RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 NBR1Q14596 966 aa10.92□□□□□ -0.66
LINC00343-201ENST00000414368 ATP1B4Q9UN42 357 aaPredicted RBP10.92□□□□□ -0.66
LINC00343-201ENST00000414368 ZCCHC11Q5TAX3 1644 aaKnown RBP10.91□□□□□ -0.66
LINC00343-201ENST00000414368 KDM5BQ9UGL1 1544 aa10.9□□□□□ -0.66
LINC00343-201ENST00000414368 THSD4Q6ZMP0 1018 aa10.9□□□□□ -0.66
LINC00343-201ENST00000414368 FMN1Q68DA7 1419 aa10.9□□□□□ -0.66
LINC00343-201ENST00000414368 NUP153P49790 1475 aaKnown RBP10.89□□□□□ -0.67
LINC00343-201ENST00000414368 ATP10BO94823 1461 aa10.88□□□□□ -0.67
LINC00343-201ENST00000414368 TRAF7Q6Q0C0 670 aa10.88□□□□□ -0.67
LINC00343-201ENST00000414368 LAPTM4AQ15012 233 aa10.87□□□□□ -0.67
LINC00343-201ENST00000414368 KCNH8Q96L42 1107 aa10.87□□□□□ -0.67
LINC00343-201ENST00000414368 LRRIQ1Q96JM4 1722 aa10.87□□□□□ -0.67
LINC00343-201ENST00000414368 PCF11O94913 1555 aaKnown RBP10.86□□□□□ -0.67
LINC00343-201ENST00000414368 ASXL2Q76L83 1435 aa10.86□□□□□ -0.67
LINC00343-201ENST00000414368 PPP4R3BQ5MIZ7 849 aa10.86□□□□□ -0.67
LINC00343-201ENST00000414368 VPS9D1Q9Y2B5 631 aa10.86□□□□□ -0.67
LINC00343-201ENST00000414368 MAPKBP1O60336 1514 aa10.85□□□□□ -0.67
LINC00343-201ENST00000414368 CDK13Q14004 1512 aaKnown RBP10.85□□□□□ -0.67
LINC00343-201ENST00000414368 LCE2BO14633 110 aa10.85□□□□□ -0.67
LINC00343-201ENST00000414368 CASKIN1Q8WXD9 1431 aa10.84□□□□□ -0.67
LINC00343-201ENST00000414368 KCNK17Q96T54 332 aa10.84□□□□□ -0.67
LINC00343-201ENST00000414368 KIF13AQ9H1H9 1805 aa10.84□□□□□ -0.67
LINC00343-201ENST00000414368 HECW1Q76N89 1606 aa10.84□□□□□ -0.67
LINC00343-201ENST00000414368 KDM4FA0A1W2PPD8 638 aa10.83□□□□□ -0.68
LINC00343-201ENST00000414368 EPRSP07814 1512 aaKnown RBP10.83□□□□□ -0.68
LINC00343-201ENST00000414368 GOLGA8CPA6NN73 597 aa10.82□□□□□ -0.68
LINC00343-201ENST00000414368 PDE4AP27815 886 aa10.82□□□□□ -0.68
LINC00343-201ENST00000414368 FAM69CQ0P6D2 419 aa10.82□□□□□ -0.68
LINC00343-201ENST00000414368 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
LINC00343-201ENST00000414368 ABCC10Q5T3U5 1492 aa10.81□□□□□ -0.68
LINC00343-201ENST00000414368 WDR7Q9Y4E6 1490 aa10.81□□□□□ -0.68
LINC00343-201ENST00000414368 PLEKHD1A6NEE1 506 aa10.8□□□□□ -0.68
LINC00343-201ENST00000414368 TMC2Q8TDI7 906 aa10.8□□□□□ -0.68
LINC00343-201ENST00000414368 WNT2BQ93097 391 aa10.8□□□□□ -0.68
LINC00343-201ENST00000414368 VPS8Q8N3P4 1428 aa10.8□□□□□ -0.68
LINC00343-201ENST00000414368 DIP2BQ9P265 1576 aa10.8□□□□□ -0.68
LINC00343-201ENST00000414368 LARP6Q9BRS8 491 aaKnown RBP10.79□□□□□ -0.68
LINC00343-201ENST00000414368 TSPOAP1O95153 1857 aa10.78□□□□□ -0.68
LINC00343-201ENST00000414368 NCKAP5LQ9HCH0 1330 aa10.77□□□□□ -0.69
LINC00343-201ENST00000414368 CCDC18Q5T9S5 1454 aa10.76□□□□□ -0.69
LINC00343-201ENST00000414368 MAGI3Q5TCQ9 1506 aa10.76□□□□□ -0.69
LINC00343-201ENST00000414368 GFRA3O60609 400 aa10.76□□□□□ -0.69
LINC00343-201ENST00000414368 KCNV2Q8TDN2 545 aa10.76□□□□□ -0.69
LINC00343-201ENST00000414368 GLI2P10070 1586 aa10.75□□□□□ -0.69
LINC00343-201ENST00000414368 E2F4Q16254 413 aa10.75□□□□□ -0.69
LINC00343-201ENST00000414368 CRISPLD2Q9H0B8 497 aa10.75□□□□□ -0.69
LINC00343-201ENST00000414368 CDK11AQ9UQ88 783 aaPredicted RBP10.75□□□□□ -0.69
LINC00343-201ENST00000414368 DDX27Q96GQ7 796 aaKnown RBP10.74□□□□□ -0.69
LINC00343-201ENST00000414368 KIF14Q15058 1648 aa10.73□□□□□ -0.69
LINC00343-201ENST00000414368 BHMG1C9JSJ3 638 aaPredicted RBP10.73□□□□□ -0.69
LINC00343-201ENST00000414368 ITGBL1O95965 494 aaPredicted RBP10.73□□□□□ -0.69
LINC00343-201ENST00000414368 PTCD2Q8WV60 388 aaKnown RBP10.73□□□□□ -0.69
LINC00343-201ENST00000414368 SLC4A5Q9BY07 1137 aa10.73□□□□□ -0.69
LINC00343-201ENST00000414368 TROQ12816 1431 aaPredicted RBP10.73□□□□□ -0.69
LINC00343-201ENST00000414368 MAP3K4Q9Y6R4 1608 aa10.73□□□□□ -0.69
LINC00343-201ENST00000414368 ZNF787Q6DD87 383 aa10.72□□□□□ -0.69
LINC00343-201ENST00000414368 MRPL50Q8N5N7 158 aaKnown RBP10.72□□□□□ -0.69
LINC00343-201ENST00000414368 TIAM1Q13009 1591 aa10.72□□□□□ -0.69
LINC00343-201ENST00000414368 PPRC1Q5VV67 1664 aaKnown RBP10.72□□□□□ -0.69
LINC00343-201ENST00000414368 CFAP43Q8NDM7 1665 aa10.72□□□□□ -0.69
LINC00343-201ENST00000414368 MFSD10Q14728 455 aa10.71□□□□□ -0.69
LINC00343-201ENST00000414368 KANK4Q5T7N3 995 aaPredicted RBP10.71□□□□□ -0.69
LINC00343-201ENST00000414368 TTC37Q6PGP7 1564 aa10.71□□□□□ -0.69
LINC00343-201ENST00000414368 CD109Q6YHK3 1445 aa10.71□□□□□ -0.69
LINC00343-201ENST00000414368 ABCA9Q8IUA7 1624 aa10.71□□□□□ -0.69
LINC00343-201ENST00000414368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.71□□□□□ -0.69
LINC00343-201ENST00000414368 MTUS2Q5JR59 1369 aa10.7□□□□□ -0.7
LINC00343-201ENST00000414368 ARHGEF1Q92888 912 aaKnown RBP10.68□□□□□ -0.7
LINC00343-201ENST00000414368 ZNF775Q96BV0 537 aaPredicted RBP10.68□□□□□ -0.7
LINC00343-201ENST00000414368 GPHNQ9NQX3 736 aaPredicted RBP10.68□□□□□ -0.7
LINC00343-201ENST00000414368 PPP1R15BQ5SWA1 713 aa10.67□□□□□ -0.7
LINC00343-201ENST00000414368 PPARGC1BQ86YN6 1023 aaKnown RBP10.67□□□□□ -0.7
LINC00343-201ENST00000414368 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
LINC00343-201ENST00000414368 LRRC9Q6ZRR7 1453 aa10.67□□□□□ -0.7
LINC00343-201ENST00000414368 TPRNQ4KMQ1 711 aa10.66□□□□□ -0.7
LINC00343-201ENST00000414368 EHBP1L1Q8N3D4 1523 aa10.66□□□□□ -0.7
LINC00343-201ENST00000414368 MYO5CQ9NQX4 1742 aa10.65□□□□□ -0.7
LINC00343-201ENST00000414368 CDC42BPAQ5VT25 1732 aa10.64□□□□□ -0.71
LINC00343-201ENST00000414368 CDC42BPBQ9Y5S2 1711 aa10.64□□□□□ -0.71
LINC00343-201ENST00000414368 TBC1D12O60347 775 aa10.64□□□□□ -0.71
LINC00343-201ENST00000414368 PLCH2O75038 1416 aa10.64□□□□□ -0.71
LINC00343-201ENST00000414368 SUPT6HQ7KZ85 1726 aaKnown RBP10.64□□□□□ -0.71
LINC00343-201ENST00000414368 NCOA2Q15596 1464 aa10.63□□□□□ -0.71
LINC00343-201ENST00000414368 TEX14Q8IWB6 1497 aa10.63□□□□□ -0.71
LINC00343-201ENST00000414368 TULP1O00294 542 aaPredicted RBP10.63□□□□□ -0.71
LINC00343-201ENST00000414368 COL17A1Q9UMD9 1497 aaPredicted RBP10.62□□□□□ -0.71
LINC00343-201ENST00000414368 PRKCSHP14314 528 aaPredicted RBP10.62□□□□□ -0.71
LINC00343-201ENST00000414368 GPATCH8Q9UKJ3 1502 aaKnown RBP10.62□□□□□ -0.71
LINC00343-201ENST00000414368 CCNB3Q8WWL7 1395 aa10.62□□□□□ -0.71
LINC00343-201ENST00000414368 FANCAO15360 1455 aa10.61□□□□□ -0.71
LINC00343-201ENST00000414368 DSG2Q14126 1118 aa10.61□□□□□ -0.71
LINC00343-201ENST00000414368 EFCAB2Q5VUJ9 269 aa10.61□□□□□ -0.71
LINC00343-201ENST00000414368 ZNF777Q9ULD5 760 aaPredicted RBP10.61□□□□□ -0.71
LINC00343-201ENST00000414368 ARHGAP5Q13017 1502 aa10.61□□□□□ -0.71
LINC00343-201ENST00000414368 PREX2Q70Z35 1606 aa10.61□□□□□ -0.71
LINC00343-201ENST00000414368 KDM6BO15054 1643 aa10.6□□□□□ -0.71
LINC00343-201ENST00000414368 NRG2O14511 850 aaPredicted RBP10.6□□□□□ -0.71
LINC00343-201ENST00000414368 KCNC4Q03721 635 aa10.6□□□□□ -0.71
LINC00343-201ENST00000414368 NBPF3Q9H094 633 aa10.6□□□□□ -0.71
LINC00343-201ENST00000414368 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms