RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 ADGRB3O60242 1522 aa16.33■□□□□ 0.2
LMCD1-203ENST00000415597 RIMS2Q9UQ26 1411 aa16.31■□□□□ 0.2
LMCD1-203ENST00000415597 TET3O43151 1660 aa16.3■□□□□ 0.2
LMCD1-203ENST00000415597 MSH6P52701 1360 aa16.3■□□□□ 0.2
LMCD1-203ENST00000415597 PLEKHG1Q9ULL1 1385 aa16.3■□□□□ 0.2
LMCD1-203ENST00000415597 C14orf37Q86TY3 774 aa16.3■□□□□ 0.2
LMCD1-203ENST00000415597 TBX22Q9Y458 520 aa16.3■□□□□ 0.2
LMCD1-203ENST00000415597 STRCP1A6NGW2 1772 aa16.3■□□□□ 0.2
LMCD1-203ENST00000415597 FAM135BQ49AJ0 1406 aa16.28■□□□□ 0.2
LMCD1-203ENST00000415597 MED1Q15648 1581 aaPredicted RBP16.26■□□□□ 0.19
LMCD1-203ENST00000415597 RBM33Q96EV2 1170 aaKnown RBP16.26■□□□□ 0.19
LMCD1-203ENST00000415597 NKTRP30414 1462 aaKnown RBP16.26■□□□□ 0.19
LMCD1-203ENST00000415597 UNC13BO14795 1591 aa16.26■□□□□ 0.19
LMCD1-203ENST00000415597 GCC2Q8IWJ2 1684 aa16.25■□□□□ 0.19
LMCD1-203ENST00000415597 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
LMCD1-203ENST00000415597 NUTM2DQ5VT03 806 aaPredicted RBP16.25■□□□□ 0.19
LMCD1-203ENST00000415597 SLAIN2Q9P270 581 aa16.25■□□□□ 0.19
LMCD1-203ENST00000415597 ALKQ9UM73 1620 aa16.24■□□□□ 0.19
LMCD1-203ENST00000415597 ZFYVE9O95405 1425 aa16.24■□□□□ 0.19
LMCD1-203ENST00000415597 ATF3P18847 181 aa16.22■□□□□ 0.19
LMCD1-203ENST00000415597 PIK3R4Q99570 1358 aa16.22■□□□□ 0.19
LMCD1-203ENST00000415597 NCOA3Q9Y6Q9 1424 aa16.21■□□□□ 0.19
LMCD1-203ENST00000415597 TMEM131LA2VDJ0 1609 aa16.21■□□□□ 0.19
LMCD1-203ENST00000415597 IQGAP3Q86VI3 1631 aa16.21■□□□□ 0.19
LMCD1-203ENST00000415597 CADPS2Q86UW7 1296 aa16.21■□□□□ 0.19
LMCD1-203ENST00000415597 TRIM52Q96A61 297 aa16.21■□□□□ 0.19
LMCD1-203ENST00000415597 C19orf44Q9H6X5 657 aa16.2■□□□□ 0.18
LMCD1-203ENST00000415597 AMOTL2Q9Y2J4 779 aa16.19■□□□□ 0.18
LMCD1-203ENST00000415597 E9PCH4 1651 aa16.18■□□□□ 0.18
LMCD1-203ENST00000415597 NWD1Q149M9 1564 aa16.17■□□□□ 0.18
LMCD1-203ENST00000415597 XIRP1Q702N8 1843 aaKnown RBP16.15■□□□□ 0.18
LMCD1-203ENST00000415597 DIP2AQ14689 1571 aa16.15■□□□□ 0.18
LMCD1-203ENST00000415597 RRBP1Q9P2E9 1410 aaKnown RBP16.15■□□□□ 0.18
LMCD1-203ENST00000415597 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
LMCD1-203ENST00000415597 ADAMTS13Q76LX8 1427 aa16.14■□□□□ 0.17
LMCD1-203ENST00000415597 CHD2O14647 1828 aaKnown RBP16.13■□□□□ 0.17
LMCD1-203ENST00000415597 VGFO15240 615 aaPredicted RBP16.13■□□□□ 0.17
LMCD1-203ENST00000415597 SLC4A1APQ9BWU0 796 aaKnown RBP16.13■□□□□ 0.17
LMCD1-203ENST00000415597 TRPM2O94759 1503 aa16.13■□□□□ 0.17
LMCD1-203ENST00000415597 JCADQ9P266 1359 aa16.13■□□□□ 0.17
LMCD1-203ENST00000415597 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
LMCD1-203ENST00000415597 NAIPQ13075 1403 aa16.11■□□□□ 0.17
LMCD1-203ENST00000415597 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
LMCD1-203ENST00000415597 RPGRIP1LQ68CZ1 1315 aa16.08■□□□□ 0.16
LMCD1-203ENST00000415597 SPATA31A6Q5VVP1 1343 aa16.07■□□□□ 0.16
LMCD1-203ENST00000415597 ACIN1Q9UKV3 1341 aaKnown RBP16.07■□□□□ 0.16
LMCD1-203ENST00000415597 SPHKAPQ2M3C7 1700 aa16.07■□□□□ 0.16
LMCD1-203ENST00000415597 HFM1A2PYH4 1435 aa16.06■□□□□ 0.16
LMCD1-203ENST00000415597 RGS17Q9UGC6 210 aaPredicted RBP16.06■□□□□ 0.16
LMCD1-203ENST00000415597 PHLPP1O60346 1717 aa16.05■□□□□ 0.16
LMCD1-203ENST00000415597 DCCP43146 1447 aa16.04■□□□□ 0.16
LMCD1-203ENST00000415597 PTPRUQ92729 1446 aa16.03■□□□□ 0.16
LMCD1-203ENST00000415597 ZNF772Q68DY9 489 aaPredicted RBP16.03■□□□□ 0.16
LMCD1-203ENST00000415597 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
LMCD1-203ENST00000415597 SETBP1Q9Y6X0 1596 aa16.03■□□□□ 0.16
LMCD1-203ENST00000415597 METP08581 1390 aa16.02■□□□□ 0.16
LMCD1-203ENST00000415597 POTEAQ6S8J7 498 aa16.02■□□□□ 0.16
LMCD1-203ENST00000415597 LRRC59Q96AG4 307 aaKnown RBP16.02■□□□□ 0.16
LMCD1-203ENST00000415597 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.01■□□□□ 0.15
LMCD1-203ENST00000415597 KIF1BO60333 1816 aa16■□□□□ 0.15
LMCD1-203ENST00000415597 NUTM2BA6NNL0 878 aaPredicted RBP15.99■□□□□ 0.15
LMCD1-203ENST00000415597 NUTM2EB1AL46 878 aaPredicted RBP15.99■□□□□ 0.15
LMCD1-203ENST00000415597 NUTM2AQ8IVF1 878 aaPredicted RBP15.99■□□□□ 0.15
LMCD1-203ENST00000415597 CLTCL1P53675 1640 aa15.98■□□□□ 0.15
LMCD1-203ENST00000415597 CCDC144AA2RUR9 1427 aa15.97■□□□□ 0.15
LMCD1-203ENST00000415597 RGL3Q3MIN7 710 aa15.97■□□□□ 0.15
LMCD1-203ENST00000415597 MPHOSPH9Q99550 1183 aa15.97■□□□□ 0.15
LMCD1-203ENST00000415597 NEXMIFQ5QGS0 1516 aa15.97■□□□□ 0.15
LMCD1-203ENST00000415597 ADGRL3Q9HAR2 1447 aa15.96■□□□□ 0.15
LMCD1-203ENST00000415597 AHDC1Q5TGY3 1603 aaPredicted RBP15.96■□□□□ 0.15
LMCD1-203ENST00000415597 FOXD1Q16676 465 aa15.95■□□□□ 0.14
LMCD1-203ENST00000415597 MST1RQ04912 1400 aa15.94■□□□□ 0.14
LMCD1-203ENST00000415597 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
LMCD1-203ENST00000415597 NRXN3Q9Y4C0 1643 aa15.94■□□□□ 0.14
LMCD1-203ENST00000415597 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
LMCD1-203ENST00000415597 ANKRD30BQ9BXX2 1392 aa15.93■□□□□ 0.14
LMCD1-203ENST00000415597 RXRBP28702 533 aa15.92■□□□□ 0.14
LMCD1-203ENST00000415597 ASXL1Q8IXJ9 1541 aa15.92■□□□□ 0.14
LMCD1-203ENST00000415597 PTCH1Q13635 1447 aa15.92■□□□□ 0.14
LMCD1-203ENST00000415597 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
LMCD1-203ENST00000415597 STK26Q9P289 416 aa15.9■□□□□ 0.14
LMCD1-203ENST00000415597 ROBO2Q9HCK4 1378 aa15.89■□□□□ 0.13
LMCD1-203ENST00000415597 C1orf167Q5SNV9 1468 aa15.89■□□□□ 0.13
LMCD1-203ENST00000415597 ESCO1Q5FWF5 840 aa15.88■□□□□ 0.13
LMCD1-203ENST00000415597 DDX17Q92841 729 aaKnown RBP15.88■□□□□ 0.13
LMCD1-203ENST00000415597 NGLY1Q96IV0 654 aa15.88■□□□□ 0.13
LMCD1-203ENST00000415597 C8orf37Q96NL8 207 aa15.88■□□□□ 0.13
LMCD1-203ENST00000415597 ORAI2Q96SN7 254 aa15.88■□□□□ 0.13
LMCD1-203ENST00000415597 SHPRHQ149N8 1683 aa15.88■□□□□ 0.13
LMCD1-203ENST00000415597 ADGRF5Q8IZF2 1346 aa15.88■□□□□ 0.13
LMCD1-203ENST00000415597 AFF2P51816 1311 aa15.87■□□□□ 0.13
LMCD1-203ENST00000415597 LRP6O75581 1613 aa15.86■□□□□ 0.13
LMCD1-203ENST00000415597 NPHP3Q7Z494 1330 aa15.86■□□□□ 0.13
LMCD1-203ENST00000415597 LRPPRCP42704 1394 aaKnown RBP15.86■□□□□ 0.13
LMCD1-203ENST00000415597 PNPLA6Q8IY17 1366 aa15.85■□□□□ 0.13
LMCD1-203ENST00000415597 PRAG1Q86YV5 1406 aa15.85■□□□□ 0.13
LMCD1-203ENST00000415597 ADAMTS2O95450 1211 aa15.84■□□□□ 0.13
LMCD1-203ENST00000415597 QTRT2Q9H974 415 aaKnown RBP15.84■□□□□ 0.13
LMCD1-203ENST00000415597 SOS2Q07890 1332 aaPredicted RBP15.84■□□□□ 0.13
LMCD1-203ENST00000415597 RBM6P78332 1123 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms