RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 ADGRF5Q8IZF2 1346 aa24.53■■□□□ 1.52
LRPPRC-203ENST00000409946 SCAF1Q9H7N4 1312 aaKnown RBP24.53■■□□□ 1.52
LRPPRC-203ENST00000409946 STAC3Q96MF2 364 aa24.51■■□□□ 1.51
LRPPRC-203ENST00000409946 PPP6R1Q9UPN7 881 aa24.51■■□□□ 1.51
LRPPRC-203ENST00000409946 IDI1Q13907 227 aa24.5■■□□□ 1.51
LRPPRC-203ENST00000409946 ARID4BQ4LE39 1312 aaPredicted RBP24.5■■□□□ 1.51
LRPPRC-203ENST00000409946 NRXN1Q9ULB1 1477 aa24.49■■□□□ 1.51
LRPPRC-203ENST00000409946 TMEM131LA2VDJ0 1609 aa24.49■■□□□ 1.51
LRPPRC-203ENST00000409946 NEXMIFQ5QGS0 1516 aa24.47■■□□□ 1.51
LRPPRC-203ENST00000409946 YTHDC1Q96MU7 727 aaKnown RBP24.47■■□□□ 1.51
LRPPRC-203ENST00000409946 POLR3GLQ9BT43 218 aa24.47■■□□□ 1.51
LRPPRC-203ENST00000409946 SPATA31D1Q6ZQQ2 1576 aa24.46■■□□□ 1.51
LRPPRC-203ENST00000409946 CFAP70Q5T0N1 1121 aa24.45■■□□□ 1.5
LRPPRC-203ENST00000409946 ANP32CO43423 234 aa24.44■■□□□ 1.5
LRPPRC-203ENST00000409946 SLC52A1Q9NWF4 448 aa24.44■■□□□ 1.5
LRPPRC-203ENST00000409946 NUTM2DQ5VT03 806 aaPredicted RBP24.42■■□□□ 1.5
LRPPRC-203ENST00000409946 RPGRIP1LQ68CZ1 1315 aa24.41■■□□□ 1.5
LRPPRC-203ENST00000409946 PIK3C2GO75747 1445 aa24.41■■□□□ 1.5
LRPPRC-203ENST00000409946 SCAF11Q99590 1463 aaKnown RBP24.41■■□□□ 1.5
LRPPRC-203ENST00000409946 ESF1Q9H501 851 aaKnown RBP24.4■■□□□ 1.5
LRPPRC-203ENST00000409946 ZMYM3Q14202 1370 aa24.4■■□□□ 1.5
LRPPRC-203ENST00000409946 TESK2Q96S53 571 aa24.39■■□□□ 1.49
LRPPRC-203ENST00000409946 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
LRPPRC-203ENST00000409946 SETBP1Q9Y6X0 1596 aa24.35■■□□□ 1.49
LRPPRC-203ENST00000409946 FER1L4A9Z1Z3 1794 aa24.34■■□□□ 1.49
LRPPRC-203ENST00000409946 SENP3Q9H4L4 574 aaPredicted RBP24.32■■□□□ 1.48
LRPPRC-203ENST00000409946 ADGRB1O14514 1584 aa24.32■■□□□ 1.48
LRPPRC-203ENST00000409946 C14orf93Q9H972 538 aaKnown RBP24.31■■□□□ 1.48
LRPPRC-203ENST00000409946 STAG3Q9UJ98 1225 aa24.31■■□□□ 1.48
LRPPRC-203ENST00000409946 A2ML1A8K2U0 1454 aa24.3■■□□□ 1.48
LRPPRC-203ENST00000409946 VGFO15240 615 aaPredicted RBP24.3■■□□□ 1.48
LRPPRC-203ENST00000409946 C3P01024 1663 aa24.29■■□□□ 1.48
LRPPRC-203ENST00000409946 EIF3AQ14152 1382 aaKnown RBP24.28■■□□□ 1.48
LRPPRC-203ENST00000409946 ZFYVE9O95405 1425 aa24.28■■□□□ 1.48
LRPPRC-203ENST00000409946 MYO3AQ8NEV4 1616 aa24.28■■□□□ 1.48
LRPPRC-203ENST00000409946 CCER2I3L3R5 266 aa24.27■■□□□ 1.48
LRPPRC-203ENST00000409946 TMEM132EQ6IEE7 984 aa24.27■■□□□ 1.48
LRPPRC-203ENST00000409946 TMF1P82094 1093 aa24.26■■□□□ 1.47
LRPPRC-203ENST00000409946 TNRQ92752 1358 aa24.25■■□□□ 1.47
LRPPRC-203ENST00000409946 ASXL1Q8IXJ9 1541 aa24.24■■□□□ 1.47
LRPPRC-203ENST00000409946 CEBPAP49715 358 aaPredicted RBP24.24■■□□□ 1.47
LRPPRC-203ENST00000409946 QRICH2Q9H0J4 1663 aa24.23■■□□□ 1.47
LRPPRC-203ENST00000409946 ARHGEF28Q8N1W1 1705 aaKnown RBP24.23■■□□□ 1.47
LRPPRC-203ENST00000409946 PRKRIP1Q9H875 184 aaPredicted RBP24.23■■□□□ 1.47
LRPPRC-203ENST00000409946 UBR1Q8IWV7 1749 aa24.22■■□□□ 1.47
LRPPRC-203ENST00000409946 CNGB1Q14028 1251 aaPredicted RBP24.22■■□□□ 1.47
LRPPRC-203ENST00000409946 TRAK1Q9UPV9 953 aa24.21■■□□□ 1.47
LRPPRC-203ENST00000409946 RIMS2Q9UQ26 1411 aa24.21■■□□□ 1.47
LRPPRC-203ENST00000409946 KDM5AP29375 1690 aaKnown RBP24.2■■□□□ 1.46
LRPPRC-203ENST00000409946 PLPPR3Q6T4P5 718 aa24.19■■□□□ 1.46
LRPPRC-203ENST00000409946 MYOM1P52179 1685 aa24.19■■□□□ 1.46
LRPPRC-203ENST00000409946 GTF3C3Q9Y5Q9 886 aa24.19■■□□□ 1.46
LRPPRC-203ENST00000409946 ALKQ9UM73 1620 aa24.18■■□□□ 1.46
LRPPRC-203ENST00000409946 SETD1AO15047 1707 aaKnown RBP24.16■■□□□ 1.46
LRPPRC-203ENST00000409946 CENPJQ9HC77 1338 aaPredicted RBP24.15■■□□□ 1.46
LRPPRC-203ENST00000409946 RIMS1Q86UR5 1692 aaKnown RBP24.15■■□□□ 1.46
LRPPRC-203ENST00000409946 CCDC184Q52MB2 194 aa24.14■■□□□ 1.46
LRPPRC-203ENST00000409946 NRXN3Q9Y4C0 1643 aa24.14■■□□□ 1.45
LRPPRC-203ENST00000409946 PTPRMP28827 1452 aa24.11■■□□□ 1.45
LRPPRC-203ENST00000409946 SBNO2Q9Y2G9 1366 aa24.11■■□□□ 1.45
LRPPRC-203ENST00000409946 STK26Q9P289 416 aa24.1■■□□□ 1.45
LRPPRC-203ENST00000409946 NLRP1Q9C000 1473 aa24.1■■□□□ 1.45
LRPPRC-203ENST00000409946 PANK3Q9H999 370 aa24.1■■□□□ 1.45
LRPPRC-203ENST00000409946 CDCA8Q53HL2 280 aa24.08■■□□□ 1.45
LRPPRC-203ENST00000409946 YTHDC2Q9H6S0 1430 aaKnown RBP24.07■■□□□ 1.44
LRPPRC-203ENST00000409946 PER1O15534 1290 aaPredicted RBP24.07■■□□□ 1.44
LRPPRC-203ENST00000409946 ADAMTSL3P82987 1691 aa24.06■■□□□ 1.44
LRPPRC-203ENST00000409946 TMEM2Q9UHN6 1383 aa24.06■■□□□ 1.44
LRPPRC-203ENST00000409946 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.04■■□□□ 1.44
LRPPRC-203ENST00000409946 TULP4Q9NRJ4 1543 aa24.04■■□□□ 1.44
LRPPRC-203ENST00000409946 SAFB2Q14151 953 aaKnown RBP eCLIP24.03■■□□□ 1.44
LRPPRC-203ENST00000409946 MRS2Q9HD23 443 aa24.03■■□□□ 1.44
LRPPRC-203ENST00000409946 SLC24A1O60721 1099 aa24.01■■□□□ 1.43
LRPPRC-203ENST00000409946 KTN1Q86UP2 1357 aaKnown RBP23.99■■□□□ 1.43
LRPPRC-203ENST00000409946 CC2D1BQ5T0F9 858 aaKnown RBP23.98■■□□□ 1.43
LRPPRC-203ENST00000409946 PRAM1Q96QH2 718 aa23.97■■□□□ 1.43
LRPPRC-203ENST00000409946 METP08581 1390 aa23.97■■□□□ 1.43
LRPPRC-203ENST00000409946 PARD3Q8TEW0 1356 aa23.97■■□□□ 1.43
LRPPRC-203ENST00000409946 LTKP29376 864 aa23.96■■□□□ 1.43
LRPPRC-203ENST00000409946 HDGFP51858 240 aaKnown RBP23.96■■□□□ 1.43
LRPPRC-203ENST00000409946 LRPPRCP42704 1394 aaKnown RBP23.95■■□□□ 1.42
LRPPRC-203ENST00000409946 BCANQ96GW7 911 aa23.95■■□□□ 1.42
LRPPRC-203ENST00000409946 SLIT1O75093 1534 aa23.95■■□□□ 1.42
LRPPRC-203ENST00000409946 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.42
LRPPRC-203ENST00000409946 DLC1Q96QB1 1528 aa23.94■■□□□ 1.42
LRPPRC-203ENST00000409946 RALBP1Q15311 655 aa23.94■■□□□ 1.42
LRPPRC-203ENST00000409946 KNDC1Q76NI1 1749 aa23.94■■□□□ 1.42
LRPPRC-203ENST00000409946 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
LRPPRC-203ENST00000409946 POGKQ9P215 609 aa23.94■■□□□ 1.42
LRPPRC-203ENST00000409946 MINK1Q8N4C8 1332 aaPredicted RBP23.93■■□□□ 1.42
LRPPRC-203ENST00000409946 MYBBP1AQ9BQG0 1328 aaKnown RBP23.93■■□□□ 1.42
LRPPRC-203ENST00000409946 FAM9BQ8IZU0 186 aa23.93■■□□□ 1.42
LRPPRC-203ENST00000409946 EVC2Q86UK5 1308 aa23.93■■□□□ 1.42
LRPPRC-203ENST00000409946 ADAMTS13Q76LX8 1427 aa23.92■■□□□ 1.42
LRPPRC-203ENST00000409946 TXNDC2Q86VQ3 553 aa23.91■■□□□ 1.42
LRPPRC-203ENST00000409946 KNSTRNQ9Y448 316 aa23.91■■□□□ 1.42
LRPPRC-203ENST00000409946 PLEKHG1Q9ULL1 1385 aa23.91■■□□□ 1.42
LRPPRC-203ENST00000409946 PLEKHH1Q9ULM0 1364 aa23.9■■□□□ 1.42
LRPPRC-203ENST00000409946 CABP2Q9NPB3 220 aa23.9■■□□□ 1.42
LRPPRC-203ENST00000409946 WAPLQ7Z5K2 1190 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms