RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 EVI5O60447 810 aa9.77□□□□□ -0.85
NOD1-203ENST00000413433 MAP3K9P80192 1104 aa9.77□□□□□ -0.85
NOD1-203ENST00000413433 HIC1Q14526 733 aa9.77□□□□□ -0.85
NOD1-203ENST00000413433 NYAP1Q6ZVC0 841 aa9.77□□□□□ -0.85
NOD1-203ENST00000413433 PCMTD1Q96MG8 357 aaPredicted RBP9.77□□□□□ -0.85
NOD1-203ENST00000413433 PPP1R3GB7ZBB8 358 aa9.76□□□□□ -0.85
NOD1-203ENST00000413433 FCHSD2O94868 740 aa9.76□□□□□ -0.85
NOD1-203ENST00000413433 LAPTM4AQ15012 233 aa9.75□□□□□ -0.85
NOD1-203ENST00000413433 LAPTM4BQ86VI4 370 aa9.74□□□□□ -0.85
NOD1-203ENST00000413433 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
NOD1-203ENST00000413433 A6NJR5 290 aa9.73□□□□□ -0.85
NOD1-203ENST00000413433 KCNC4Q03721 635 aa9.73□□□□□ -0.85
NOD1-203ENST00000413433 CLUAP1Q96AJ1 413 aa9.73□□□□□ -0.85
NOD1-203ENST00000413433 SOWAHBA6NEL2 793 aa9.72□□□□□ -0.85
NOD1-203ENST00000413433 CCDC9Q9Y3X0 531 aaKnown RBP9.72□□□□□ -0.85
NOD1-203ENST00000413433 TRAK2O60296 914 aa9.71□□□□□ -0.86
NOD1-203ENST00000413433 ONECUT3O60422 494 aaPredicted RBP9.71□□□□□ -0.86
NOD1-203ENST00000413433 BCAMP50895 628 aa9.71□□□□□ -0.86
NOD1-203ENST00000413433 GIGYF2Q6Y7W6 1299 aaKnown RBP9.71□□□□□ -0.86
NOD1-203ENST00000413433 OSBPP22059 807 aa9.69□□□□□ -0.86
NOD1-203ENST00000413433 FECHP22830 423 aa9.69□□□□□ -0.86
NOD1-203ENST00000413433 PROX2Q3B8N5 592 aa9.69□□□□□ -0.86
NOD1-203ENST00000413433 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
NOD1-203ENST00000413433 DDX12PQ92771 950 aa9.67□□□□□ -0.86
NOD1-203ENST00000413433 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
NOD1-203ENST00000413433 PCDHGA10Q9Y5H3 936 aa9.67□□□□□ -0.86
NOD1-203ENST00000413433 MS4A1P11836 297 aa9.66□□□□□ -0.86
NOD1-203ENST00000413433 MCM6Q14566 821 aa9.66□□□□□ -0.86
NOD1-203ENST00000413433 FBXW7Q969H0 707 aa9.66□□□□□ -0.86
NOD1-203ENST00000413433 WBP1LQ9NX94 342 aa9.66□□□□□ -0.86
NOD1-203ENST00000413433 COL9A1P20849 921 aa9.65□□□□□ -0.86
NOD1-203ENST00000413433 TRAF7Q6Q0C0 670 aa9.65□□□□□ -0.86
NOD1-203ENST00000413433 RAD21O60216 631 aa9.64□□□□□ -0.87
NOD1-203ENST00000413433 SH3D19Q5HYK7 790 aa9.64□□□□□ -0.87
NOD1-203ENST00000413433 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
NOD1-203ENST00000413433 NCAPD3P42695 1498 aa9.64□□□□□ -0.87
NOD1-203ENST00000413433 ERCC6Q03468 1493 aa9.64□□□□□ -0.87
NOD1-203ENST00000413433 GFRA3O60609 400 aa9.63□□□□□ -0.87
NOD1-203ENST00000413433 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
NOD1-203ENST00000413433 PROSER2Q86WR7 435 aaPredicted RBP9.63□□□□□ -0.87
NOD1-203ENST00000413433 KIAA1468Q9P260 1216 aa9.63□□□□□ -0.87
NOD1-203ENST00000413433 PTGDRQ13258 359 aa9.62□□□□□ -0.87
NOD1-203ENST00000413433 ATAD2BQ9ULI0 1458 aa9.61□□□□□ -0.87
NOD1-203ENST00000413433 PHF14O94880 888 aa9.61□□□□□ -0.87
NOD1-203ENST00000413433 CLCN1P35523 988 aa9.61□□□□□ -0.87
NOD1-203ENST00000413433 TSR3Q9UJK0 312 aaKnown RBP9.6□□□□□ -0.87
NOD1-203ENST00000413433 ZNF777Q9ULD5 760 aaPredicted RBP9.6□□□□□ -0.87
NOD1-203ENST00000413433 LCE2BO14633 110 aa9.59□□□□□ -0.87
NOD1-203ENST00000413433 FAM98CQ17RN3 349 aaKnown RBP9.59□□□□□ -0.87
NOD1-203ENST00000413433 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.59□□□□□ -0.87
NOD1-203ENST00000413433 SERPINA10Q9UK55 444 aa9.59□□□□□ -0.87
NOD1-203ENST00000413433 NESP48681 1621 aa9.59□□□□□ -0.87
NOD1-203ENST00000413433 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
NOD1-203ENST00000413433 GPCPD1Q9NPB8 672 aa9.58□□□□□ -0.88
NOD1-203ENST00000413433 SEPT9Q9UHD8 586 aaPredicted RBP9.58□□□□□ -0.88
NOD1-203ENST00000413433 HPS5Q9UPZ3 1129 aa9.58□□□□□ -0.88
NOD1-203ENST00000413433 SKIV2LQ15477 1246 aaKnown RBP9.57□□□□□ -0.88
NOD1-203ENST00000413433 NECTIN2Q92692 538 aa9.57□□□□□ -0.88
NOD1-203ENST00000413433 LRCH3Q96II8 777 aa9.57□□□□□ -0.88
NOD1-203ENST00000413433 CUX2O14529 1486 aa9.56□□□□□ -0.88
NOD1-203ENST00000413433 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
NOD1-203ENST00000413433 MDM2Q00987 491 aaPredicted RBP9.56□□□□□ -0.88
NOD1-203ENST00000413433 TRIM6-TRIM34B2RNG4 842 aa9.55□□□□□ -0.88
NOD1-203ENST00000413433 NRG2O14511 850 aaPredicted RBP9.55□□□□□ -0.88
NOD1-203ENST00000413433 KCTD17Q8N5Z5 321 aa9.55□□□□□ -0.88
NOD1-203ENST00000413433 EPAS1Q99814 870 aa9.55□□□□□ -0.88
NOD1-203ENST00000413433 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
NOD1-203ENST00000413433 C6orf132Q5T0Z8 1188 aa9.54□□□□□ -0.88
NOD1-203ENST00000413433 RBM33Q96EV2 1170 aaKnown RBP9.53□□□□□ -0.88
NOD1-203ENST00000413433 TRAIPQ9BWF2 469 aa9.53□□□□□ -0.88
NOD1-203ENST00000413433 SMARCA4P51532 1647 aa9.53□□□□□ -0.88
NOD1-203ENST00000413433 SMARCA2P51531 1590 aa9.52□□□□□ -0.89
NOD1-203ENST00000413433 POM121Q96HA1 1249 aa9.52□□□□□ -0.89
NOD1-203ENST00000413433 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
NOD1-203ENST00000413433 PRKD2Q9BZL6 878 aa9.52□□□□□ -0.89
NOD1-203ENST00000413433 SPDYE5A6NIY4 337 aa9.51□□□□□ -0.89
NOD1-203ENST00000413433 TSR1Q2NL82 804 aaKnown RBP9.51□□□□□ -0.89
NOD1-203ENST00000413433 TMUB1Q9BVT8 246 aa9.51□□□□□ -0.89
NOD1-203ENST00000413433 BAZ1BQ9UIG0 1483 aaKnown RBP9.51□□□□□ -0.89
NOD1-203ENST00000413433 MAP3K7O43318 606 aa9.5□□□□□ -0.89
NOD1-203ENST00000413433 EN1Q05925 392 aaPredicted RBP9.5□□□□□ -0.89
NOD1-203ENST00000413433 AEBP1Q8IUX7 1158 aa9.5□□□□□ -0.89
NOD1-203ENST00000413433 FNBP4Q8N3X1 1017 aaPredicted RBP9.5□□□□□ -0.89
NOD1-203ENST00000413433 CDHR5Q9HBB8 845 aa9.5□□□□□ -0.89
NOD1-203ENST00000413433 POLR3EQ9NVU0 708 aa9.5□□□□□ -0.89
NOD1-203ENST00000413433 V9GY48 417 aaPredicted RBP9.5□□□□□ -0.89
NOD1-203ENST00000413433 PPP4CP60510 307 aa9.49□□□□□ -0.89
NOD1-203ENST00000413433 HMGXB3Q12766 1538 aa9.49□□□□□ -0.89
NOD1-203ENST00000413433 PROCA1Q8NCQ7 364 aaPredicted RBP9.48□□□□□ -0.89
NOD1-203ENST00000413433 MROH2BQ7Z745 1585 aa9.47□□□□□ -0.89
NOD1-203ENST00000413433 TJAP1Q5JTD0 557 aa9.47□□□□□ -0.89
NOD1-203ENST00000413433 ZNF787Q6DD87 383 aa9.47□□□□□ -0.89
NOD1-203ENST00000413433 ZNF330Q9Y3S2 320 aaPredicted RBP9.47□□□□□ -0.89
NOD1-203ENST00000413433 BAZ1AQ9NRL2 1556 aaPredicted RBP9.46□□□□□ -0.89
NOD1-203ENST00000413433 CLK2P49760 499 aaKnown RBP9.46□□□□□ -0.9
NOD1-203ENST00000413433 PACS2Q86VP3 889 aa9.46□□□□□ -0.9
NOD1-203ENST00000413433 FAM217BQ9NTX9 383 aaPredicted RBP9.46□□□□□ -0.9
NOD1-203ENST00000413433 COG6Q9Y2V7 657 aa9.46□□□□□ -0.9
NOD1-203ENST00000413433 WWC1Q8IX03 1113 aa9.45□□□□□ -0.9
NOD1-203ENST00000413433 IL21Q9HBE4 155 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms