RNA–Protein interactions for RNA: ENST00000411042.1

RN7SKP228-201, Transcript of RNA, 7SK small nuclear pseudogene 228, humanhuman

BASIC

Gene RN7SKP228, Length 263 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP228-201ENST00000411042 SLC52A1Q9NWF4 448 aa14.77□□□□□ -0.05
RN7SKP228-201ENST00000411042 CARD11Q9BXL7 1154 aa14.76□□□□□ -0.05
RN7SKP228-201ENST00000411042 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
RN7SKP228-201ENST00000411042 ROCK2O75116 1388 aaKnown RBP14.75□□□□□ -0.05
RN7SKP228-201ENST00000411042 CCDC7Q96M83 1385 aa14.75□□□□□ -0.05
RN7SKP228-201ENST00000411042 PIK3C2BO00750 1634 aa14.75□□□□□ -0.05
RN7SKP228-201ENST00000411042 DDX10Q13206 875 aaKnown RBP14.75□□□□□ -0.05
RN7SKP228-201ENST00000411042 RGL3Q3MIN7 710 aa14.75□□□□□ -0.05
RN7SKP228-201ENST00000411042 COL17A1Q9UMD9 1497 aaPredicted RBP14.75□□□□□ -0.05
RN7SKP228-201ENST00000411042 WASHC2AQ641Q2 1341 aa14.74□□□□□ -0.05
RN7SKP228-201ENST00000411042 KDM2AQ9Y2K7 1162 aa14.74□□□□□ -0.05
RN7SKP228-201ENST00000411042 ADGRB3O60242 1522 aa14.74□□□□□ -0.05
RN7SKP228-201ENST00000411042 NRXN1Q9ULB1 1477 aa14.73□□□□□ -0.05
RN7SKP228-201ENST00000411042 MADDQ8WXG6 1647 aa14.73□□□□□ -0.05
RN7SKP228-201ENST00000411042 CCER2I3L3R5 266 aa14.72□□□□□ -0.05
RN7SKP228-201ENST00000411042 IFT172Q9UG01 1749 aa14.72□□□□□ -0.05
RN7SKP228-201ENST00000411042 ZNF326Q5BKZ1 582 aaKnown RBP14.71□□□□□ -0.05
RN7SKP228-201ENST00000411042 ZFYVE9O95405 1425 aa14.7□□□□□ -0.06
RN7SKP228-201ENST00000411042 ANP32CO43423 234 aa14.69□□□□□ -0.06
RN7SKP228-201ENST00000411042 HIRIP3Q9BW71 556 aaPredicted RBP14.69□□□□□ -0.06
RN7SKP228-201ENST00000411042 SYNMO15061 1565 aa14.68□□□□□ -0.06
RN7SKP228-201ENST00000411042 PREX1Q8TCU6 1659 aa14.68□□□□□ -0.06
RN7SKP228-201ENST00000411042 KIF7Q2M1P5 1343 aa14.67□□□□□ -0.06
RN7SKP228-201ENST00000411042 SIGLEC1Q9BZZ2 1709 aa14.67□□□□□ -0.06
RN7SKP228-201ENST00000411042 PPLO60437 1756 aa14.66□□□□□ -0.06
RN7SKP228-201ENST00000411042 SETBP1Q9Y6X0 1596 aa14.66□□□□□ -0.06
RN7SKP228-201ENST00000411042 CENPBP07199 599 aaPredicted RBP14.66□□□□□ -0.06
RN7SKP228-201ENST00000411042 ERVK-7P63135 1459 aa14.65□□□□□ -0.06
RN7SKP228-201ENST00000411042 SCAF11Q99590 1463 aaKnown RBP14.65□□□□□ -0.06
RN7SKP228-201ENST00000411042 EIF3AQ14152 1382 aaKnown RBP14.65□□□□□ -0.06
RN7SKP228-201ENST00000411042 CFAP65Q6ZU64 1925 aaKnown RBP14.65□□□□□ -0.06
RN7SKP228-201ENST00000411042 ST20-MTHFSA0A0A6YYL1 179 aa14.65□□□□□ -0.06
RN7SKP228-201ENST00000411042 C11orf95C9JLR9 678 aaPredicted RBP14.65□□□□□ -0.06
RN7SKP228-201ENST00000411042 VGFO15240 615 aaPredicted RBP14.65□□□□□ -0.06
RN7SKP228-201ENST00000411042 SPATA31D1Q6ZQQ2 1576 aa14.64□□□□□ -0.07
RN7SKP228-201ENST00000411042 UGGT1Q9NYU2 1555 aa14.64□□□□□ -0.07
RN7SKP228-201ENST00000411042 NBPF1Q3BBV0 1214 aa14.64□□□□□ -0.07
RN7SKP228-201ENST00000411042 IQGAP1P46940 1657 aa14.64□□□□□ -0.07
RN7SKP228-201ENST00000411042 MROH2AA6NES4 1674 aa14.63□□□□□ -0.07
RN7SKP228-201ENST00000411042 PIK3C2GO75747 1445 aa14.62□□□□□ -0.07
RN7SKP228-201ENST00000411042 CDCA8Q53HL2 280 aa14.62□□□□□ -0.07
RN7SKP228-201ENST00000411042 KTN1Q86UP2 1357 aaKnown RBP14.61□□□□□ -0.07
RN7SKP228-201ENST00000411042 SBNO2Q9Y2G9 1366 aa14.61□□□□□ -0.07
RN7SKP228-201ENST00000411042 IDI1Q13907 227 aa14.61□□□□□ -0.07
RN7SKP228-201ENST00000411042 TESK2Q96S53 571 aa14.61□□□□□ -0.07
RN7SKP228-201ENST00000411042 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
RN7SKP228-201ENST00000411042 TMEM131LA2VDJ0 1609 aa14.6□□□□□ -0.07
RN7SKP228-201ENST00000411042 KDM4FA0A1W2PPD8 638 aa14.6□□□□□ -0.07
RN7SKP228-201ENST00000411042 C14orf93Q9H972 538 aaKnown RBP14.6□□□□□ -0.07
RN7SKP228-201ENST00000411042 KDM5AP29375 1690 aaKnown RBP14.6□□□□□ -0.07
RN7SKP228-201ENST00000411042 CLTCQ00610 1675 aaKnown RBP14.59□□□□□ -0.07
RN7SKP228-201ENST00000411042 TMF1P82094 1093 aa14.59□□□□□ -0.07
RN7SKP228-201ENST00000411042 ESF1Q9H501 851 aaKnown RBP14.59□□□□□ -0.07
RN7SKP228-201ENST00000411042 FBXO3Q9UK99 471 aa14.59□□□□□ -0.07
RN7SKP228-201ENST00000411042 NEXMIFQ5QGS0 1516 aa14.59□□□□□ -0.07
RN7SKP228-201ENST00000411042 ADGRF5Q8IZF2 1346 aa14.58□□□□□ -0.08
RN7SKP228-201ENST00000411042 ZMYM3Q14202 1370 aa14.57□□□□□ -0.08
RN7SKP228-201ENST00000411042 MYO3AQ8NEV4 1616 aa14.56□□□□□ -0.08
RN7SKP228-201ENST00000411042 PUS7Q96PZ0 661 aaKnown RBP14.56□□□□□ -0.08
RN7SKP228-201ENST00000411042 CHGAP10645 457 aaKnown RBP14.54□□□□□ -0.08
RN7SKP228-201ENST00000411042 HDGFP51858 240 aaKnown RBP14.54□□□□□ -0.08
RN7SKP228-201ENST00000411042 PRKRIP1Q9H875 184 aaPredicted RBP14.54□□□□□ -0.08
RN7SKP228-201ENST00000411042 ADGRB1O14514 1584 aa14.54□□□□□ -0.08
RN7SKP228-201ENST00000411042 CFAP70Q5T0N1 1121 aa14.53□□□□□ -0.08
RN7SKP228-201ENST00000411042 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.52□□□□□ -0.09
RN7SKP228-201ENST00000411042 A2ML1A8K2U0 1454 aa14.51□□□□□ -0.09
RN7SKP228-201ENST00000411042 NLRP1Q9C000 1473 aa14.51□□□□□ -0.09
RN7SKP228-201ENST00000411042 FBXO31Q5XUX0 539 aaPredicted RBP14.51□□□□□ -0.09
RN7SKP228-201ENST00000411042 TNRQ92752 1358 aa14.49□□□□□ -0.09
RN7SKP228-201ENST00000411042 RALBP1Q15311 655 aa14.49□□□□□ -0.09
RN7SKP228-201ENST00000411042 MYO5BQ9ULV0 1848 aa14.49□□□□□ -0.09
RN7SKP228-201ENST00000411042 DISP3Q9P2K9 1392 aa14.48□□□□□ -0.09
RN7SKP228-201ENST00000411042 CENPJQ9HC77 1338 aaPredicted RBP14.47□□□□□ -0.09
RN7SKP228-201ENST00000411042 STAG3Q9UJ98 1225 aa14.47□□□□□ -0.09
RN7SKP228-201ENST00000411042 PER1O15534 1290 aaPredicted RBP14.46□□□□□ -0.09
RN7SKP228-201ENST00000411042 MLECQ14165 292 aa14.46□□□□□ -0.09
RN7SKP228-201ENST00000411042 NPC1L1Q9UHC9 1359 aa14.46□□□□□ -0.1
RN7SKP228-201ENST00000411042 SPDYE4A6NLX3 237 aa14.45□□□□□ -0.1
RN7SKP228-201ENST00000411042 RIMS2Q9UQ26 1411 aa14.45□□□□□ -0.1
RN7SKP228-201ENST00000411042 DLC1Q96QB1 1528 aa14.43□□□□□ -0.1
RN7SKP228-201ENST00000411042 SIRT1Q96EB6 747 aa14.43□□□□□ -0.1
RN7SKP228-201ENST00000411042 ALKQ9UM73 1620 aa14.42□□□□□ -0.1
RN7SKP228-201ENST00000411042 FER1L4A9Z1Z3 1794 aa14.42□□□□□ -0.1
RN7SKP228-201ENST00000411042 BRD4O60885 1362 aaPredicted RBP14.41□□□□□ -0.1
RN7SKP228-201ENST00000411042 UBR1Q8IWV7 1749 aa14.41□□□□□ -0.1
RN7SKP228-201ENST00000411042 ARHGEF28Q8N1W1 1705 aaKnown RBP14.41□□□□□ -0.1
RN7SKP228-201ENST00000411042 PARD3Q8TEW0 1356 aa14.4□□□□□ -0.1
RN7SKP228-201ENST00000411042 TMEM2Q9UHN6 1383 aa14.4□□□□□ -0.1
RN7SKP228-201ENST00000411042 NINLQ9Y2I6 1382 aa14.4□□□□□ -0.1
RN7SKP228-201ENST00000411042 C3P01024 1663 aa14.39□□□□□ -0.11
RN7SKP228-201ENST00000411042 QRICH2Q9H0J4 1663 aa14.39□□□□□ -0.11
RN7SKP228-201ENST00000411042 ABCC11Q96J66 1382 aa14.39□□□□□ -0.11
RN7SKP228-201ENST00000411042 YTHDC1Q96MU7 727 aaKnown RBP14.39□□□□□ -0.11
RN7SKP228-201ENST00000411042 POLR3GLQ9BT43 218 aa14.39□□□□□ -0.11
RN7SKP228-201ENST00000411042 YTHDC2Q9H6S0 1430 aaKnown RBP14.39□□□□□ -0.11
RN7SKP228-201ENST00000411042 MYBBP1AQ9BQG0 1328 aaKnown RBP14.39□□□□□ -0.11
RN7SKP228-201ENST00000411042 SETD1BQ9UPS6 1966 aaKnown RBP14.38□□□□□ -0.11
RN7SKP228-201ENST00000411042 INSRP06213 1382 aa14.38□□□□□ -0.11
RN7SKP228-201ENST00000411042 LRPPRCP42704 1394 aaKnown RBP14.38□□□□□ -0.11
RN7SKP228-201ENST00000411042 ASXL1Q8IXJ9 1541 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms