RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.03□□□□□ -0.16
LINC01888-201ENST00000415138 YEATS2Q9ULM3 1422 aa14.03□□□□□ -0.16
LINC01888-201ENST00000415138 ABCA6Q8N139 1617 aa14.02□□□□□ -0.16
LINC01888-201ENST00000415138 MAST1Q9Y2H9 1570 aa14.02□□□□□ -0.16
LINC01888-201ENST00000415138 C9orf84Q5VXU9 1444 aa14.02□□□□□ -0.16
LINC01888-201ENST00000415138 RRBP1Q9P2E9 1410 aaKnown RBP14.02□□□□□ -0.16
LINC01888-201ENST00000415138 MAMSTRQ6ZN01 415 aa14.02□□□□□ -0.17
LINC01888-201ENST00000415138 ANP32EQ9BTT0 268 aa14.02□□□□□ -0.17
LINC01888-201ENST00000415138 DIP2CQ9Y2E4 1556 aa14.01□□□□□ -0.17
LINC01888-201ENST00000415138 ABCC5O15440 1437 aa14.01□□□□□ -0.17
LINC01888-201ENST00000415138 SHANK2Q9UPX8 1470 aa14□□□□□ -0.17
LINC01888-201ENST00000415138 ANKRD30AQ9BXX3 1397 aa14□□□□□ -0.17
LINC01888-201ENST00000415138 POTEFA5A3E0 1075 aa14□□□□□ -0.17
LINC01888-201ENST00000415138 ESF1Q9H501 851 aaKnown RBP13.99□□□□□ -0.17
LINC01888-201ENST00000415138 COLQQ9Y215 455 aaPredicted RBP13.99□□□□□ -0.17
LINC01888-201ENST00000415138 RRP7BPQ9NSQ0 103 aa13.98□□□□□ -0.17
LINC01888-201ENST00000415138 A2MP01023 1474 aa13.98□□□□□ -0.17
LINC01888-201ENST00000415138 PLXNC1O60486 1568 aa13.97□□□□□ -0.17
LINC01888-201ENST00000415138 POTEJP0CG39 1038 aa13.97□□□□□ -0.17
LINC01888-201ENST00000415138 MLECQ14165 292 aa13.97□□□□□ -0.17
LINC01888-201ENST00000415138 REREQ9P2R6 1566 aa13.96□□□□□ -0.17
LINC01888-201ENST00000415138 SCUBE2Q9NQ36 999 aa13.96□□□□□ -0.17
LINC01888-201ENST00000415138 DHX29Q7Z478 1369 aaKnown RBP13.95□□□□□ -0.18
LINC01888-201ENST00000415138 DUOX2Q9NRD8 1548 aa13.95□□□□□ -0.18
LINC01888-201ENST00000415138 KIF15Q9NS87 1388 aa13.94□□□□□ -0.18
LINC01888-201ENST00000415138 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
LINC01888-201ENST00000415138 KIF3BO15066 747 aa13.93□□□□□ -0.18
LINC01888-201ENST00000415138 PLCG2P16885 1265 aa13.93□□□□□ -0.18
LINC01888-201ENST00000415138 GGT6Q6P531 493 aa13.93□□□□□ -0.18
LINC01888-201ENST00000415138 NCOA1Q15788 1441 aa13.92□□□□□ -0.18
LINC01888-201ENST00000415138 AGLP35573 1532 aa13.92□□□□□ -0.18
LINC01888-201ENST00000415138 PSEN1P49768 467 aa13.92□□□□□ -0.18
LINC01888-201ENST00000415138 ADGRL2O95490 1459 aa13.92□□□□□ -0.18
LINC01888-201ENST00000415138 FER1L4A9Z1Z3 1794 aa13.91□□□□□ -0.18
LINC01888-201ENST00000415138 EIF2AK4Q9P2K8 1649 aaKnown RBP13.91□□□□□ -0.18
LINC01888-201ENST00000415138 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
LINC01888-201ENST00000415138 ROCK1Q13464 1354 aa13.91□□□□□ -0.18
LINC01888-201ENST00000415138 SIGLEC1Q9BZZ2 1709 aa13.9□□□□□ -0.18
LINC01888-201ENST00000415138 ILDR1Q86SU0 546 aaPredicted RBP13.9□□□□□ -0.18
LINC01888-201ENST00000415138 PTPRKQ15262 1439 aa13.89□□□□□ -0.19
LINC01888-201ENST00000415138 ERBINQ96RT1 1412 aa13.89□□□□□ -0.19
LINC01888-201ENST00000415138 PDAP1Q13442 181 aaKnown RBP13.88□□□□□ -0.19
LINC01888-201ENST00000415138 KANK1Q14678 1352 aa13.87□□□□□ -0.19
LINC01888-201ENST00000415138 IRX5P78411 483 aaPredicted RBP13.87□□□□□ -0.19
LINC01888-201ENST00000415138 ADAMTSL3P82987 1691 aa13.87□□□□□ -0.19
LINC01888-201ENST00000415138 RIMS1Q86UR5 1692 aaKnown RBP13.87□□□□□ -0.19
LINC01888-201ENST00000415138 ANKRD50Q9ULJ7 1429 aa13.87□□□□□ -0.19
LINC01888-201ENST00000415138 MKRN3Q13064 507 aaKnown RBP13.86□□□□□ -0.19
LINC01888-201ENST00000415138 OCEL1Q9H607 264 aa13.86□□□□□ -0.19
LINC01888-201ENST00000415138 WASHC2CQ9Y4E1 1318 aa13.86□□□□□ -0.19
LINC01888-201ENST00000415138 MADDQ8WXG6 1647 aa13.86□□□□□ -0.19
LINC01888-201ENST00000415138 GCC2Q8IWJ2 1684 aa13.85□□□□□ -0.19
LINC01888-201ENST00000415138 TRIM26Q12899 539 aaPredicted RBP13.85□□□□□ -0.19
LINC01888-201ENST00000415138 UBE2Q2Q8WVN8 375 aa13.85□□□□□ -0.19
LINC01888-201ENST00000415138 CLTCQ00610 1675 aaKnown RBP13.85□□□□□ -0.19
LINC01888-201ENST00000415138 CNTLNQ9NXG0 1405 aa13.83□□□□□ -0.2
LINC01888-201ENST00000415138 KDM4FA0A1W2PPD8 638 aa13.83□□□□□ -0.2
LINC01888-201ENST00000415138 RNF17Q9BXT8 1623 aaKnown RBP13.82□□□□□ -0.2
LINC01888-201ENST00000415138 ZC3H13Q5T200 1668 aaKnown RBP13.82□□□□□ -0.2
LINC01888-201ENST00000415138 TRIM52Q96A61 297 aa13.81□□□□□ -0.2
LINC01888-201ENST00000415138 GTF3C3Q9Y5Q9 886 aa13.81□□□□□ -0.2
LINC01888-201ENST00000415138 CFAP65Q6ZU64 1925 aaKnown RBP13.81□□□□□ -0.2
LINC01888-201ENST00000415138 MROH2AA6NES4 1674 aa13.81□□□□□ -0.2
LINC01888-201ENST00000415138 CEP152O94986 1710 aa13.81□□□□□ -0.2
LINC01888-201ENST00000415138 HFM1A2PYH4 1435 aa13.8□□□□□ -0.2
LINC01888-201ENST00000415138 NAIPQ13075 1403 aa13.8□□□□□ -0.2
LINC01888-201ENST00000415138 FAM135AQ9P2D6 1515 aa13.8□□□□□ -0.2
LINC01888-201ENST00000415138 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
LINC01888-201ENST00000415138 KDM5DQ9BY66 1539 aa13.79□□□□□ -0.2
LINC01888-201ENST00000415138 SETD5Q9C0A6 1442 aa13.78□□□□□ -0.2
LINC01888-201ENST00000415138 C3P01024 1663 aa13.78□□□□□ -0.2
LINC01888-201ENST00000415138 PTPRMP28827 1452 aa13.77□□□□□ -0.21
LINC01888-201ENST00000415138 UNC13BO14795 1591 aa13.76□□□□□ -0.21
LINC01888-201ENST00000415138 PRDM15P57071 1507 aaPredicted RBP13.76□□□□□ -0.21
LINC01888-201ENST00000415138 NUP155O75694 1391 aa13.76□□□□□ -0.21
LINC01888-201ENST00000415138 ZMYM3Q14202 1370 aa13.76□□□□□ -0.21
LINC01888-201ENST00000415138 CAMSAP1Q5T5Y3 1602 aa13.75□□□□□ -0.21
LINC01888-201ENST00000415138 CLSPNQ9HAW4 1339 aa13.75□□□□□ -0.21
LINC01888-201ENST00000415138 SETD1BQ9UPS6 1966 aaKnown RBP13.75□□□□□ -0.21
LINC01888-201ENST00000415138 CEBPAP49715 358 aaPredicted RBP13.75□□□□□ -0.21
LINC01888-201ENST00000415138 CABP2Q9NPB3 220 aa13.75□□□□□ -0.21
LINC01888-201ENST00000415138 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.75□□□□□ -0.21
LINC01888-201ENST00000415138 MROH1Q8NDA8 1641 aa13.74□□□□□ -0.21
LINC01888-201ENST00000415138 ABCC3O15438 1527 aa13.74□□□□□ -0.21
LINC01888-201ENST00000415138 IQGAP3Q86VI3 1631 aa13.72□□□□□ -0.21
LINC01888-201ENST00000415138 NEUROD1Q13562 356 aa13.72□□□□□ -0.21
LINC01888-201ENST00000415138 TET3O43151 1660 aa13.72□□□□□ -0.21
LINC01888-201ENST00000415138 RIOK3O14730 519 aaKnown RBP13.71□□□□□ -0.21
LINC01888-201ENST00000415138 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
LINC01888-201ENST00000415138 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.22
LINC01888-201ENST00000415138 SLAIN1Q8ND83 568 aa13.7□□□□□ -0.22
LINC01888-201ENST00000415138 PDCD7Q8N8D1 485 aaKnown RBP13.69□□□□□ -0.22
LINC01888-201ENST00000415138 VWDEQ8N2E2 1590 aa13.69□□□□□ -0.22
LINC01888-201ENST00000415138 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
LINC01888-201ENST00000415138 PREX1Q8TCU6 1659 aa13.69□□□□□ -0.22
LINC01888-201ENST00000415138 PZPP20742 1482 aa13.68□□□□□ -0.22
LINC01888-201ENST00000415138 FAM163AQ96GL9 167 aaPredicted RBP13.68□□□□□ -0.22
LINC01888-201ENST00000415138 L3MBTL3Q96JM7 780 aaPredicted RBP13.68□□□□□ -0.22
LINC01888-201ENST00000415138 NPATQ14207 1427 aa13.67□□□□□ -0.22
LINC01888-201ENST00000415138 EFCAB6Q5THR3 1501 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms