RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 LMTK2Q8IWU2 1503 aa15.35■□□□□ 0.05
TRAFD1-202ENST00000412615 MYOM2P54296 1465 aa15.35■□□□□ 0.05
TRAFD1-202ENST00000412615 CFAP74Q9C0B2 1584 aa15.35■□□□□ 0.05
TRAFD1-202ENST00000412615 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.04
TRAFD1-202ENST00000412615 SYNMO15061 1565 aa15.33■□□□□ 0.04
TRAFD1-202ENST00000412615 MAP3K4Q9Y6R4 1608 aa15.33■□□□□ 0.04
TRAFD1-202ENST00000412615 POGZQ7Z3K3 1410 aa15.32■□□□□ 0.04
TRAFD1-202ENST00000412615 CFAP70Q5T0N1 1121 aa15.32■□□□□ 0.04
TRAFD1-202ENST00000412615 UGGT1Q9NYU2 1555 aa15.32■□□□□ 0.04
TRAFD1-202ENST00000412615 KIF1BO60333 1816 aa15.31■□□□□ 0.04
TRAFD1-202ENST00000412615 BLMP54132 1417 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-202ENST00000412615 SALL2Q9Y467 1007 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-202ENST00000412615 PPRC1Q5VV67 1664 aaKnown RBP15.31■□□□□ 0.04
TRAFD1-202ENST00000412615 ADGRF5Q8IZF2 1346 aa15.31■□□□□ 0.04
TRAFD1-202ENST00000412615 AMER1Q5JTC6 1135 aaPredicted RBP15.31■□□□□ 0.04
TRAFD1-202ENST00000412615 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
TRAFD1-202ENST00000412615 RCAN3Q9UKA8 241 aa15.3■□□□□ 0.04
TRAFD1-202ENST00000412615 PPP2R1AP30153 589 aa15.29■□□□□ 0.04
TRAFD1-202ENST00000412615 NPC1L1Q9UHC9 1359 aa15.29■□□□□ 0.04
TRAFD1-202ENST00000412615 RRP1P56182 461 aaKnown RBP15.29■□□□□ 0.04
TRAFD1-202ENST00000412615 ASXL1Q8IXJ9 1541 aa15.28■□□□□ 0.04
TRAFD1-202ENST00000412615 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
TRAFD1-202ENST00000412615 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
TRAFD1-202ENST00000412615 NRXN1Q9ULB1 1477 aa15.28■□□□□ 0.04
TRAFD1-202ENST00000412615 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
TRAFD1-202ENST00000412615 GGT6Q6P531 493 aa15.28■□□□□ 0.04
TRAFD1-202ENST00000412615 HECW2Q9P2P5 1572 aa15.27■□□□□ 0.04
TRAFD1-202ENST00000412615 IFT172Q9UG01 1749 aa15.26■□□□□ 0.03
TRAFD1-202ENST00000412615 NPATQ14207 1427 aa15.26■□□□□ 0.03
TRAFD1-202ENST00000412615 CHGAP10645 457 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-202ENST00000412615 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
TRAFD1-202ENST00000412615 ADAMTS8Q9UP79 889 aa15.26■□□□□ 0.03
TRAFD1-202ENST00000412615 FRMPD1Q5SYB0 1578 aa15.26■□□□□ 0.03
TRAFD1-202ENST00000412615 KDM5AP29375 1690 aaKnown RBP15.26■□□□□ 0.03
TRAFD1-202ENST00000412615 ADGRB3O60242 1522 aa15.25■□□□□ 0.03
TRAFD1-202ENST00000412615 NEO1Q92859 1461 aa15.25■□□□□ 0.03
TRAFD1-202ENST00000412615 CDCA7LQ96GN5 454 aa15.25■□□□□ 0.03
TRAFD1-202ENST00000412615 SBNO2Q9Y2G9 1366 aa15.24■□□□□ 0.03
TRAFD1-202ENST00000412615 PIK3C2GO75747 1445 aa15.24■□□□□ 0.03
TRAFD1-202ENST00000412615 NOS1P29475 1434 aa15.24■□□□□ 0.03
TRAFD1-202ENST00000412615 MROH2AA6NES4 1674 aa15.24■□□□□ 0.03
TRAFD1-202ENST00000412615 ERVK-7P63135 1459 aa15.24■□□□□ 0.03
TRAFD1-202ENST00000412615 RPGRIP1LQ68CZ1 1315 aa15.24■□□□□ 0.03
TRAFD1-202ENST00000412615 MYOM1P52179 1685 aa15.23■□□□□ 0.03
TRAFD1-202ENST00000412615 SETBP1Q9Y6X0 1596 aa15.22■□□□□ 0.03
TRAFD1-202ENST00000412615 C14orf93Q9H972 538 aaKnown RBP15.21■□□□□ 0.03
TRAFD1-202ENST00000412615 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.03
TRAFD1-202ENST00000412615 ABCC3O15438 1527 aa15.21■□□□□ 0.02
TRAFD1-202ENST00000412615 MYO3AQ8NEV4 1616 aa15.21■□□□□ 0.02
TRAFD1-202ENST00000412615 RAPGEF3O95398 923 aa15.2■□□□□ 0.02
TRAFD1-202ENST00000412615 EXOC6Q8TAG9 804 aa15.19■□□□□ 0.02
TRAFD1-202ENST00000412615 TRAK1Q9UPV9 953 aa15.17■□□□□ 0.02
TRAFD1-202ENST00000412615 PPLO60437 1756 aa15.17■□□□□ 0.02
TRAFD1-202ENST00000412615 CARD14Q9BXL6 1004 aa15.17■□□□□ 0.02
TRAFD1-202ENST00000412615 MSH5O43196 834 aa15.16■□□□□ 0.02
TRAFD1-202ENST00000412615 CAMSAP1Q5T5Y3 1602 aa15.15■□□□□ 0.02
TRAFD1-202ENST00000412615 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
TRAFD1-202ENST00000412615 ADGRB1O14514 1584 aa15.14■□□□□ 0.01
TRAFD1-202ENST00000412615 DIP2CQ9Y2E4 1556 aa15.14■□□□□ 0.01
TRAFD1-202ENST00000412615 ARHGAP31Q2M1Z3 1444 aa15.14■□□□□ 0.01
TRAFD1-202ENST00000412615 GOLGA2Q08379 1002 aa15.14■□□□□ 0.01
TRAFD1-202ENST00000412615 PLEKHH1Q9ULM0 1364 aa15.14■□□□□ 0.01
TRAFD1-202ENST00000412615 CFAP65Q6ZU64 1925 aaKnown RBP15.14■□□□□ 0.01
TRAFD1-202ENST00000412615 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
TRAFD1-202ENST00000412615 TMEM132EQ6IEE7 984 aa15.13■□□□□ 0.01
TRAFD1-202ENST00000412615 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
TRAFD1-202ENST00000412615 PIK3C2BO00750 1634 aa15.11■□□□□ 0.01
TRAFD1-202ENST00000412615 NGEFQ8N5V2 710 aa15.11■□□□□ 0.01
TRAFD1-202ENST00000412615 PUS7Q96PZ0 661 aaKnown RBP15.11■□□□□ 0.01
TRAFD1-202ENST00000412615 SLC52A1Q9NWF4 448 aa15.11■□□□□ 0.01
TRAFD1-202ENST00000412615 PLIN1O60240 522 aa15.1■□□□□ 0.01
TRAFD1-202ENST00000412615 RICTORQ6R327 1708 aa15.1■□□□□ 0.01
TRAFD1-202ENST00000412615 SIGLEC1Q9BZZ2 1709 aa15.1■□□□□ 0.01
TRAFD1-202ENST00000412615 ZC3H13Q5T200 1668 aaKnown RBP15.1■□□□□ 0.01
TRAFD1-202ENST00000412615 QRICH2Q9H0J4 1663 aa15.1■□□□□ 0.01
TRAFD1-202ENST00000412615 ERICH6Q7L0X2 663 aa15.1■□□□□ 0.01
TRAFD1-202ENST00000412615 POLR3AO14802 1390 aaPredicted RBP15.09■□□□□ 0.01
TRAFD1-202ENST00000412615 SLFN5Q08AF3 891 aa15.09■□□□□ 0.01
TRAFD1-202ENST00000412615 IDI1Q13907 227 aa15.09■□□□□ 0.01
TRAFD1-202ENST00000412615 CCDC146Q8IYE0 955 aa15.09■□□□□ 0.01
TRAFD1-202ENST00000412615 SLC12A5Q9H2X9 1139 aa15.09■□□□□ 0.01
TRAFD1-202ENST00000412615 NSD3Q9BZ95 1437 aa15.09■□□□□ 0.01
TRAFD1-202ENST00000412615 NEXMIFQ5QGS0 1516 aa15.08■□□□□ 0.01
TRAFD1-202ENST00000412615 APAF1O14727 1248 aa15.08■□□□□ 0
TRAFD1-202ENST00000412615 MORC1Q86VD1 984 aa15.08■□□□□ 0
TRAFD1-202ENST00000412615 TCERG1O14776 1098 aaKnown RBP15.08■□□□□ 0
TRAFD1-202ENST00000412615 CRBNQ96SW2 442 aa15.08■□□□□ 0
TRAFD1-202ENST00000412615 EVC2Q86UK5 1308 aa15.08■□□□□ 0
TRAFD1-202ENST00000412615 YEATS2Q9ULM3 1422 aa15.08■□□□□ 0
TRAFD1-202ENST00000412615 ZFYVE9O95405 1425 aa15.07■□□□□ 0
TRAFD1-202ENST00000412615 GLI2P10070 1586 aa15.07■□□□□ 0
TRAFD1-202ENST00000412615 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.07■□□□□ 0
TRAFD1-202ENST00000412615 NUTM2DQ5VT03 806 aaPredicted RBP15.07■□□□□ 0
TRAFD1-202ENST00000412615 TRMT2AQ8IZ69 625 aaKnown RBP15.07■□□□□ 0
TRAFD1-202ENST00000412615 CYB5RLQ6IPT4 315 aa15.06■□□□□ 0
TRAFD1-202ENST00000412615 CGNL1Q0VF96 1302 aa15.04■□□□□ -0
TRAFD1-202ENST00000412615 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
TRAFD1-202ENST00000412615 E9PSI1 815 aa15.04■□□□□ -0
TRAFD1-202ENST00000412615 MS4A1P11836 297 aa15.02■□□□□ -0
TRAFD1-202ENST00000412615 USP32Q8NFA0 1604 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms