RNA–Protein interactions for RNA: ENST00000412050.8

CPEB3-202, Transcript of cytoplasmic polyadenylation element binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CPEB3, Length 7,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3-202ENST00000412050 VPS37DQ86XT2 251 aa13.09□□□□□ -0.31
CPEB3-202ENST00000412050 CA8P35219 290 aa13.09□□□□□ -0.31
CPEB3-202ENST00000412050 UQCRHP07919 91 aa13.08□□□□□ -0.31
CPEB3-202ENST00000412050 CSRNP3Q8WYN3 585 aa13.08□□□□□ -0.31
CPEB3-202ENST00000412050 COMMD10Q9Y6G5 202 aa13.08□□□□□ -0.31
CPEB3-202ENST00000412050 SPAG9O60271 1321 aaKnown RBP13.08□□□□□ -0.32
CPEB3-202ENST00000412050 AMOTL1Q8IY63 956 aa13.08□□□□□ -0.32
CPEB3-202ENST00000412050 PPM1EQ8WY54 764 aa13.08□□□□□ -0.32
CPEB3-202ENST00000412050 KIF20AO95235 890 aa13.08□□□□□ -0.32
CPEB3-202ENST00000412050 RBM28Q9NW13 759 aaKnown RBP13.08□□□□□ -0.32
CPEB3-202ENST00000412050 SYNE3Q6ZMZ3 975 aa13.07□□□□□ -0.32
CPEB3-202ENST00000412050 GOLGA6L10A0A0M3HER8 536 aa13.07□□□□□ -0.32
CPEB3-202ENST00000412050 GOLGA6L10A6NI86 522 aa13.07□□□□□ -0.32
CPEB3-202ENST00000412050 TAF3Q5VWG9 929 aa13.07□□□□□ -0.32
CPEB3-202ENST00000412050 OFD1O75665 1012 aa13.06□□□□□ -0.32
CPEB3-202ENST00000412050 SEPT8Q92599 483 aa13.06□□□□□ -0.32
CPEB3-202ENST00000412050 EVA1CP58658 441 aa13.06□□□□□ -0.32
CPEB3-202ENST00000412050 BANK1Q8NDB2 785 aa13.06□□□□□ -0.32
CPEB3-202ENST00000412050 TRIM29Q14134 588 aa13.06□□□□□ -0.32
CPEB3-202ENST00000412050 INCENPQ9NQS7 918 aa13.06□□□□□ -0.32
CPEB3-202ENST00000412050 MTMR7Q9Y216 660 aa13.06□□□□□ -0.32
CPEB3-202ENST00000412050 ANKRD20A12PQ8NF67 263 aa13.05□□□□□ -0.32
CPEB3-202ENST00000412050 CCDC47Q96A33 483 aaKnown RBP13.05□□□□□ -0.32
CPEB3-202ENST00000412050 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
CPEB3-202ENST00000412050 ST18O60284 1047 aa13.05□□□□□ -0.32
CPEB3-202ENST00000412050 RBM25P49756 843 aaKnown RBP13.05□□□□□ -0.32
CPEB3-202ENST00000412050 STK31Q9BXU1 1019 aa13.05□□□□□ -0.32
CPEB3-202ENST00000412050 SERPINA10Q9UK55 444 aa13.05□□□□□ -0.32
CPEB3-202ENST00000412050 TAX1BP1Q86VP1 789 aa13.05□□□□□ -0.32
CPEB3-202ENST00000412050 GTPBP4Q9BZE4 634 aaKnown RBP13.05□□□□□ -0.32
CPEB3-202ENST00000412050 GIMAP7Q8NHV1 300 aa13.04□□□□□ -0.32
CPEB3-202ENST00000412050 MYO6Q9UM54 1294 aa13.04□□□□□ -0.32
CPEB3-202ENST00000412050 CHMP4BP1P59074 171 aa13.04□□□□□ -0.32
CPEB3-202ENST00000412050 IKQ13123 557 aaPredicted RBP13.04□□□□□ -0.32
CPEB3-202ENST00000412050 CCDC112Q8NEF3 446 aa13.04□□□□□ -0.32
CPEB3-202ENST00000412050 FAM13BQ9NYF5 915 aa13.04□□□□□ -0.32
CPEB3-202ENST00000412050 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
CPEB3-202ENST00000412050 CAGE1Q8TC20 777 aa13.04□□□□□ -0.32
CPEB3-202ENST00000412050 KDM4AO75164 1064 aa13.03□□□□□ -0.32
CPEB3-202ENST00000412050 BMS1Q14692 1282 aaKnown RBP13.03□□□□□ -0.32
CPEB3-202ENST00000412050 FYB1O15117 783 aa13.03□□□□□ -0.32
CPEB3-202ENST00000412050 STAMBPO95630 424 aa13.03□□□□□ -0.32
CPEB3-202ENST00000412050 SYTL4Q96C24 671 aaPredicted RBP13.03□□□□□ -0.32
CPEB3-202ENST00000412050 SETD1BQ9UPS6 1966 aaKnown RBP13.03□□□□□ -0.32
CPEB3-202ENST00000412050 TIGD1Q96MW7 591 aa13.02□□□□□ -0.32
CPEB3-202ENST00000412050 EIF3JO75822 258 aaKnown RBP13.02□□□□□ -0.32
CPEB3-202ENST00000412050 NOP2P46087 812 aaKnown RBP13.02□□□□□ -0.33
CPEB3-202ENST00000412050 ATXN8OSP0DMR3 200 aa13.02□□□□□ -0.33
CPEB3-202ENST00000412050 SYCP1Q15431 976 aa13.02□□□□□ -0.33
CPEB3-202ENST00000412050 GBP2P32456 591 aaPredicted RBP13.02□□□□□ -0.33
CPEB3-202ENST00000412050 SMC4Q9NTJ3 1288 aa13.02□□□□□ -0.33
CPEB3-202ENST00000412050 MRPS9P82933 396 aaKnown RBP13.01□□□□□ -0.33
CPEB3-202ENST00000412050 NUTM2FA1L443 756 aa13.01□□□□□ -0.33
CPEB3-202ENST00000412050 U2AF1L5P0DN76 240 aaPredicted RBP13.01□□□□□ -0.33
CPEB3-202ENST00000412050 U2AF1Q01081 240 aaKnown RBP eCLIP13.01□□□□□ -0.33
CPEB3-202ENST00000412050 MRVI1Q9Y6F6 885 aa13.01□□□□□ -0.33
CPEB3-202ENST00000412050 TMF1P82094 1093 aa13.01□□□□□ -0.33
CPEB3-202ENST00000412050 DCAF11Q8TEB1 546 aa13.01□□□□□ -0.33
CPEB3-202ENST00000412050 SMC1AQ14683 1233 aaKnown RBP13□□□□□ -0.33
CPEB3-202ENST00000412050 PPP1R9BQ96SB3 815 aa13□□□□□ -0.33
CPEB3-202ENST00000412050 HOOK1Q9UJC3 728 aaKnown RBP13□□□□□ -0.33
CPEB3-202ENST00000412050 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
CPEB3-202ENST00000412050 PLEKHD1A6NEE1 506 aa12.99□□□□□ -0.33
CPEB3-202ENST00000412050 HDGFP51858 240 aaKnown RBP12.99□□□□□ -0.33
CPEB3-202ENST00000412050 PDILTQ8N807 584 aa12.99□□□□□ -0.33
CPEB3-202ENST00000412050 TTC36A6NLP5 189 aa12.99□□□□□ -0.33
CPEB3-202ENST00000412050 RGS22Q8NE09 1264 aa12.99□□□□□ -0.33
CPEB3-202ENST00000412050 RWDD1Q9H446 243 aaPredicted RBP12.98□□□□□ -0.33
CPEB3-202ENST00000412050 HDGFL2Q7Z4V5 671 aaPredicted RBP12.98□□□□□ -0.33
CPEB3-202ENST00000412050 TCERG1O14776 1098 aaKnown RBP12.98□□□□□ -0.33
CPEB3-202ENST00000412050 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.33
CPEB3-202ENST00000412050 TMCO4Q5TGY1 634 aa12.97□□□□□ -0.33
CPEB3-202ENST00000412050 CLUAP1Q96AJ1 413 aa12.97□□□□□ -0.33
CPEB3-202ENST00000412050 LETM1O95202 739 aaPredicted RBP12.97□□□□□ -0.33
CPEB3-202ENST00000412050 DDX49Q9Y6V7 483 aaKnown RBP12.97□□□□□ -0.33
CPEB3-202ENST00000412050 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
CPEB3-202ENST00000412050 HSP90B2PQ58FF3 399 aa12.97□□□□□ -0.33
CPEB3-202ENST00000412050 SCRIBQ14160 1630 aa12.97□□□□□ -0.33
CPEB3-202ENST00000412050 ANAPC15P60006 121 aa12.96□□□□□ -0.33
CPEB3-202ENST00000412050 GOLGA6L7A0A1B0GV03 622 aa12.96□□□□□ -0.34
CPEB3-202ENST00000412050 PABPN1LA6NDY0 278 aaKnown RBP12.96□□□□□ -0.34
CPEB3-202ENST00000412050 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.34
CPEB3-202ENST00000412050 TICAM2Q86XR7 235 aa12.96□□□□□ -0.34
CPEB3-202ENST00000412050 PMFBP1Q8TBY8 1022 aa12.95□□□□□ -0.34
CPEB3-202ENST00000412050 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.95□□□□□ -0.34
CPEB3-202ENST00000412050 DRC1Q96MC2 740 aa12.95□□□□□ -0.34
CPEB3-202ENST00000412050 FAM184BQ9ULE4 1060 aa12.95□□□□□ -0.34
CPEB3-202ENST00000412050 ERICH2A1L162 156 aa12.95□□□□□ -0.34
CPEB3-202ENST00000412050 FAM161AQ3B820 660 aa12.95□□□□□ -0.34
CPEB3-202ENST00000412050 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
CPEB3-202ENST00000412050 NECTIN2Q92692 538 aa12.95□□□□□ -0.34
CPEB3-202ENST00000412050 RFX1P22670 979 aa12.94□□□□□ -0.34
CPEB3-202ENST00000412050 AMPHP49418 695 aa12.94□□□□□ -0.34
CPEB3-202ENST00000412050 LEKR1Q6ZMV7 388 aa12.94□□□□□ -0.34
CPEB3-202ENST00000412050 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
CPEB3-202ENST00000412050 CCDC39Q9UFE4 941 aa12.94□□□□□ -0.34
CPEB3-202ENST00000412050 NUCB2P80303 420 aa12.94□□□□□ -0.34
CPEB3-202ENST00000412050 ACBD3Q9H3P7 528 aa12.94□□□□□ -0.34
CPEB3-202ENST00000412050 IFT57Q9NWB7 429 aa12.94□□□□□ -0.34
CPEB3-202ENST00000412050 CCDC27Q2M243 656 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms