RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 UNC13BO14795 1591 aa14.64□□□□□ -0.07
LINC01090-201ENST00000415357 NEURL4Q96JN8 1562 aa14.64□□□□□ -0.07
LINC01090-201ENST00000415357 POLR1AO95602 1720 aaPredicted RBP14.63□□□□□ -0.07
LINC01090-201ENST00000415357 PITPNM1O00562 1244 aa14.63□□□□□ -0.07
LINC01090-201ENST00000415357 PKD2Q13563 968 aa14.63□□□□□ -0.07
LINC01090-201ENST00000415357 UBR1Q8IWV7 1749 aa14.61□□□□□ -0.07
LINC01090-201ENST00000415357 SYNMO15061 1565 aa14.61□□□□□ -0.07
LINC01090-201ENST00000415357 CERKQ8TCT0 537 aa14.61□□□□□ -0.07
LINC01090-201ENST00000415357 TET3O43151 1660 aa14.61□□□□□ -0.07
LINC01090-201ENST00000415357 PIK3C2BO00750 1634 aa14.6□□□□□ -0.07
LINC01090-201ENST00000415357 LTBP4Q8N2S1 1624 aa14.6□□□□□ -0.07
LINC01090-201ENST00000415357 THEMISQ8N1K5 641 aaPredicted RBP14.6□□□□□ -0.07
LINC01090-201ENST00000415357 FBXO41Q8TF61 875 aa14.6□□□□□ -0.07
LINC01090-201ENST00000415357 ZNF335Q9H4Z2 1342 aaPredicted RBP14.59□□□□□ -0.07
LINC01090-201ENST00000415357 IQGAP3Q86VI3 1631 aa14.59□□□□□ -0.07
LINC01090-201ENST00000415357 NOS1P29475 1434 aa14.58□□□□□ -0.07
LINC01090-201ENST00000415357 GCC2Q8IWJ2 1684 aa14.58□□□□□ -0.08
LINC01090-201ENST00000415357 ANKLE2Q86XL3 938 aa14.57□□□□□ -0.08
LINC01090-201ENST00000415357 E9PCH4 1651 aa14.56□□□□□ -0.08
LINC01090-201ENST00000415357 STAG3Q9UJ98 1225 aa14.56□□□□□ -0.08
LINC01090-201ENST00000415357 NUP155O75694 1391 aa14.56□□□□□ -0.08
LINC01090-201ENST00000415357 NPHP4O75161 1426 aaPredicted RBP14.56□□□□□ -0.08
LINC01090-201ENST00000415357 NAIPQ13075 1403 aa14.56□□□□□ -0.08
LINC01090-201ENST00000415357 RPRD2Q5VT52 1461 aaKnown RBP14.56□□□□□ -0.08
LINC01090-201ENST00000415357 IDI1Q13907 227 aa14.55□□□□□ -0.08
LINC01090-201ENST00000415357 MED14O60244 1454 aa14.54□□□□□ -0.08
LINC01090-201ENST00000415357 ARHGAP23Q9P227 1491 aa14.54□□□□□ -0.08
LINC01090-201ENST00000415357 ADGRB3O60242 1522 aa14.54□□□□□ -0.08
LINC01090-201ENST00000415357 SLIT1O75093 1534 aa14.54□□□□□ -0.08
LINC01090-201ENST00000415357 IQGAP1P46940 1657 aa14.54□□□□□ -0.08
LINC01090-201ENST00000415357 SCAF11Q99590 1463 aaKnown RBP14.53□□□□□ -0.08
LINC01090-201ENST00000415357 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
LINC01090-201ENST00000415357 LTKP29376 864 aa14.52□□□□□ -0.09
LINC01090-201ENST00000415357 TMEM2Q9UHN6 1383 aa14.51□□□□□ -0.09
LINC01090-201ENST00000415357 KDM5AP29375 1690 aaKnown RBP14.51□□□□□ -0.09
LINC01090-201ENST00000415357 HFM1A2PYH4 1435 aa14.5□□□□□ -0.09
LINC01090-201ENST00000415357 TXNDC2Q86VQ3 553 aa14.5□□□□□ -0.09
LINC01090-201ENST00000415357 CHRDL2Q6WN34 429 aa14.49□□□□□ -0.09
LINC01090-201ENST00000415357 SLC52A1Q9NWF4 448 aa14.49□□□□□ -0.09
LINC01090-201ENST00000415357 MYO5BQ9ULV0 1848 aa14.48□□□□□ -0.09
LINC01090-201ENST00000415357 PRR29P0C7W0 189 aa14.47□□□□□ -0.09
LINC01090-201ENST00000415357 TMEM131LA2VDJ0 1609 aa14.47□□□□□ -0.09
LINC01090-201ENST00000415357 IQSEC2Q5JU85 1478 aa14.46□□□□□ -0.09
LINC01090-201ENST00000415357 EID1Q9Y6B2 187 aa14.46□□□□□ -0.09
LINC01090-201ENST00000415357 SPHKAPQ2M3C7 1700 aa14.46□□□□□ -0.1
LINC01090-201ENST00000415357 STRCP1A6NGW2 1772 aa14.45□□□□□ -0.1
LINC01090-201ENST00000415357 CHGAP10645 457 aaKnown RBP14.45□□□□□ -0.1
LINC01090-201ENST00000415357 CPS1P31327 1500 aa14.45□□□□□ -0.1
LINC01090-201ENST00000415357 TRIM52Q96A61 297 aa14.44□□□□□ -0.1
LINC01090-201ENST00000415357 ZFYVE9O95405 1425 aa14.43□□□□□ -0.1
LINC01090-201ENST00000415357 RIMS2Q9UQ26 1411 aa14.43□□□□□ -0.1
LINC01090-201ENST00000415357 UBAP1LF5GYI3 381 aa14.4□□□□□ -0.1
LINC01090-201ENST00000415357 NUTM2DQ5VT03 806 aaPredicted RBP14.4□□□□□ -0.1
LINC01090-201ENST00000415357 SLC26A8Q96RN1 970 aa14.4□□□□□ -0.1
LINC01090-201ENST00000415357 CLTCL1P53675 1640 aa14.4□□□□□ -0.1
LINC01090-201ENST00000415357 TRPM2O94759 1503 aa14.4□□□□□ -0.1
LINC01090-201ENST00000415357 LRRC7Q96NW7 1537 aa14.39□□□□□ -0.11
LINC01090-201ENST00000415357 PPP1R15AO75807 674 aaPredicted RBP14.38□□□□□ -0.11
LINC01090-201ENST00000415357 BCANQ96GW7 911 aa14.38□□□□□ -0.11
LINC01090-201ENST00000415357 PLEKHG1Q9ULL1 1385 aa14.37□□□□□ -0.11
LINC01090-201ENST00000415357 VASPP50552 380 aaPredicted RBP14.37□□□□□ -0.11
LINC01090-201ENST00000415357 ALKQ9UM73 1620 aa14.34□□□□□ -0.11
LINC01090-201ENST00000415357 SETD5Q9C0A6 1442 aa14.34□□□□□ -0.11
LINC01090-201ENST00000415357 ZNF326Q5BKZ1 582 aaKnown RBP14.33□□□□□ -0.12
LINC01090-201ENST00000415357 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.33□□□□□ -0.12
LINC01090-201ENST00000415357 XIRP1Q702N8 1843 aaKnown RBP14.33□□□□□ -0.12
LINC01090-201ENST00000415357 NWD1Q149M9 1564 aa14.33□□□□□ -0.12
LINC01090-201ENST00000415357 ADAMTS13Q76LX8 1427 aa14.32□□□□□ -0.12
LINC01090-201ENST00000415357 HDGFP51858 240 aaKnown RBP14.32□□□□□ -0.12
LINC01090-201ENST00000415357 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
LINC01090-201ENST00000415357 MIER1Q8N108 512 aa14.32□□□□□ -0.12
LINC01090-201ENST00000415357 PLCD3Q8N3E9 789 aa14.32□□□□□ -0.12
LINC01090-201ENST00000415357 RAB3GAP2Q9H2M9 1393 aa14.32□□□□□ -0.12
LINC01090-201ENST00000415357 KIF1BO60333 1816 aa14.31□□□□□ -0.12
LINC01090-201ENST00000415357 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
LINC01090-201ENST00000415357 KCNA6P17658 529 aa14.31□□□□□ -0.12
LINC01090-201ENST00000415357 FXR2P51116 673 aaKnown RBP eCLIP14.31□□□□□ -0.12
LINC01090-201ENST00000415357 RBM33Q96EV2 1170 aaKnown RBP14.31□□□□□ -0.12
LINC01090-201ENST00000415357 PIP4P2Q8N4L2 257 aa14.3□□□□□ -0.12
LINC01090-201ENST00000415357 MPHOSPH9Q99550 1183 aa14.3□□□□□ -0.12
LINC01090-201ENST00000415357 TMEM94Q12767 1356 aa14.3□□□□□ -0.12
LINC01090-201ENST00000415357 NRXN3Q9Y4C0 1643 aa14.3□□□□□ -0.12
LINC01090-201ENST00000415357 TOM1O60784 492 aa14.29□□□□□ -0.12
LINC01090-201ENST00000415357 CHADLQ6NUI6 762 aa14.29□□□□□ -0.12
LINC01090-201ENST00000415357 NKTRP30414 1462 aaKnown RBP14.29□□□□□ -0.12
LINC01090-201ENST00000415357 DIP2AQ14689 1571 aa14.29□□□□□ -0.12
LINC01090-201ENST00000415357 CHD2O14647 1828 aaKnown RBP14.29□□□□□ -0.12
LINC01090-201ENST00000415357 PROSER2Q86WR7 435 aaPredicted RBP14.28□□□□□ -0.12
LINC01090-201ENST00000415357 TBX22Q9Y458 520 aa14.28□□□□□ -0.12
LINC01090-201ENST00000415357 SETBP1Q9Y6X0 1596 aa14.27□□□□□ -0.12
LINC01090-201ENST00000415357 CREBZFQ9NS37 354 aa14.27□□□□□ -0.13
LINC01090-201ENST00000415357 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
LINC01090-201ENST00000415357 CCDC144AA2RUR9 1427 aa14.25□□□□□ -0.13
LINC01090-201ENST00000415357 PTPRUQ92729 1446 aa14.25□□□□□ -0.13
LINC01090-201ENST00000415357 PLEKHG5O94827 1062 aa14.25□□□□□ -0.13
LINC01090-201ENST00000415357 HSPA1LP34931 641 aa14.24□□□□□ -0.13
LINC01090-201ENST00000415357 PPLO60437 1756 aa14.23□□□□□ -0.13
LINC01090-201ENST00000415357 METP08581 1390 aa14.22□□□□□ -0.13
LINC01090-201ENST00000415357 PIK3R4Q99570 1358 aa14.22□□□□□ -0.13
LINC01090-201ENST00000415357 SPATA31E1Q6ZUB1 1445 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms