RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
PCCA-204ENST00000413170 ADGRB3O60242 1522 aa20.32■□□□□ 0.84
PCCA-204ENST00000413170 SHPRHQ149N8 1683 aa20.32■□□□□ 0.84
PCCA-204ENST00000413170 CDK12Q9NYV4 1490 aaPredicted RBP20.31■□□□□ 0.84
PCCA-204ENST00000413170 ERBINQ96RT1 1412 aa20.31■□□□□ 0.84
PCCA-204ENST00000413170 NUTM2BA6NNL0 878 aaPredicted RBP20.31■□□□□ 0.84
PCCA-204ENST00000413170 NUTM2EB1AL46 878 aaPredicted RBP20.31■□□□□ 0.84
PCCA-204ENST00000413170 C14orf37Q86TY3 774 aa20.31■□□□□ 0.84
PCCA-204ENST00000413170 NUTM2AQ8IVF1 878 aaPredicted RBP20.31■□□□□ 0.84
PCCA-204ENST00000413170 RRP7BPQ9NSQ0 103 aa20.3■□□□□ 0.84
PCCA-204ENST00000413170 KANK1Q14678 1352 aa20.3■□□□□ 0.84
PCCA-204ENST00000413170 AHDC1Q5TGY3 1603 aaPredicted RBP20.3■□□□□ 0.84
PCCA-204ENST00000413170 AFF2P51816 1311 aa20.27■□□□□ 0.84
PCCA-204ENST00000413170 MYOM3Q5VTT5 1437 aa20.27■□□□□ 0.84
PCCA-204ENST00000413170 RGS12O14924 1447 aa20.26■□□□□ 0.83
PCCA-204ENST00000413170 CHD2O14647 1828 aaKnown RBP20.25■□□□□ 0.83
PCCA-204ENST00000413170 PLEKHG1Q9ULL1 1385 aa20.24■□□□□ 0.83
PCCA-204ENST00000413170 PPP1R15AO75807 674 aaPredicted RBP20.24■□□□□ 0.83
PCCA-204ENST00000413170 LMTK2Q8IWU2 1503 aa20.23■□□□□ 0.83
PCCA-204ENST00000413170 NOS1P29475 1434 aa20.23■□□□□ 0.83
PCCA-204ENST00000413170 DIP2AQ14689 1571 aa20.23■□□□□ 0.83
PCCA-204ENST00000413170 CADPS2Q86UW7 1296 aa20.23■□□□□ 0.83
PCCA-204ENST00000413170 ZFYVE9O95405 1425 aa20.22■□□□□ 0.83
PCCA-204ENST00000413170 NCOA3Q9Y6Q9 1424 aa20.22■□□□□ 0.83
PCCA-204ENST00000413170 ATF3P18847 181 aa20.22■□□□□ 0.83
PCCA-204ENST00000413170 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.22■□□□□ 0.83
PCCA-204ENST00000413170 NUTM2DQ5VT03 806 aaPredicted RBP20.21■□□□□ 0.83
PCCA-204ENST00000413170 CROCC2H7BZ55 1655 aa20.21■□□□□ 0.83
PCCA-204ENST00000413170 BRINP3Q76B58 766 aa20.2■□□□□ 0.82
PCCA-204ENST00000413170 ABCC5O15440 1437 aa20.19■□□□□ 0.82
PCCA-204ENST00000413170 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
PCCA-204ENST00000413170 C19orf44Q9H6X5 657 aa20.19■□□□□ 0.82
PCCA-204ENST00000413170 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
PCCA-204ENST00000413170 C8orf37Q96NL8 207 aa20.18■□□□□ 0.82
PCCA-204ENST00000413170 KANK4Q5T7N3 995 aaPredicted RBP20.17■□□□□ 0.82
PCCA-204ENST00000413170 QTRT2Q9H974 415 aaKnown RBP20.17■□□□□ 0.82
PCCA-204ENST00000413170 RBM6P78332 1123 aaKnown RBP20.16■□□□□ 0.82
PCCA-204ENST00000413170 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
PCCA-204ENST00000413170 MYO5BQ9ULV0 1848 aa20.16■□□□□ 0.82
PCCA-204ENST00000413170 GCC2Q8IWJ2 1684 aa20.14■□□□□ 0.81
PCCA-204ENST00000413170 ASXL1Q8IXJ9 1541 aa20.14■□□□□ 0.81
PCCA-204ENST00000413170 DAPK1P53355 1430 aa20.13■□□□□ 0.81
PCCA-204ENST00000413170 ADAMTS13Q76LX8 1427 aa20.12■□□□□ 0.81
PCCA-204ENST00000413170 SETD5Q9C0A6 1442 aa20.12■□□□□ 0.81
PCCA-204ENST00000413170 HDGFP51858 240 aaKnown RBP20.12■□□□□ 0.81
PCCA-204ENST00000413170 CHIC2Q9UKJ5 165 aa20.12■□□□□ 0.81
PCCA-204ENST00000413170 ATAD2Q6PL18 1390 aa20.11■□□□□ 0.81
PCCA-204ENST00000413170 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
PCCA-204ENST00000413170 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
PCCA-204ENST00000413170 ANKRD30AQ9BXX3 1397 aa20.09■□□□□ 0.81
PCCA-204ENST00000413170 PTPN23Q9H3S7 1636 aa20.09■□□□□ 0.81
PCCA-204ENST00000413170 SETBP1Q9Y6X0 1596 aa20.09■□□□□ 0.81
PCCA-204ENST00000413170 CHGAP10645 457 aaKnown RBP20.09■□□□□ 0.81
PCCA-204ENST00000413170 VPS8Q8N3P4 1428 aa20.09■□□□□ 0.81
PCCA-204ENST00000413170 PNPLA6Q8IY17 1366 aa20.08■□□□□ 0.8
PCCA-204ENST00000413170 RPRD2Q5VT52 1461 aaKnown RBP20.07■□□□□ 0.8
PCCA-204ENST00000413170 NHSL1Q5SYE7 1610 aa20.07■□□□□ 0.8
PCCA-204ENST00000413170 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.07■□□□□ 0.8
PCCA-204ENST00000413170 DDX17Q92841 729 aaKnown RBP20.07■□□□□ 0.8
PCCA-204ENST00000413170 LRRC59Q96AG4 307 aaKnown RBP20.07■□□□□ 0.8
PCCA-204ENST00000413170 PIK3R4Q99570 1358 aa20.07■□□□□ 0.8
PCCA-204ENST00000413170 ADAMTS2O95450 1211 aa20.06■□□□□ 0.8
PCCA-204ENST00000413170 DCCP43146 1447 aa20.06■□□□□ 0.8
PCCA-204ENST00000413170 NGLY1Q96IV0 654 aa20.06■□□□□ 0.8
PCCA-204ENST00000413170 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
PCCA-204ENST00000413170 MST1RQ04912 1400 aa20.05■□□□□ 0.8
PCCA-204ENST00000413170 PTPRUQ92729 1446 aa20.05■□□□□ 0.8
PCCA-204ENST00000413170 TRPM2O94759 1503 aa20.05■□□□□ 0.8
PCCA-204ENST00000413170 EP400Q96L91 3159 aa20.03■□□□□ 0.8
PCCA-204ENST00000413170 USP21Q9UK80 565 aa19.99■□□□□ 0.79
PCCA-204ENST00000413170 UNC13BO14795 1591 aa19.97■□□□□ 0.79
PCCA-204ENST00000413170 TRPC5Q9UL62 973 aaPredicted RBP19.97■□□□□ 0.79
PCCA-204ENST00000413170 XRN1Q8IZH2 1706 aaKnown RBP19.96■□□□□ 0.79
PCCA-204ENST00000413170 ANKRD50Q9ULJ7 1429 aa19.93■□□□□ 0.78
PCCA-204ENST00000413170 ADGRL2O95490 1459 aa19.93■□□□□ 0.78
PCCA-204ENST00000413170 ATRNO75882 1429 aa19.93■□□□□ 0.78
PCCA-204ENST00000413170 ADGRL3Q9HAR2 1447 aa19.93■□□□□ 0.78
PCCA-204ENST00000413170 NRXN3Q9Y4C0 1643 aa19.91■□□□□ 0.78
PCCA-204ENST00000413170 CCDC125Q86Z20 511 aa19.9■□□□□ 0.78
PCCA-204ENST00000413170 E9PCH4 1651 aa19.89■□□□□ 0.77
PCCA-204ENST00000413170 METP08581 1390 aa19.89■□□□□ 0.77
PCCA-204ENST00000413170 NALCNQ8IZF0 1738 aa19.89■□□□□ 0.77
PCCA-204ENST00000413170 FNBP4Q8N3X1 1017 aaPredicted RBP19.89■□□□□ 0.77
PCCA-204ENST00000413170 C1orf167Q5SNV9 1468 aa19.88■□□□□ 0.77
PCCA-204ENST00000413170 PTCH1Q13635 1447 aa19.88■□□□□ 0.77
PCCA-204ENST00000413170 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
PCCA-204ENST00000413170 SOS2Q07890 1332 aaPredicted RBP19.84■□□□□ 0.77
PCCA-204ENST00000413170 LAMC1P11047 1609 aa19.84■□□□□ 0.77
PCCA-204ENST00000413170 ORAI2Q96SN7 254 aa19.83■□□□□ 0.77
PCCA-204ENST00000413170 BCL9LQ86UU0 1499 aa19.82■□□□□ 0.76
PCCA-204ENST00000413170 APLP2Q06481 763 aa19.82■□□□□ 0.76
PCCA-204ENST00000413170 FAM50AQ14320 339 aaKnown RBP19.82■□□□□ 0.76
PCCA-204ENST00000413170 DEFB132Q7Z7B7 95 aa19.81■□□□□ 0.76
PCCA-204ENST00000413170 BLMP54132 1417 aaPredicted RBP19.81■□□□□ 0.76
PCCA-204ENST00000413170 ZNF326Q5BKZ1 582 aaKnown RBP19.8■□□□□ 0.76
PCCA-204ENST00000413170 LRP5O75197 1615 aa19.8■□□□□ 0.76
PCCA-204ENST00000413170 COL22A1Q8NFW1 1626 aaPredicted RBP19.8■□□□□ 0.76
PCCA-204ENST00000413170 MYOM2P54296 1465 aa19.79■□□□□ 0.76
PCCA-204ENST00000413170 GJD4Q96KN9 370 aaPredicted RBP19.79■□□□□ 0.76
PCCA-204ENST00000413170 IQGAP3Q86VI3 1631 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms