875 aaKnown RBP14.14□□□□□ -0.15
DEPDC4-203ENST00000416321 ALKQ9UM73 1620 aa14.14□□□□□ -0.15
DEPDC4-203ENST00000416321 ADGRB1O14514 1584 aa14.13□□□□□ -0.15
DEPDC4-203ENST00000416321 TMF1P82094 1093 aa14.13□□□□□ -0.15
DEPDC4-203ENST00000416321 TMEM132EQ6IEE7 984 aa14.13□□□□□ -0.15
DEPDC4-203ENST00000416321 WASHC2AQ641Q2 1341 aa14.13□□□□□ -0.15
DEPDC4-203ENST00000416321 ARHGAP23Q9P227 1491 aa14.12□□□□□ -0.15
DEPDC4-203ENST00000416321 PLEKHG1Q9ULL1 1385 aa14.12□□□□□ -0.15
DEPDC4-203ENST00000416321 TRAK1Q9UPV9 953 aa14.12□□□□□ -0.15
DEPDC4-203ENST00000416321 KIF7Q2M1P5 1343 aa14.12□□□□□ -0.15
DEPDC4-203ENST00000416321 CENPJQ9HC77 1338 aaPredicted RBP14.11□□□□□ -0.15
DEPDC4-203ENST00000416321 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
DEPDC4-203ENST00000416321 YTHDC2Q9H6S0 1430 aaKnown RBP14.09□□□□□ -0.15
DEPDC4-203ENST00000416321 STK26Q9P289 416 aa14.09□□□□□ -0.15
DEPDC4-203ENST00000416321 NRXN3Q9Y4C0 1643 aa14.08□□□□□ -0.15
DEPDC4-203ENST00000416321 C11orf95C9JLR9 678 aaPredicted RBP14.08□□□□□ -0.16
DEPDC4-203ENST00000416321 LTKP29376 864 aa14.08□□□□□ -0.16
DEPDC4-203ENST00000416321 ANKLE2Q86XL3 938 aa14.08□□□□□ -0.16
DEPDC4-203ENST00000416321 ASXL1Q8IXJ9 1541 aa14.08□□□□□ -0.16
DEPDC4-203ENST00000416321 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
DEPDC4-203ENST00000416321 TESK2Q96S53 571 aa14.07□□□□□ -0.16
DEPDC4-203ENST00000416321 QRICH2Q9H0J4 1663 aa14.07□□□□□ -0.16
DEPDC4-203ENST00000416321 SETD1AO15047 1707 aaKnown RBP14.07□□□□□ -0.16
DEPDC4-203ENST00000416321 DIP2AQ14689 1571 aa14.06□□□□□ -0.16
DEPDC4-203ENST00000416321 POGKQ9P215 609 aa14.06□□□□□ -0.16
DEPDC4-203ENST00000416321 LRPPRCP42704 1394 aaKnown RBP14.06□□□□□ -0.16
DEPDC4-203ENST00000416321 SBNO2Q9Y2G9 1366 aa14.06□□□□□ -0.16
DEPDC4-203ENST00000416321 KDM4FA0A1W2PPD8 638 aa14.05□□□□□ -0.16
DEPDC4-203ENST00000416321 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
DEPDC4-203ENST00000416321 ADAMTS13Q76LX8 1427 aa14.04□□□□□ -0.16
DEPDC4-203ENST00000416321 DLC1Q96QB1 1528 aa14.04□□□□□ -0.16
DEPDC4-203ENST00000416321 METP08581 1390 aa14.03□□□□□ -0.16
DEPDC4-203ENST00000416321 KNDC1Q76NI1 1749 aa14.02□□□□□ -0.16
DEPDC4-203ENST00000416321 ABCC11Q96J66 1382 aa14.02□□□□□ -0.17
DEPDC4-203ENST00000416321 ANP32CO43423 234 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms