RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 MYOM3Q5VTT5 1437 aa3.74□□□□□ -1.81
RNU4-53P-201ENST00000410828 BRINP3Q76B58 766 aa3.74□□□□□ -1.81
RNU4-53P-201ENST00000410828 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.74□□□□□ -1.81
RNU4-53P-201ENST00000410828 LRRC59Q96AG4 307 aaKnown RBP3.74□□□□□ -1.81
RNU4-53P-201ENST00000410828 ROBO1Q9Y6N7 1651 aa3.74□□□□□ -1.81
RNU4-53P-201ENST00000410828 EFCAB6Q5THR3 1501 aa3.74□□□□□ -1.81
RNU4-53P-201ENST00000410828 PLEKHG1Q9ULL1 1385 aa3.74□□□□□ -1.81
RNU4-53P-201ENST00000410828 LRP6O75581 1613 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 ARHGEF5Q12774 1597 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 ERBINQ96RT1 1412 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 CHGAP10645 457 aaKnown RBP3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 CCDC125Q86Z20 511 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 C8orf37Q96NL8 207 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 AMOTL2Q9Y2J4 779 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 TET3O43151 1660 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 DUOX2Q9NRD8 1548 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 ATAD2Q6PL18 1390 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 PIK3R4Q99570 1358 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 SETD1AO15047 1707 aaKnown RBP3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 UBR1Q8IWV7 1749 aa3.73□□□□□ -1.81
RNU4-53P-201ENST00000410828 NOS1P29475 1434 aa3.72□□□□□ -1.81
RNU4-53P-201ENST00000410828 ADAMTS2O95450 1211 aa3.72□□□□□ -1.81
RNU4-53P-201ENST00000410828 KANK4Q5T7N3 995 aaPredicted RBP3.72□□□□□ -1.81
RNU4-53P-201ENST00000410828 CHIC2Q9UKJ5 165 aa3.72□□□□□ -1.81
RNU4-53P-201ENST00000410828 ANKRD30AQ9BXX3 1397 aa3.72□□□□□ -1.81
RNU4-53P-201ENST00000410828 MAST1Q9Y2H9 1570 aa3.72□□□□□ -1.81
RNU4-53P-201ENST00000410828 RGS12O14924 1447 aa3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 ABCC5O15440 1437 aa3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 SETD5Q9C0A6 1442 aa3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 RIMS2Q9UQ26 1411 aa3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 COL16A1Q07092 1604 aaPredicted RBP3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 MROH1Q8NDA8 1641 aa3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 EIF2AK4Q9P2K8 1649 aaKnown RBP3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 PHLPP1O60346 1717 aa3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 USP21Q9UK80 565 aa3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 TRPC5Q9UL62 973 aaPredicted RBP3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 XIRP1Q702N8 1843 aaKnown RBP3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 CFAP65Q6ZU64 1925 aaKnown RBP3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 NWD1Q149M9 1564 aa3.71□□□□□ -1.82
RNU4-53P-201ENST00000410828 ZFYVE9O95405 1425 aa3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 DCCP43146 1447 aa3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 ADAMTS13Q76LX8 1427 aa3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 LMTK2Q8IWU2 1503 aa3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 PIK3C2BO00750 1634 aa3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 AHDC1Q5TGY3 1603 aaPredicted RBP3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 APLP2Q06481 763 aa3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 FNBP4Q8N3X1 1017 aaPredicted RBP3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 PNPLA6Q8IY17 1366 aa3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 ADGRB3O60242 1522 aa3.7□□□□□ -1.82
RNU4-53P-201ENST00000410828 RPRD2Q5VT52 1461 aaKnown RBP3.69□□□□□ -1.82
RNU4-53P-201ENST00000410828 SF3B2Q13435 895 aaKnown RBP3.69□□□□□ -1.82
RNU4-53P-201ENST00000410828 DDX17Q92841 729 aaKnown RBP3.69□□□□□ -1.82
RNU4-53P-201ENST00000410828 DAPK1P53355 1430 aa3.69□□□□□ -1.82
RNU4-53P-201ENST00000410828 MST1RQ04912 1400 aa3.69□□□□□ -1.82
RNU4-53P-201ENST00000410828 VPS8Q8N3P4 1428 aa3.69□□□□□ -1.82
RNU4-53P-201ENST00000410828 SOS2Q07890 1332 aaPredicted RBP3.69□□□□□ -1.82
RNU4-53P-201ENST00000410828 KDM5AP29375 1690 aaKnown RBP3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 CEP152O94986 1710 aa3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 GJD4Q96KN9 370 aaPredicted RBP3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 ASXL1Q8IXJ9 1541 aa3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 PTCH1Q13635 1447 aa3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 PTPRUQ92729 1446 aa3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 ANKRD50Q9ULJ7 1429 aa3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 SHPRHQ149N8 1683 aa3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 DIP2AQ14689 1571 aa3.68□□□□□ -1.82
RNU4-53P-201ENST00000410828 ZNF326Q5BKZ1 582 aaKnown RBP3.67□□□□□ -1.82
RNU4-53P-201ENST00000410828 DEFB132Q7Z7B7 95 aa3.67□□□□□ -1.82
RNU4-53P-201ENST00000410828 ORAI2Q96SN7 254 aa3.67□□□□□ -1.82
RNU4-53P-201ENST00000410828 ATRNO75882 1429 aa3.67□□□□□ -1.82
RNU4-53P-201ENST00000410828 BLMP54132 1417 aaPredicted RBP3.67□□□□□ -1.82
RNU4-53P-201ENST00000410828 SETBP1Q9Y6X0 1596 aa3.67□□□□□ -1.82
RNU4-53P-201ENST00000410828 METP08581 1390 aa3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 TRPM2O94759 1503 aa3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 CHD2O14647 1828 aaKnown RBP3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 FAM50AQ14320 339 aaKnown RBP3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 UNC5CLQ8IV45 518 aa3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 ADGRL3Q9HAR2 1447 aa3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 NPHP3Q7Z494 1330 aa3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 C1orf167Q5SNV9 1468 aa3.66□□□□□ -1.82
RNU4-53P-201ENST00000410828 PSDA5PKW4 1024 aaPredicted RBP3.65□□□□□ -1.83
RNU4-53P-201ENST00000410828 FOXO3O43524 673 aa3.65□□□□□ -1.83
RNU4-53P-201ENST00000410828 HRCP23327 699 aa3.65□□□□□ -1.83
RNU4-53P-201ENST00000410828 BAG6P46379 1132 aa3.65□□□□□ -1.83
RNU4-53P-201ENST00000410828 ESCO1Q5FWF5 840 aa3.65□□□□□ -1.83
RNU4-53P-201ENST00000410828 SEPT12Q8IYM1 358 aa3.65□□□□□ -1.83
RNU4-53P-201ENST00000410828 ADGRL2O95490 1459 aa3.65□□□□□ -1.83
RNU4-53P-201ENST00000410828 BCL9LQ86UU0 1499 aa3.65□□□□□ -1.83
RNU4-53P-201ENST00000410828 NUP155O75694 1391 aa3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 LRPPRCP42704 1394 aaKnown RBP3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 TMEM131LA2VDJ0 1609 aa3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 A0A0G2JS52 829 aa3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 LOC105371045A0A1W2PR82 267 aa3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 VGFO15240 615 aaPredicted RBP3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 ONECUT3O60422 494 aaPredicted RBP3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 HAP1P54257 671 aaPredicted RBP3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 MYT1Q01538 1121 aa3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 XPCQ01831 940 aaPredicted RBP3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 KRT27Q7Z3Y8 459 aa3.64□□□□□ -1.83
RNU4-53P-201ENST00000410828 CCDC9Q9Y3X0 531 aaKnown RBP3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms